RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 E9PLD3 99 aa3.35□□□□□ -1.87
HMGB1P40-201ENST00000525121 OXTP01178 125 aa3.35□□□□□ -1.87
HMGB1P40-201ENST00000525121 SMIM13P0DJ93 91 aa3.35□□□□□ -1.87
HMGB1P40-201ENST00000525121 KRTAP10-4P60372 401 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P40-201ENST00000525121 S100A12P80511 92 aa3.35□□□□□ -1.87
HMGB1P40-201ENST00000525121 SPINK6Q6UWN8 80 aa3.35□□□□□ -1.87
HMGB1P40-201ENST00000525121 DIRC1Q969H9 104 aa3.35□□□□□ -1.87
HMGB1P40-201ENST00000525121 DNAH5Q8TE73 4624 aa3.35□□□□□ -1.87
HMGB1P40-201ENST00000525121 APOBP04114 4563 aaKnown RBP3.34□□□□□ -1.87
HMGB1P40-201ENST00000525121 TMEM238LA0A1B0GVL6 79 aa3.34□□□□□ -1.87
HMGB1P40-201ENST00000525121 KRTAP29-1A8MX34 341 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P40-201ENST00000525121 HSBP1L1C9JCN9 74 aa3.34□□□□□ -1.87
HMGB1P40-201ENST00000525121 IGLV7-43P04211 117 aa3.34□□□□□ -1.87
HMGB1P40-201ENST00000525121 TSPEAR-AS2P59090 65 aa3.34□□□□□ -1.87
HMGB1P40-201ENST00000525121 CTAG1AP78358 180 aa3.34□□□□□ -1.87
HMGB1P40-201ENST00000525121 BOD1L2Q8IYS8 172 aa3.34□□□□□ -1.87
HMGB1P40-201ENST00000525121 HIST3H2BBQ8N257 126 aa3.34□□□□□ -1.87
HMGB1P40-201ENST00000525121 MIR7-3HGQ8N6C7 128 aa3.34□□□□□ -1.87
HMGB1P40-201ENST00000525121 IGKV2-28A0A075B6P5 120 aa3.33□□□□□ -1.88
HMGB1P40-201ENST00000525121 RPL37AP8A6NKH3 93 aa3.33□□□□□ -1.88
HMGB1P40-201ENST00000525121 ZNF815PA8K554 130 aa3.33□□□□□ -1.88
HMGB1P40-201ENST00000525121 BCE1O60756 84 aa3.33□□□□□ -1.88
HMGB1P40-201ENST00000525121 IGKV2D-28P01615 120 aa3.33□□□□□ -1.88
HMGB1P40-201ENST00000525121 VPREB1P12018 145 aa3.33□□□□□ -1.88
HMGB1P40-201ENST00000525121 RPL28P46779 137 aaKnown RBP3.33□□□□□ -1.88
HMGB1P40-201ENST00000525121 UBE2AP49459 152 aa3.33□□□□□ -1.88
HMGB1P40-201ENST00000525121 HNRNPA3P51991 378 aaKnown RBP3.33□□□□□ -1.88
HMGB1P40-201ENST00000525121 SNRPEP62304 92 aaKnown RBP3.33□□□□□ -1.88
HMGB1P40-201ENST00000525121 SCGB1D4Q6XE38 83 aa3.33□□□□□ -1.88
HMGB1P40-201ENST00000525121 KRTAP7-1Q8IUC3 87 aa3.33□□□□□ -1.88
HMGB1P40-201ENST00000525121 COPS9Q8WXC6 57 aa3.33□□□□□ -1.88
HMGB1P40-201ENST00000525121 LINC00167Q96N53 147 aa3.33□□□□□ -1.88
HMGB1P40-201ENST00000525121 HIST1H2BLQ99880 126 aa3.33□□□□□ -1.88
HMGB1P40-201ENST00000525121 RYR1P21817 5038 aa3.33□□□□□ -1.88
HMGB1P40-201ENST00000525121 IGKV2D-26A0A0A0MRZ7 120 aa3.32□□□□□ -1.88
HMGB1P40-201ENST00000525121 A0A0J9YXY3 114 aa3.32□□□□□ -1.88
HMGB1P40-201ENST00000525121 M0R378 163 aa3.32□□□□□ -1.88
HMGB1P40-201ENST00000525121 ATOH7Q8N100 152 aa3.32□□□□□ -1.88
HMGB1P40-201ENST00000525121 IGLV1-50A0A075B6I6 118 aa3.31□□□□□ -1.88
HMGB1P40-201ENST00000525121 TMEM238C9JI98 176 aa3.31□□□□□ -1.88
HMGB1P40-201ENST00000525121 H0Y9J4 135 aa3.31□□□□□ -1.88
HMGB1P40-201ENST00000525121 NCR3O14931 201 aa3.31□□□□□ -1.88
HMGB1P40-201ENST00000525121 ZNF861PO60384 105 aa3.31□□□□□ -1.88
HMGB1P40-201ENST00000525121 TIMM17BO60830 172 aa3.31□□□□□ -1.88
HMGB1P40-201ENST00000525121 SCGB1D1O95968 90 aa3.31□□□□□ -1.88
HMGB1P40-201ENST00000525121 SRSF9Q13242 221 aaKnown RBP eCLIP3.31□□□□□ -1.88
HMGB1P40-201ENST00000525121 KRTAP11-1Q8IUC1 163 aa3.31□□□□□ -1.88
HMGB1P40-201ENST00000525121 DAND5Q8N907 189 aa3.31□□□□□ -1.88
HMGB1P40-201ENST00000525121 SPANXB1Q9NS25 103 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P40-201ENST00000525121 CBY1Q9Y3M2 126 aa3.31□□□□□ -1.88
HMGB1P40-201ENST00000525121 TRBV10-2A0A0K0K1G8 114 aa3.3□□□□□ -1.88
HMGB1P40-201ENST00000525121 PRYO14603 147 aa3.3□□□□□ -1.88
HMGB1P40-201ENST00000525121 NDUFC2O95298 119 aa3.3□□□□□ -1.88
HMGB1P40-201ENST00000525121 NPC2P61916 151 aa3.3□□□□□ -1.88
HMGB1P40-201ENST00000525121 S100A7L2Q5SY68 101 aa3.3□□□□□ -1.88
HMGB1P40-201ENST00000525121 FAM19A1Q7Z5A9 133 aa3.3□□□□□ -1.88
HMGB1P40-201ENST00000525121 TMEM126AQ9H061 195 aa3.3□□□□□ -1.88
HMGB1P40-201ENST00000525121 LOC107984156A0A0G2JMH3 177 aa3.29□□□□□ -1.88
HMGB1P40-201ENST00000525121 ETDCA0A1B0GVM5 59 aa3.29□□□□□ -1.88
HMGB1P40-201ENST00000525121 C5orf52A6NGY3 159 aa3.29□□□□□ -1.88
HMGB1P40-201ENST00000525121 A6NJY4 79 aa3.29□□□□□ -1.88
HMGB1P40-201ENST00000525121 DDTP30046 118 aa3.29□□□□□ -1.88
HMGB1P40-201ENST00000525121 ANKRD39Q53RE8 183 aa3.29□□□□□ -1.88
HMGB1P40-201ENST00000525121 ARL17AQ8IVW1 177 aa3.29□□□□□ -1.88
HMGB1P40-201ENST00000525121 LINC01600Q96MT4 127 aa3.29□□□□□ -1.88
HMGB1P40-201ENST00000525121 SPANXCQ9NY87 97 aa3.29□□□□□ -1.88
HMGB1P40-201ENST00000525121 SRRM2Q9UQ35 2752 aaKnown RBP3.29□□□□□ -1.88
HMGB1P40-201ENST00000525121 TRBV10-3A0A0K0K1G6 114 aa3.28□□□□□ -1.88
HMGB1P40-201ENST00000525121 IFITM1P13164 125 aa3.28□□□□□ -1.88
HMGB1P40-201ENST00000525121 RPL13AP40429 203 aaKnown RBP3.28□□□□□ -1.88
HMGB1P40-201ENST00000525121 HINT1P49773 126 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P40-201ENST00000525121 PRLHP81277 87 aa3.28□□□□□ -1.88
HMGB1P40-201ENST00000525121 Q6ZVH6 145 aa3.28□□□□□ -1.88
HMGB1P40-201ENST00000525121 Q8NDZ9 215 aa3.28□□□□□ -1.88
HMGB1P40-201ENST00000525121 OR13C6PQ8NH95 151 aa3.28□□□□□ -1.88
HMGB1P40-201ENST00000525121 LINC00308Q8TCZ7 52 aa3.28□□□□□ -1.88
HMGB1P40-201ENST00000525121 SPANXDQ9BXN6 97 aa3.28□□□□□ -1.88
HMGB1P40-201ENST00000525121 TTTY13Q9BZ97 58 aa3.28□□□□□ -1.88
HMGB1P40-201ENST00000525121 FLG2Q5D862 2391 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P40-201ENST00000525121 DNAH8Q96JB1 4490 aa3.27□□□□□ -1.89
HMGB1P40-201ENST00000525121 TRAV23DV6A0A075B6W5 121 aa3.27□□□□□ -1.89
HMGB1P40-201ENST00000525121 ADAMTSL4-AS1Q5T5F5 129 aa3.27□□□□□ -1.89
HMGB1P40-201ENST00000525121 PCP2Q8IVA1 136 aa3.27□□□□□ -1.89
HMGB1P40-201ENST00000525121 LINC00518Q8N0U6 118 aa3.27□□□□□ -1.89
HMGB1P40-201ENST00000525121 LINC00337Q8N6G1 96 aa3.27□□□□□ -1.89
HMGB1P40-201ENST00000525121 LITAFQ99732 161 aa3.27□□□□□ -1.89
HMGB1P40-201ENST00000525121 HIGD2AQ9BW72 106 aa3.27□□□□□ -1.89
HMGB1P40-201ENST00000525121 KCNQ1DNQ9H478 68 aa3.27□□□□□ -1.89
HMGB1P40-201ENST00000525121 ZNF706Q9Y5V0 76 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P40-201ENST00000525121 IGLV6-57P01721 117 aa3.26□□□□□ -1.89
HMGB1P40-201ENST00000525121 JOSD1Q15040 202 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P40-201ENST00000525121 LCE2DQ5TA82 110 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P40-201ENST00000525121 SOSTDC1Q6X4U4 206 aa3.26□□□□□ -1.89
HMGB1P40-201ENST00000525121 VAMP8Q9BV40 100 aa3.26□□□□□ -1.89
HMGB1P40-201ENST00000525121 DMBT1Q9UGM3 2413 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P40-201ENST00000525121 FAT1Q14517 4588 aa3.26□□□□□ -1.89
HMGB1P40-201ENST00000525121 A6NDN8 102 aa3.25□□□□□ -1.89
HMGB1P40-201ENST00000525121 ZNF73O43830 326 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P40-201ENST00000525121 MT1HL1P0DM35 61 aa3.25□□□□□ -1.89
HMGB1P40-201ENST00000525121 CRYGAP11844 174 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms