RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 PFN2P35080 140 aa11.13□□□□□ -0.63
TSPAN4-216ENST00000526055 NKAPP1Q8N9T2 125 aa11.13□□□□□ -0.63
TSPAN4-216ENST00000526055 LINC00167Q96N53 147 aa11.13□□□□□ -0.63
TSPAN4-216ENST00000526055 BCE1O60756 84 aa11.12□□□□□ -0.63
TSPAN4-216ENST00000526055 ZNF625Q96I27 306 aaPredicted RBP11.12□□□□□ -0.63
TSPAN4-216ENST00000526055 TMEM223A0PJW6 202 aa11.11□□□□□ -0.63
TSPAN4-216ENST00000526055 KRTAP1-4P0C5Y4 121 aa11.11□□□□□ -0.63
TSPAN4-216ENST00000526055 DPM2O94777 84 aa11.1□□□□□ -0.63
TSPAN4-216ENST00000526055 S100A6P06703 90 aa11.1□□□□□ -0.63
TSPAN4-216ENST00000526055 RPL28P46779 137 aaKnown RBP11.1□□□□□ -0.63
TSPAN4-216ENST00000526055 SND1-IT1Q9HBX3 110 aa11.1□□□□□ -0.63
TSPAN4-216ENST00000526055 SYS1-DBNDD2H3BUS1 97 aa11.09□□□□□ -0.63
TSPAN4-216ENST00000526055 RPL13AP40429 203 aaKnown RBP11.09□□□□□ -0.63
TSPAN4-216ENST00000526055 RPL24P83731 157 aaKnown RBP11.09□□□□□ -0.63
TSPAN4-216ENST00000526055 PRR26Q8N8Z3 221 aa11.09□□□□□ -0.63
TSPAN4-216ENST00000526055 RPL37AP8A6NKH3 93 aa11.08□□□□□ -0.64
TSPAN4-216ENST00000526055 PET117Q6UWS5 81 aa11.08□□□□□ -0.64
TSPAN4-216ENST00000526055 IGKCP01834 107 aa11.07□□□□□ -0.64
TSPAN4-216ENST00000526055 VPREB1P12018 145 aa11.07□□□□□ -0.64
TSPAN4-216ENST00000526055 GAGE10A6NGK3 116 aa11.06□□□□□ -0.64
TSPAN4-216ENST00000526055 S100A2P29034 98 aa11.06□□□□□ -0.64
TSPAN4-216ENST00000526055 HERVK_113P61574 105 aa11.06□□□□□ -0.64
TSPAN4-216ENST00000526055 C3orf79P0CE67 100 aa11.04□□□□□ -0.64
TSPAN4-216ENST00000526055 HERV-K104P63124 156 aa11.04□□□□□ -0.64
TSPAN4-216ENST00000526055 LINC01545Q5VT33 79 aa11.04□□□□□ -0.64
TSPAN4-216ENST00000526055 PMCHL2Q9BQD1 86 aa11.04□□□□□ -0.64
TSPAN4-216ENST00000526055 C20orf202A1L168 122 aa11.03□□□□□ -0.64
TSPAN4-216ENST00000526055 LINC00587B1AMM8 73 aa11.03□□□□□ -0.64
TSPAN4-216ENST00000526055 LINC00158P58513 81 aa11.03□□□□□ -0.64
TSPAN4-216ENST00000526055 KRTDAPP60985 99 aa11.03□□□□□ -0.64
TSPAN4-216ENST00000526055 HIST3H2BBQ8N257 126 aa11.03□□□□□ -0.64
TSPAN4-216ENST00000526055 AKR1D1P51857 326 aa11.02□□□□□ -0.65
TSPAN4-216ENST00000526055 IGKV2-28A0A075B6P5 120 aa11.01□□□□□ -0.65
TSPAN4-216ENST00000526055 IGKV2D-28P01615 120 aa11.01□□□□□ -0.65
TSPAN4-216ENST00000526055 UBE2AP49459 152 aa11.01□□□□□ -0.65
TSPAN4-216ENST00000526055 KRTAP13-1Q8IUC0 172 aa11.01□□□□□ -0.65
TSPAN4-216ENST00000526055 PLEKHB2Q96CS7 222 aa11.01□□□□□ -0.65
TSPAN4-216ENST00000526055 MYMXA0A1B0GTQ4 84 aa10.99□□□□□ -0.65
TSPAN4-216ENST00000526055 LEPROTO15243 131 aa10.99□□□□□ -0.65
TSPAN4-216ENST00000526055 HIST1H2BLQ99880 126 aa10.99□□□□□ -0.65
TSPAN4-216ENST00000526055 NDUFA12Q9UI09 145 aa10.99□□□□□ -0.65
TSPAN4-216ENST00000526055 SNRPEP62304 92 aaKnown RBP10.98□□□□□ -0.65
TSPAN4-216ENST00000526055 MEIG1Q5JSS6 88 aa10.98□□□□□ -0.65
TSPAN4-216ENST00000526055 SMIM13P0DJ93 91 aa10.97□□□□□ -0.65
TSPAN4-216ENST00000526055 Q8NDZ9 215 aa10.97□□□□□ -0.65
TSPAN4-216ENST00000526055 TMEM126AQ9H061 195 aa10.97□□□□□ -0.65
TSPAN4-216ENST00000526055 LRP2P98164 4655 aa10.97□□□□□ -0.65
TSPAN4-216ENST00000526055 J3QQQ9 107 aa10.96□□□□□ -0.65
TSPAN4-216ENST00000526055 M0R378 163 aa10.96□□□□□ -0.65
TSPAN4-216ENST00000526055 NMUP48645 174 aa10.96□□□□□ -0.65
TSPAN4-216ENST00000526055 A0A0U1RRA0 63 aa10.95□□□□□ -0.66
TSPAN4-216ENST00000526055 C5orf52A6NGY3 159 aa10.95□□□□□ -0.66
TSPAN4-216ENST00000526055 E9PLD3 99 aa10.95□□□□□ -0.66
TSPAN4-216ENST00000526055 CRYGAP11844 174 aa10.95□□□□□ -0.66
TSPAN4-216ENST00000526055 LGALS3P17931 250 aaKnown RBP10.95□□□□□ -0.66
TSPAN4-216ENST00000526055 MIR7-3HGQ8N6C7 128 aa10.94□□□□□ -0.66
TSPAN4-216ENST00000526055 TMEM238C9JI98 176 aa10.93□□□□□ -0.66
TSPAN4-216ENST00000526055 FAM19A1Q7Z5A9 133 aa10.93□□□□□ -0.66
TSPAN4-216ENST00000526055 IGKV2D-26A0A0A0MRZ7 120 aa10.92□□□□□ -0.66
TSPAN4-216ENST00000526055 TSPEAR-AS2P59090 65 aa10.92□□□□□ -0.66
TSPAN4-216ENST00000526055 FAM229BQ4G0N7 80 aa10.92□□□□□ -0.66
TSPAN4-216ENST00000526055 BOD1L2Q8IYS8 172 aa10.92□□□□□ -0.66
TSPAN4-216ENST00000526055 A0A087X002 238 aa10.91□□□□□ -0.66
TSPAN4-216ENST00000526055 LOC107984156A0A0G2JMH3 177 aa10.9□□□□□ -0.66
TSPAN4-216ENST00000526055 PRLHP81277 87 aa10.9□□□□□ -0.66
TSPAN4-216ENST00000526055 ARL17AQ8IVW1 177 aa10.9□□□□□ -0.66
TSPAN4-216ENST00000526055 TYMSOSQ8TAI1 123 aa10.9□□□□□ -0.66
TSPAN4-216ENST00000526055 PRYO14603 147 aa10.88□□□□□ -0.67
TSPAN4-216ENST00000526055 KCNQ1DNQ9H478 68 aa10.87□□□□□ -0.67
TSPAN4-216ENST00000526055 SPRR1AP35321 89 aa10.85□□□□□ -0.67
TSPAN4-216ENST00000526055 S100A12P80511 92 aa10.85□□□□□ -0.67
TSPAN4-216ENST00000526055 ATOH7Q8N100 152 aa10.85□□□□□ -0.67
TSPAN4-216ENST00000526055 LINC00337Q8N6G1 96 aa10.85□□□□□ -0.67
TSPAN4-216ENST00000526055 TRBV10-2A0A0K0K1G8 114 aa10.84□□□□□ -0.67
TSPAN4-216ENST00000526055 HSBP1L1C9JCN9 74 aa10.84□□□□□ -0.67
TSPAN4-216ENST00000526055 NCR3O14931 201 aa10.84□□□□□ -0.67
TSPAN4-216ENST00000526055 ANAPC11Q9NYG5 84 aa10.84□□□□□ -0.67
TSPAN4-216ENST00000526055 SCGB1D1O95968 90 aa10.83□□□□□ -0.68
TSPAN4-216ENST00000526055 KRTAP13-2Q52LG2 175 aa10.83□□□□□ -0.68
TSPAN4-216ENST00000526055 MIEN1Q9BRT3 115 aa10.83□□□□□ -0.68
TSPAN4-216ENST00000526055 HIGD2AQ9BW72 106 aa10.83□□□□□ -0.68
TSPAN4-216ENST00000526055 A0A0J9YXY3 114 aa10.82□□□□□ -0.68
TSPAN4-216ENST00000526055 ZNF815PA8K554 130 aa10.82□□□□□ -0.68
TSPAN4-216ENST00000526055 CTAG1AP78358 180 aa10.82□□□□□ -0.68
TSPAN4-216ENST00000526055 TRBV10-3A0A0K0K1G6 114 aa10.81□□□□□ -0.68
TSPAN4-216ENST00000526055 NDUFC2O95298 119 aa10.81□□□□□ -0.68
TSPAN4-216ENST00000526055 ANKRD39Q53RE8 183 aa10.81□□□□□ -0.68
TSPAN4-216ENST00000526055 DAND5Q8N907 189 aa10.81□□□□□ -0.68
TSPAN4-216ENST00000526055 SPANXB1Q9NS25 103 aaPredicted RBP10.81□□□□□ -0.68
TSPAN4-216ENST00000526055 ZNF706Q9Y5V0 76 aaPredicted RBP10.81□□□□□ -0.68
TSPAN4-216ENST00000526055 TMA7Q9Y2S6 64 aaKnown RBP10.8□□□□□ -0.68
TSPAN4-216ENST00000526055 ETDCA0A1B0GVM5 59 aa10.79□□□□□ -0.68
TSPAN4-216ENST00000526055 KRTAP4-16G5E9R7 235 aaPredicted RBP10.79□□□□□ -0.68
TSPAN4-216ENST00000526055 TIMM17BO60830 172 aa10.79□□□□□ -0.68
TSPAN4-216ENST00000526055 RNF213Q63HN8 5207 aa10.79□□□□□ -0.68
TSPAN4-216ENST00000526055 TSPAN13O95857 204 aa10.78□□□□□ -0.68
TSPAN4-216ENST00000526055 PRR4Q16378 134 aa10.78□□□□□ -0.68
TSPAN4-216ENST00000526055 SPRR4Q96PI1 79 aa10.78□□□□□ -0.68
TSPAN4-216ENST00000526055 DDTP30046 118 aa10.77□□□□□ -0.69
TSPAN4-216ENST00000526055 LINC00304Q8N9R0 145 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 558.9 ms