RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 HMCN2Q8NDA2 5059 aa12.66□□□□□ -0.38
TRAPPC9-215ENST00000524162 DPM2O94777 84 aa12.66□□□□□ -0.38
TRAPPC9-215ENST00000524162 FABP4P15090 132 aa12.66□□□□□ -0.38
TRAPPC9-215ENST00000524162 MAP1LC3CQ9BXW4 147 aa12.66□□□□□ -0.38
TRAPPC9-215ENST00000524162 VPREB1P12018 145 aa12.65□□□□□ -0.38
TRAPPC9-215ENST00000524162 H0Y8G0 127 aa12.64□□□□□ -0.39
TRAPPC9-215ENST00000524162 BCE1O60756 84 aa12.64□□□□□ -0.39
TRAPPC9-215ENST00000524162 PLEKHB2Q96CS7 222 aa12.64□□□□□ -0.39
TRAPPC9-215ENST00000524162 MYMXA0A1B0GTQ4 84 aa12.63□□□□□ -0.39
TRAPPC9-215ENST00000524162 LEPROTO15243 131 aa12.63□□□□□ -0.39
TRAPPC9-215ENST00000524162 LINC00158P58513 81 aa12.63□□□□□ -0.39
TRAPPC9-215ENST00000524162 COA6Q5JTJ3 125 aaKnown RBP12.63□□□□□ -0.39
TRAPPC9-215ENST00000524162 NDUFA12Q9UI09 145 aa12.63□□□□□ -0.39
TRAPPC9-215ENST00000524162 IGKCP01834 107 aa12.62□□□□□ -0.39
TRAPPC9-215ENST00000524162 HERVK_113P61574 105 aa12.62□□□□□ -0.39
TRAPPC9-215ENST00000524162 RPL28P46779 137 aaKnown RBP12.61□□□□□ -0.39
TRAPPC9-215ENST00000524162 IGLV1-50A0A075B6I6 118 aa12.6□□□□□ -0.39
TRAPPC9-215ENST00000524162 NMUP48645 174 aa12.6□□□□□ -0.39
TRAPPC9-215ENST00000524162 RPL37AP8A6NKH3 93 aa12.59□□□□□ -0.39
TRAPPC9-215ENST00000524162 KRTAP1-4P0C5Y4 121 aa12.59□□□□□ -0.39
TRAPPC9-215ENST00000524162 SYS1-DBNDD2H3BUS1 97 aa12.58□□□□□ -0.4
TRAPPC9-215ENST00000524162 GAGE10A6NGK3 116 aa12.57□□□□□ -0.4
TRAPPC9-215ENST00000524162 J3QQQ9 107 aa12.57□□□□□ -0.4
TRAPPC9-215ENST00000524162 ATP6V1G1O75348 118 aa12.57□□□□□ -0.4
TRAPPC9-215ENST00000524162 SMIM13P0DJ93 91 aa12.57□□□□□ -0.4
TRAPPC9-215ENST00000524162 MEIG1Q5JSS6 88 aa12.57□□□□□ -0.4
TRAPPC9-215ENST00000524162 LOC107984156A0A0G2JMH3 177 aa12.56□□□□□ -0.4
TRAPPC9-215ENST00000524162 TSPEAR-AS2P59090 65 aa12.56□□□□□ -0.4
TRAPPC9-215ENST00000524162 KRTAP13-1Q8IUC0 172 aa12.56□□□□□ -0.4
TRAPPC9-215ENST00000524162 ARL17AQ8IVW1 177 aa12.56□□□□□ -0.4
TRAPPC9-215ENST00000524162 PET117Q6UWS5 81 aa12.55□□□□□ -0.4
TRAPPC9-215ENST00000524162 IGKV2D-26A0A0A0MRZ7 120 aa12.54□□□□□ -0.4
TRAPPC9-215ENST00000524162 LINC01545Q5VT33 79 aa12.54□□□□□ -0.4
TRAPPC9-215ENST00000524162 MIR7-3HGQ8N6C7 128 aa12.54□□□□□ -0.4
TRAPPC9-215ENST00000524162 Q8NDZ9 215 aa12.54□□□□□ -0.4
TRAPPC9-215ENST00000524162 PMCHL2Q9BQD1 86 aa12.54□□□□□ -0.4
TRAPPC9-215ENST00000524162 IGKV2-28A0A075B6P5 120 aa12.53□□□□□ -0.4
TRAPPC9-215ENST00000524162 E9PLD3 99 aa12.53□□□□□ -0.4
TRAPPC9-215ENST00000524162 M0R378 163 aa12.53□□□□□ -0.4
TRAPPC9-215ENST00000524162 IGKV2D-28P01615 120 aa12.53□□□□□ -0.4
TRAPPC9-215ENST00000524162 S100A1P23297 94 aa12.53□□□□□ -0.4
TRAPPC9-215ENST00000524162 RPL13AP40429 203 aaKnown RBP12.53□□□□□ -0.4
TRAPPC9-215ENST00000524162 A0A0U1RRA0 63 aa12.52□□□□□ -0.41
TRAPPC9-215ENST00000524162 LGALS3P17931 250 aaKnown RBP12.52□□□□□ -0.41
TRAPPC9-215ENST00000524162 PRR26Q8N8Z3 221 aa12.51□□□□□ -0.41
TRAPPC9-215ENST00000524162 TMEM126AQ9H061 195 aa12.51□□□□□ -0.41
TRAPPC9-215ENST00000524162 BOD1L2Q8IYS8 172 aa12.5□□□□□ -0.41
TRAPPC9-215ENST00000524162 UBE2AP49459 152 aa12.49□□□□□ -0.41
TRAPPC9-215ENST00000524162 C3orf79P0CE67 100 aa12.46□□□□□ -0.41
TRAPPC9-215ENST00000524162 TRBV10-2A0A0K0K1G8 114 aa12.45□□□□□ -0.42
TRAPPC9-215ENST00000524162 TMEM238C9JI98 176 aa12.45□□□□□ -0.42
TRAPPC9-215ENST00000524162 PRYO14603 147 aa12.44□□□□□ -0.42
TRAPPC9-215ENST00000524162 NDUFC2O95298 119 aa12.44□□□□□ -0.42
TRAPPC9-215ENST00000524162 AKR1D1P51857 326 aa12.44□□□□□ -0.42
TRAPPC9-215ENST00000524162 KCNQ1DNQ9H478 68 aa12.44□□□□□ -0.42
TRAPPC9-215ENST00000524162 FAM19A1Q7Z5A9 133 aa12.43□□□□□ -0.42
TRAPPC9-215ENST00000524162 A0A0J9YXY3 114 aa12.42□□□□□ -0.42
TRAPPC9-215ENST00000524162 SPRR1AP35321 89 aa12.42□□□□□ -0.42
TRAPPC9-215ENST00000524162 FAM229BQ4G0N7 80 aa12.42□□□□□ -0.42
TRAPPC9-215ENST00000524162 MIEN1Q9BRT3 115 aa12.42□□□□□ -0.42
TRAPPC9-215ENST00000524162 LINC00337Q8N6G1 96 aa12.41□□□□□ -0.42
TRAPPC9-215ENST00000524162 C20orf202A1L168 122 aa12.4□□□□□ -0.42
TRAPPC9-215ENST00000524162 TIMM17BO60830 172 aa12.4□□□□□ -0.42
TRAPPC9-215ENST00000524162 CRYGAP11844 174 aa12.4□□□□□ -0.42
TRAPPC9-215ENST00000524162 PRLHP81277 87 aa12.4□□□□□ -0.42
TRAPPC9-215ENST00000524162 DAND5Q8N907 189 aa12.4□□□□□ -0.42
TRAPPC9-215ENST00000524162 KRTDAPP60985 99 aa12.39□□□□□ -0.43
TRAPPC9-215ENST00000524162 S100A12P80511 92 aa12.39□□□□□ -0.43
TRAPPC9-215ENST00000524162 SPANXB1Q9NS25 103 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC9-215ENST00000524162 KRTAP4-16G5E9R7 235 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC9-215ENST00000524162 NCR3O14931 201 aa12.37□□□□□ -0.43
TRAPPC9-215ENST00000524162 A0A087X002 238 aa12.36□□□□□ -0.43
TRAPPC9-215ENST00000524162 TRBV10-3A0A0K0K1G6 114 aa12.36□□□□□ -0.43
TRAPPC9-215ENST00000524162 ADAMTSL4-AS1Q5T5F5 129 aa12.36□□□□□ -0.43
TRAPPC9-215ENST00000524162 LITAFQ99732 161 aa12.35□□□□□ -0.43
TRAPPC9-215ENST00000524162 IGLV6-57P01721 117 aa12.33□□□□□ -0.44
TRAPPC9-215ENST00000524162 DDTP30046 118 aa12.33□□□□□ -0.44
TRAPPC9-215ENST00000524162 LRP2P98164 4655 aa12.33□□□□□ -0.44
TRAPPC9-215ENST00000524162 ZNF815PA8K554 130 aa12.32□□□□□ -0.44
TRAPPC9-215ENST00000524162 SNRPEP62304 92 aaKnown RBP12.32□□□□□ -0.44
TRAPPC9-215ENST00000524162 SOSTDC1Q6X4U4 206 aa12.32□□□□□ -0.44
TRAPPC9-215ENST00000524162 CTAG1AP78358 180 aa12.31□□□□□ -0.44
TRAPPC9-215ENST00000524162 TYMSOSQ8TAI1 123 aa12.31□□□□□ -0.44
TRAPPC9-215ENST00000524162 HIGD2AQ9BW72 106 aa12.31□□□□□ -0.44
TRAPPC9-215ENST00000524162 CBY1Q9Y3M2 126 aa12.31□□□□□ -0.44
TRAPPC9-215ENST00000524162 UBR4Q5T4S7 5183 aa12.31□□□□□ -0.44
TRAPPC9-215ENST00000524162 ETDCA0A1B0GVM5 59 aa12.3□□□□□ -0.44
TRAPPC9-215ENST00000524162 HIST3H2BBQ8N257 126 aa12.3□□□□□ -0.44
TRAPPC9-215ENST00000524162 PPDPFQ9H3Y8 114 aa12.3□□□□□ -0.44
TRAPPC9-215ENST00000524162 SPANXCQ9NY87 97 aa12.3□□□□□ -0.44
TRAPPC9-215ENST00000524162 ZNF706Q9Y5V0 76 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC9-215ENST00000524162 LINC00308Q8TCZ7 52 aa12.29□□□□□ -0.44
TRAPPC9-215ENST00000524162 EIF4EBP3O60516 100 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC9-215ENST00000524162 KRTAP13-2Q52LG2 175 aa12.28□□□□□ -0.44
TRAPPC9-215ENST00000524162 S100A7L2Q5SY68 101 aa12.28□□□□□ -0.44
TRAPPC9-215ENST00000524162 HIST1H2BLQ99880 126 aa12.28□□□□□ -0.44
TRAPPC9-215ENST00000524162 S100A2P29034 98 aa12.27□□□□□ -0.45
TRAPPC9-215ENST00000524162 SPRR4Q96PI1 79 aa12.27□□□□□ -0.45
TRAPPC9-215ENST00000524162 B5MCH6 92 aa12.26□□□□□ -0.45
TRAPPC9-215ENST00000524162 ANAPC11Q9NYG5 84 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms