RNA–Protein interactions for RNA: ENST00000525602.1

CLP1-202, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-202ENST00000525602 HIST1H2BMQ99879 126 aa7.76□□□□□ -1.17
CLP1-202ENST00000525602 SND1-IT1Q9HBX3 110 aa7.76□□□□□ -1.17
CLP1-202ENST00000525602 DIRC1Q969H9 104 aa7.75□□□□□ -1.17
CLP1-202ENST00000525602 H0Y9J4 135 aa7.74□□□□□ -1.17
CLP1-202ENST00000525602 NKAPP1Q8N9T2 125 aa7.74□□□□□ -1.17
CLP1-202ENST00000525602 LINC00167Q96N53 147 aa7.74□□□□□ -1.17
CLP1-202ENST00000525602 GAGE10A6NGK3 116 aa7.73□□□□□ -1.17
CLP1-202ENST00000525602 PLNP26678 52 aa7.73□□□□□ -1.17
CLP1-202ENST00000525602 RPL37AP8A6NKH3 93 aa7.72□□□□□ -1.17
CLP1-202ENST00000525602 VPREB1P12018 145 aa7.72□□□□□ -1.17
CLP1-202ENST00000525602 KRTAP10-8P60410 259 aa7.72□□□□□ -1.17
CLP1-202ENST00000525602 PMCHL2Q9BQD1 86 aa7.72□□□□□ -1.17
CLP1-202ENST00000525602 DPM2O94777 84 aa7.71□□□□□ -1.17
CLP1-202ENST00000525602 LINC00158P58513 81 aa7.71□□□□□ -1.17
CLP1-202ENST00000525602 MAP1LC3CQ9BXW4 147 aa7.71□□□□□ -1.17
CLP1-202ENST00000525602 A0A0U1RRA0 63 aa7.71□□□□□ -1.18
CLP1-202ENST00000525602 ZNF861PO60384 105 aa7.71□□□□□ -1.18
CLP1-202ENST00000525602 BCE1O60756 84 aa7.71□□□□□ -1.18
CLP1-202ENST00000525602 IGKCP01834 107 aa7.71□□□□□ -1.18
CLP1-202ENST00000525602 TSPEAR-AS2P59090 65 aa7.71□□□□□ -1.18
CLP1-202ENST00000525602 HERV-K104P63124 156 aa7.71□□□□□ -1.18
CLP1-202ENST00000525602 Q8NDZ9 215 aa7.71□□□□□ -1.18
CLP1-202ENST00000525602 NDUFA12Q9UI09 145 aa7.71□□□□□ -1.18
CLP1-202ENST00000525602 LEPROTO15243 131 aa7.7□□□□□ -1.18
CLP1-202ENST00000525602 SMIM13P0DJ93 91 aa7.7□□□□□ -1.18
CLP1-202ENST00000525602 RPL24P83731 157 aaKnown RBP7.7□□□□□ -1.18
CLP1-202ENST00000525602 MEIG1Q5JSS6 88 aa7.7□□□□□ -1.18
CLP1-202ENST00000525602 IGKV2-28A0A075B6P5 120 aa7.69□□□□□ -1.18
CLP1-202ENST00000525602 MYMXA0A1B0GTQ4 84 aa7.69□□□□□ -1.18
CLP1-202ENST00000525602 IGKV2D-28P01615 120 aa7.69□□□□□ -1.18
CLP1-202ENST00000525602 KRTAP1-4P0C5Y4 121 aa7.69□□□□□ -1.18
CLP1-202ENST00000525602 HERVK_113P61574 105 aa7.69□□□□□ -1.18
CLP1-202ENST00000525602 PLEKHB2Q96CS7 222 aa7.69□□□□□ -1.18
CLP1-202ENST00000525602 IGLV1-50A0A075B6I6 118 aa7.67□□□□□ -1.18
CLP1-202ENST00000525602 SYS1-DBNDD2H3BUS1 97 aa7.67□□□□□ -1.18
CLP1-202ENST00000525602 J3QQQ9 107 aa7.67□□□□□ -1.18
CLP1-202ENST00000525602 RPL28P46779 137 aaKnown RBP7.67□□□□□ -1.18
CLP1-202ENST00000525602 MIR7-3HGQ8N6C7 128 aa7.67□□□□□ -1.18
CLP1-202ENST00000525602 LINC00587B1AMM8 73 aa7.66□□□□□ -1.18
CLP1-202ENST00000525602 ATP6V1G1O75348 118 aa7.66□□□□□ -1.18
CLP1-202ENST00000525602 COA6Q5JTJ3 125 aaKnown RBP7.66□□□□□ -1.18
CLP1-202ENST00000525602 PRR26Q8N8Z3 221 aa7.66□□□□□ -1.18
CLP1-202ENST00000525602 LGALS3P17931 250 aaKnown RBP7.65□□□□□ -1.18
CLP1-202ENST00000525602 NMUP48645 174 aa7.65□□□□□ -1.18
CLP1-202ENST00000525602 KRTAP13-1Q8IUC0 172 aa7.65□□□□□ -1.18
CLP1-202ENST00000525602 TMEM238C9JI98 176 aa7.64□□□□□ -1.19
CLP1-202ENST00000525602 UBE2AP49459 152 aa7.64□□□□□ -1.19
CLP1-202ENST00000525602 LINC01545Q5VT33 79 aa7.64□□□□□ -1.19
CLP1-202ENST00000525602 BOD1L2Q8IYS8 172 aa7.64□□□□□ -1.19
CLP1-202ENST00000525602 TMEM126AQ9H061 195 aa7.64□□□□□ -1.19
CLP1-202ENST00000525602 E9PLD3 99 aa7.63□□□□□ -1.19
CLP1-202ENST00000525602 PET117Q6UWS5 81 aa7.63□□□□□ -1.19
CLP1-202ENST00000525602 M0R378 163 aa7.62□□□□□ -1.19
CLP1-202ENST00000525602 LCE2AQ5TA79 106 aaPredicted RBP7.62□□□□□ -1.19
CLP1-202ENST00000525602 DAND5Q8N907 189 aa7.62□□□□□ -1.19
CLP1-202ENST00000525602 NCR3O14931 201 aa7.61□□□□□ -1.19
CLP1-202ENST00000525602 C3orf79P0CE67 100 aa7.61□□□□□ -1.19
CLP1-202ENST00000525602 S100A1P23297 94 aa7.61□□□□□ -1.19
CLP1-202ENST00000525602 PRLHP81277 87 aa7.61□□□□□ -1.19
CLP1-202ENST00000525602 MUC2Q02817 5179 aa7.61□□□□□ -1.19
CLP1-202ENST00000525602 FAM19A1Q7Z5A9 133 aa7.6□□□□□ -1.19
CLP1-202ENST00000525602 IGKV2D-26A0A0A0MRZ7 120 aa7.59□□□□□ -1.19
CLP1-202ENST00000525602 LOC107984156A0A0G2JMH3 177 aa7.59□□□□□ -1.19
CLP1-202ENST00000525602 RPL13AP40429 203 aaKnown RBP7.59□□□□□ -1.19
CLP1-202ENST00000525602 KRTDAPP60985 99 aa7.59□□□□□ -1.19
CLP1-202ENST00000525602 ARL17AQ8IVW1 177 aa7.59□□□□□ -1.19
CLP1-202ENST00000525602 A0A0J9YXY3 114 aa7.59□□□□□ -1.2
CLP1-202ENST00000525602 PRYO14603 147 aa7.58□□□□□ -1.2
CLP1-202ENST00000525602 A0A087X002 238 aa7.57□□□□□ -1.2
CLP1-202ENST00000525602 MIEN1Q9BRT3 115 aa7.57□□□□□ -1.2
CLP1-202ENST00000525602 TRBV10-3A0A0K0K1G6 114 aa7.56□□□□□ -1.2
CLP1-202ENST00000525602 LCE2CQ5TA81 110 aa7.56□□□□□ -1.2
CLP1-202ENST00000525602 KCNQ1DNQ9H478 68 aa7.56□□□□□ -1.2
CLP1-202ENST00000525602 TRBV10-2A0A0K0K1G8 114 aa7.55□□□□□ -1.2
CLP1-202ENST00000525602 C20orf202A1L168 122 aa7.55□□□□□ -1.2
CLP1-202ENST00000525602 SPRR1AP35321 89 aa7.55□□□□□ -1.2
CLP1-202ENST00000525602 NPC2P61916 151 aa7.55□□□□□ -1.2
CLP1-202ENST00000525602 ADAMTSL4-AS1Q5T5F5 129 aa7.55□□□□□ -1.2
CLP1-202ENST00000525602 SOSTDC1Q6X4U4 206 aa7.55□□□□□ -1.2
CLP1-202ENST00000525602 SPANXB1Q9NS25 103 aaPredicted RBP7.55□□□□□ -1.2
CLP1-202ENST00000525602 ANAPC11Q9NYG5 84 aa7.55□□□□□ -1.2
CLP1-202ENST00000525602 ZNF815PA8K554 130 aa7.54□□□□□ -1.2
CLP1-202ENST00000525602 EIF4EBP3O60516 100 aaPredicted RBP7.54□□□□□ -1.2
CLP1-202ENST00000525602 NDUFC2O95298 119 aa7.54□□□□□ -1.2
CLP1-202ENST00000525602 CRYGAP11844 174 aa7.54□□□□□ -1.2
CLP1-202ENST00000525602 LINC00337Q8N6G1 96 aa7.54□□□□□ -1.2
CLP1-202ENST00000525602 LITAFQ99732 161 aa7.54□□□□□ -1.2
CLP1-202ENST00000525602 TIMM17BO60830 172 aa7.53□□□□□ -1.2
CLP1-202ENST00000525602 DDTP30046 118 aa7.53□□□□□ -1.2
CLP1-202ENST00000525602 HIGD2AQ9BW72 106 aa7.53□□□□□ -1.2
CLP1-202ENST00000525602 TTTY13Q9BZ97 58 aa7.53□□□□□ -1.2
CLP1-202ENST00000525602 KRTAP4-16G5E9R7 235 aaPredicted RBP7.52□□□□□ -1.21
CLP1-202ENST00000525602 FAM229BQ4G0N7 80 aa7.52□□□□□ -1.21
CLP1-202ENST00000525602 ATOH7Q8N100 152 aa7.52□□□□□ -1.21
CLP1-202ENST00000525602 HIST3H2BBQ8N257 126 aa7.52□□□□□ -1.21
CLP1-202ENST00000525602 ETDCA0A1B0GVM5 59 aa7.51□□□□□ -1.21
CLP1-202ENST00000525602 S100A12P80511 92 aa7.51□□□□□ -1.21
CLP1-202ENST00000525602 KRTAP13-2Q52LG2 175 aa7.51□□□□□ -1.21
CLP1-202ENST00000525602 ANKRD39Q53RE8 183 aa7.51□□□□□ -1.21
CLP1-202ENST00000525602 TYMSOSQ8TAI1 123 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms