RNA–Protein interactions for RNA: ENST00000526506.5

HIF3A-210, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-210ENST00000526506 LINC00158P58513 81 aa9.22□□□□□ -0.93
HIF3A-210ENST00000526506 REG3GQ6UW15 175 aa9.22□□□□□ -0.93
HIF3A-210ENST00000526506 PLEKHB2Q96CS7 222 aa9.22□□□□□ -0.93
HIF3A-210ENST00000526506 PKHD1L1Q86WI1 4243 aa9.22□□□□□ -0.93
HIF3A-210ENST00000526506 MYMXA0A1B0GTQ4 84 aa9.21□□□□□ -0.94
HIF3A-210ENST00000526506 MEIG1Q5JSS6 88 aa9.21□□□□□ -0.94
HIF3A-210ENST00000526506 A0A0U1RRA0 63 aa9.2□□□□□ -0.94
HIF3A-210ENST00000526506 LINC00587B1AMM8 73 aa9.2□□□□□ -0.94
HIF3A-210ENST00000526506 TSPEAR-AS2P59090 65 aa9.2□□□□□ -0.94
HIF3A-210ENST00000526506 LINC00167Q96N53 147 aa9.2□□□□□ -0.94
HIF3A-210ENST00000526506 GAGE10A6NGK3 116 aa9.19□□□□□ -0.94
HIF3A-210ENST00000526506 J3QQQ9 107 aa9.19□□□□□ -0.94
HIF3A-210ENST00000526506 SMIM13P0DJ93 91 aa9.19□□□□□ -0.94
HIF3A-210ENST00000526506 RPL24P83731 157 aaKnown RBP9.19□□□□□ -0.94
HIF3A-210ENST00000526506 PET117Q6UWS5 81 aa9.19□□□□□ -0.94
HIF3A-210ENST00000526506 DIRC1Q969H9 104 aa9.19□□□□□ -0.94
HIF3A-210ENST00000526506 LINC01600Q96MT4 127 aa9.19□□□□□ -0.94
HIF3A-210ENST00000526506 RPL37AP8A6NKH3 93 aa9.18□□□□□ -0.94
HIF3A-210ENST00000526506 MT1HL1P0DM35 61 aa9.18□□□□□ -0.94
HIF3A-210ENST00000526506 VPREB1P12018 145 aa9.18□□□□□ -0.94
HIF3A-210ENST00000526506 LGALS3P17931 250 aaKnown RBP9.18□□□□□ -0.94
HIF3A-210ENST00000526506 LINC01545Q5VT33 79 aa9.18□□□□□ -0.94
HIF3A-210ENST00000526506 FAT3Q8TDW7 4589 aa9.17□□□□□ -0.94
HIF3A-210ENST00000526506 NMUP48645 174 aa9.17□□□□□ -0.94
HIF3A-210ENST00000526506 C3orf79P0CE67 100 aa9.16□□□□□ -0.94
HIF3A-210ENST00000526506 KRTDAPP60985 99 aa9.16□□□□□ -0.94
HIF3A-210ENST00000526506 MIR7-3HGQ8N6C7 128 aa9.16□□□□□ -0.94
HIF3A-210ENST00000526506 E9PLD3 99 aa9.15□□□□□ -0.94
HIF3A-210ENST00000526506 H0Y9J4 135 aa9.15□□□□□ -0.94
HIF3A-210ENST00000526506 Q8NDZ9 215 aa9.15□□□□□ -0.94
HIF3A-210ENST00000526506 IGKV2-28A0A075B6P5 120 aa9.14□□□□□ -0.95
HIF3A-210ENST00000526506 BCE1O60756 84 aa9.14□□□□□ -0.95
HIF3A-210ENST00000526506 IGKV2D-28P01615 120 aa9.14□□□□□ -0.95
HIF3A-210ENST00000526506 ZNF861PO60384 105 aa9.13□□□□□ -0.95
HIF3A-210ENST00000526506 BOD1L2Q8IYS8 172 aa9.13□□□□□ -0.95
HIF3A-210ENST00000526506 IGLV1-50A0A075B6I6 118 aa9.12□□□□□ -0.95
HIF3A-210ENST00000526506 C20orf202A1L168 122 aa9.12□□□□□ -0.95
HIF3A-210ENST00000526506 RPL28P46779 137 aaKnown RBP9.12□□□□□ -0.95
HIF3A-210ENST00000526506 DAND5Q8N907 189 aa9.1□□□□□ -0.95
HIF3A-210ENST00000526506 A0A0J9YXY3 114 aa9.09□□□□□ -0.95
HIF3A-210ENST00000526506 M0R378 163 aa9.09□□□□□ -0.95
HIF3A-210ENST00000526506 KRTAP10-8P60410 259 aa9.09□□□□□ -0.95
HIF3A-210ENST00000526506 IGKV2D-26A0A0A0MRZ7 120 aa9.08□□□□□ -0.96
HIF3A-210ENST00000526506 LOC107984156A0A0G2JMH3 177 aa9.08□□□□□ -0.96
HIF3A-210ENST00000526506 TMEM238C9JI98 176 aa9.08□□□□□ -0.96
HIF3A-210ENST00000526506 S100A2P29034 98 aa9.08□□□□□ -0.96
HIF3A-210ENST00000526506 UBE2AP49459 152 aa9.08□□□□□ -0.96
HIF3A-210ENST00000526506 ARL17AQ8IVW1 177 aa9.08□□□□□ -0.96
HIF3A-210ENST00000526506 HIST3H2BBQ8N257 126 aa9.08□□□□□ -0.96
HIF3A-210ENST00000526506 TMEM126AQ9H061 195 aa9.08□□□□□ -0.96
HIF3A-210ENST00000526506 NCR3O14931 201 aa9.07□□□□□ -0.96
HIF3A-210ENST00000526506 S100A6P06703 90 aa9.07□□□□□ -0.96
HIF3A-210ENST00000526506 AKR1D1P51857 326 aa9.07□□□□□ -0.96
HIF3A-210ENST00000526506 MIEN1Q9BRT3 115 aa9.07□□□□□ -0.96
HIF3A-210ENST00000526506 KRTAP1-4P0C5Y4 121 aa9.06□□□□□ -0.96
HIF3A-210ENST00000526506 KRTAP13-1Q8IUC0 172 aa9.06□□□□□ -0.96
HIF3A-210ENST00000526506 HIST1H2BLQ99880 126 aa9.06□□□□□ -0.96
HIF3A-210ENST00000526506 ZNF815PA8K554 130 aa9.05□□□□□ -0.96
HIF3A-210ENST00000526506 UBR4Q5T4S7 5183 aa9.04□□□□□ -0.96
HIF3A-210ENST00000526506 PRLHP81277 87 aa9.04□□□□□ -0.96
HIF3A-210ENST00000526506 ADAMTSL4-AS1Q5T5F5 129 aa9.04□□□□□ -0.96
HIF3A-210ENST00000526506 FAM19A1Q7Z5A9 133 aa9.04□□□□□ -0.96
HIF3A-210ENST00000526506 ATOH7Q8N100 152 aa9.04□□□□□ -0.96
HIF3A-210ENST00000526506 PRR26Q8N8Z3 221 aa9.04□□□□□ -0.96
HIF3A-210ENST00000526506 TIMM17BO60830 172 aa9.03□□□□□ -0.96
HIF3A-210ENST00000526506 TRBV10-2A0A0K0K1G8 114 aa9.02□□□□□ -0.97
HIF3A-210ENST00000526506 PRYO14603 147 aa9.02□□□□□ -0.97
HIF3A-210ENST00000526506 NPC2P61916 151 aa9.02□□□□□ -0.97
HIF3A-210ENST00000526506 ANKRD39Q53RE8 183 aa9.02□□□□□ -0.97
HIF3A-210ENST00000526506 LITAFQ99732 161 aa9.02□□□□□ -0.97
HIF3A-210ENST00000526506 TTTY13Q9BZ97 58 aa9.02□□□□□ -0.97
HIF3A-210ENST00000526506 SPANXB1Q9NS25 103 aaPredicted RBP9.02□□□□□ -0.97
HIF3A-210ENST00000526506 TRBV10-3A0A0K0K1G6 114 aa9.01□□□□□ -0.97
HIF3A-210ENST00000526506 NDUFC2O95298 119 aa9.01□□□□□ -0.97
HIF3A-210ENST00000526506 SOSTDC1Q6X4U4 206 aa9.01□□□□□ -0.97
HIF3A-210ENST00000526506 KCNQ1DNQ9H478 68 aa9.01□□□□□ -0.97
HIF3A-210ENST00000526506 RPL13AP40429 203 aaKnown RBP9□□□□□ -0.97
HIF3A-210ENST00000526506 SNRPEP62304 92 aaKnown RBP9□□□□□ -0.97
HIF3A-210ENST00000526506 S100A12P80511 92 aa9□□□□□ -0.97
HIF3A-210ENST00000526506 EIF4EBP3O60516 100 aaPredicted RBP8.99□□□□□ -0.97
HIF3A-210ENST00000526506 DDTP30046 118 aa8.99□□□□□ -0.97
HIF3A-210ENST00000526506 SCGB1D4Q6XE38 83 aa8.99□□□□□ -0.97
HIF3A-210ENST00000526506 HMCN2Q8NDA2 5059 aa8.98□□□□□ -0.97
HIF3A-210ENST00000526506 LINC00308Q8TCZ7 52 aa8.98□□□□□ -0.97
HIF3A-210ENST00000526506 TNXBP22105 4242 aa8.97□□□□□ -0.97
HIF3A-210ENST00000526506 SPRR1AP35321 89 aa8.97□□□□□ -0.97
HIF3A-210ENST00000526506 S100A7L2Q5SY68 101 aa8.97□□□□□ -0.97
HIF3A-210ENST00000526506 LINC00337Q8N6G1 96 aa8.97□□□□□ -0.97
HIF3A-210ENST00000526506 ETDCA0A1B0GVM5 59 aa8.96□□□□□ -0.98
HIF3A-210ENST00000526506 C5orf52A6NGY3 159 aa8.96□□□□□ -0.98
HIF3A-210ENST00000526506 HIGD2AQ9BW72 106 aa8.96□□□□□ -0.98
HIF3A-210ENST00000526506 SPANXCQ9NY87 97 aa8.96□□□□□ -0.98
HIF3A-210ENST00000526506 KRTAP4-16G5E9R7 235 aaPredicted RBP8.95□□□□□ -0.98
HIF3A-210ENST00000526506 IGLV6-57P01721 117 aa8.95□□□□□ -0.98
HIF3A-210ENST00000526506 CRYGAP11844 174 aa8.95□□□□□ -0.98
HIF3A-210ENST00000526506 PCP2Q8IVA1 136 aa8.95□□□□□ -0.98
HIF3A-210ENST00000526506 HSBP1L1C9JCN9 74 aa8.94□□□□□ -0.98
HIF3A-210ENST00000526506 A0A087X002 238 aa8.93□□□□□ -0.98
HIF3A-210ENST00000526506 FAM229BQ4G0N7 80 aa8.93□□□□□ -0.98
HIF3A-210ENST00000526506 SPANXDQ9BXN6 97 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms