RNA–Protein interactions for RNA: ENST00000524047.5

LINCR-0001-203, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-203ENST00000524047 DEFB131AP59861 70 aa2.28□□□□□ -2.04
LINCR-0001-203ENST00000524047 DAD1P61803 113 aa2.28□□□□□ -2.04
LINCR-0001-203ENST00000524047 RBM3P98179 157 aaKnown RBP2.28□□□□□ -2.04
LINCR-0001-203ENST00000524047 DEFB136Q30KP8 78 aa2.28□□□□□ -2.04
LINCR-0001-203ENST00000524047 DEFB114Q30KQ6 69 aa2.28□□□□□ -2.04
LINCR-0001-203ENST00000524047 S100A7L2Q5SY68 101 aa2.28□□□□□ -2.04
LINCR-0001-203ENST00000524047 C2orf66Q6UXQ4 117 aa2.28□□□□□ -2.04
LINCR-0001-203ENST00000524047 KTN1-AS1Q86SY8 53 aa2.28□□□□□ -2.04
LINCR-0001-203ENST00000524047 TMEM61Q8N0U2 210 aa2.28□□□□□ -2.04
LINCR-0001-203ENST00000524047 RPL39LQ96EH5 51 aaKnown RBP2.28□□□□□ -2.04
LINCR-0001-203ENST00000524047 TMEM141Q96I45 108 aa2.28□□□□□ -2.04
LINCR-0001-203ENST00000524047 SCGB3A1Q96QR1 104 aa2.28□□□□□ -2.04
LINCR-0001-203ENST00000524047 TIMM17AQ99595 171 aa2.28□□□□□ -2.04
LINCR-0001-203ENST00000524047 UBE2D4Q9Y2X8 147 aa2.28□□□□□ -2.04
LINCR-0001-203ENST00000524047 ICOSQ9Y6W8 199 aa2.28□□□□□ -2.04
LINCR-0001-203ENST00000524047 SPG11Q96JI7 2443 aa2.28□□□□□ -2.04
LINCR-0001-203ENST00000524047 DOPEY2Q9Y3R5 2298 aa2.28□□□□□ -2.05
LINCR-0001-203ENST00000524047 FAM168BA1KXE4 195 aa2.27□□□□□ -2.05
LINCR-0001-203ENST00000524047 SDHAF1A6NFY7 115 aa2.27□□□□□ -2.05
LINCR-0001-203ENST00000524047 I3L3M4 83 aa2.27□□□□□ -2.05
LINCR-0001-203ENST00000524047 M0QY20 66 aa2.27□□□□□ -2.05
LINCR-0001-203ENST00000524047 M0R378 163 aa2.27□□□□□ -2.05
LINCR-0001-203ENST00000524047 INSP01308 110 aa2.27□□□□□ -2.05
LINCR-0001-203ENST00000524047 SS18Q15532 418 aa2.27□□□□□ -2.05
LINCR-0001-203ENST00000524047 FAM74A4Q5TZK3 123 aa2.27□□□□□ -2.05
LINCR-0001-203ENST00000524047 PHF5AQ7RTV0 110 aaKnown RBP2.27□□□□□ -2.05
LINCR-0001-203ENST00000524047 C20orf197Q8N268 126 aa2.27□□□□□ -2.05
LINCR-0001-203ENST00000524047 C6orf223Q8N319 242 aa2.27□□□□□ -2.05
LINCR-0001-203ENST00000524047 ESM1Q9NQ30 184 aa2.27□□□□□ -2.05
LINCR-0001-203ENST00000524047 DHRS4-AS1Q9P1J3 65 aa2.27□□□□□ -2.05
LINCR-0001-203ENST00000524047 LINC00474Q9P2X8 69 aa2.27□□□□□ -2.05
LINCR-0001-203ENST00000524047 CUBNO60494 3623 aa2.27□□□□□ -2.05
LINCR-0001-203ENST00000524047 MYO18BQ8IUG5 2567 aa2.27□□□□□ -2.05
LINCR-0001-203ENST00000524047 ZNF462Q96JM2 2506 aa2.27□□□□□ -2.05
LINCR-0001-203ENST00000524047 FAM208BQ5VWN6 2430 aa2.26□□□□□ -2.05
LINCR-0001-203ENST00000524047 IGIPA6NJ69 53 aa2.26□□□□□ -2.05
LINCR-0001-203ENST00000524047 C11orf86A6NJI1 115 aa2.26□□□□□ -2.05
LINCR-0001-203ENST00000524047 C8orf87E5RJ46 101 aa2.26□□□□□ -2.05
LINCR-0001-203ENST00000524047 UBE2L6O14933 153 aa2.26□□□□□ -2.05
LINCR-0001-203ENST00000524047 LEPROTO15243 131 aa2.26□□□□□ -2.05
LINCR-0001-203ENST00000524047 CD28P10747 220 aa2.26□□□□□ -2.05
LINCR-0001-203ENST00000524047 Q1T7F1 81 aa2.26□□□□□ -2.05
LINCR-0001-203ENST00000524047 MUSTN1Q8IVN3 82 aa2.26□□□□□ -2.05
LINCR-0001-203ENST00000524047 LINC01006Q8NI28 216 aa2.26□□□□□ -2.05
LINCR-0001-203ENST00000524047 C11orf68Q9H3H3 251 aaKnown RBP2.26□□□□□ -2.05
LINCR-0001-203ENST00000524047 LINC00588Q9Y4M8 146 aa2.26□□□□□ -2.05
LINCR-0001-203ENST00000524047 TEX15Q9BXT5 2789 aa2.26□□□□□ -2.05
LINCR-0001-203ENST00000524047 APCP25054 2843 aa2.25□□□□□ -2.05
LINCR-0001-203ENST00000524047 SORL1Q92673 2214 aa2.25□□□□□ -2.05
LINCR-0001-203ENST00000524047 KMT2BQ9UMN6 2715 aaPredicted RBP2.25□□□□□ -2.05
LINCR-0001-203ENST00000524047 IGLV4-69A0A075B6H9 119 aa2.25□□□□□ -2.05
LINCR-0001-203ENST00000524047 TRAV8-3A0A0A6YYJ7 113 aa2.25□□□□□ -2.05
LINCR-0001-203ENST00000524047 COX7A2LO14548 114 aa2.25□□□□□ -2.05
LINCR-0001-203ENST00000524047 ERC2-IT1O76042 136 aa2.25□□□□□ -2.05
LINCR-0001-203ENST00000524047 IGLV1-51P01701 117 aa2.25□□□□□ -2.05
LINCR-0001-203ENST00000524047 IGHV3-53P01767 116 aa2.25□□□□□ -2.05
LINCR-0001-203ENST00000524047 BAALC-AS2P0C853 105 aa2.25□□□□□ -2.05
LINCR-0001-203ENST00000524047 UBE2BP63146 152 aa2.25□□□□□ -2.05
LINCR-0001-203ENST00000524047 CIRBPQ14011 172 aaKnown RBP2.25□□□□□ -2.05
LINCR-0001-203ENST00000524047 ESRGQ1W209 222 aa2.25□□□□□ -2.05
LINCR-0001-203ENST00000524047 LINC00242Q5T6M2 205 aa2.25□□□□□ -2.05
LINCR-0001-203ENST00000524047 LCE1CQ5T751 118 aa2.25□□□□□ -2.05
LINCR-0001-203ENST00000524047 LCE1BQ5T7P3 118 aa2.25□□□□□ -2.05
LINCR-0001-203ENST00000524047 C20orf203Q8NBC4 194 aa2.25□□□□□ -2.05
LINCR-0001-203ENST00000524047 C11orf72Q8NBR9 251 aa2.25□□□□□ -2.05
LINCR-0001-203ENST00000524047 AMELXQ99217 191 aa2.25□□□□□ -2.05
LINCR-0001-203ENST00000524047 ITPR3Q14573 2671 aa2.24□□□□□ -2.05
LINCR-0001-203ENST00000524047 PDZD2O15018 2839 aa2.24□□□□□ -2.05
LINCR-0001-203ENST00000524047 MXRA5Q9NR99 2828 aa2.24□□□□□ -2.05
LINCR-0001-203ENST00000524047 IGKV3D-7A0A0C4DH55 119 aa2.24□□□□□ -2.05
LINCR-0001-203ENST00000524047 A0A0J9YXY3 114 aa2.24□□□□□ -2.05
LINCR-0001-203ENST00000524047 TRBV10-1A0A0K0K1A3 114 aa2.24□□□□□ -2.05
LINCR-0001-203ENST00000524047 F8WEM9 126 aa2.24□□□□□ -2.05
LINCR-0001-203ENST00000524047 H7C2G1 150 aa2.24□□□□□ -2.05
LINCR-0001-203ENST00000524047 ZNF73O43830 326 aaPredicted RBP2.24□□□□□ -2.05
LINCR-0001-203ENST00000524047 DNAL4O96015 105 aa2.24□□□□□ -2.05
LINCR-0001-203ENST00000524047 HTN1P15515 57 aa2.24□□□□□ -2.05
LINCR-0001-203ENST00000524047 RPL39P62891 51 aaKnown RBP2.24□□□□□ -2.05
LINCR-0001-203ENST00000524047 LCA10Q71F78 164 aa2.24□□□□□ -2.05
LINCR-0001-203ENST00000524047 C16orf74Q96GX8 76 aa2.24□□□□□ -2.05
LINCR-0001-203ENST00000524047 OBSCN-AS1Q96MR7 158 aa2.24□□□□□ -2.05
LINCR-0001-203ENST00000524047 LINC00167Q96N53 147 aa2.24□□□□□ -2.05
LINCR-0001-203ENST00000524047 ANAPC11Q9NYG5 84 aa2.24□□□□□ -2.05
LINCR-0001-203ENST00000524047 USP9YO00507 2555 aaPredicted RBP2.24□□□□□ -2.05
LINCR-0001-203ENST00000524047 LRRK2Q5S007 2527 aa2.24□□□□□ -2.05
LINCR-0001-203ENST00000524047 PTPN13Q12923 2485 aa2.24□□□□□ -2.05
LINCR-0001-203ENST00000524047 CREBBPQ92793 2442 aa2.23□□□□□ -2.05
LINCR-0001-203ENST00000524047 ZANQ9Y493 2812 aa2.23□□□□□ -2.05
LINCR-0001-203ENST00000524047 NAV2Q8IVL1 2488 aa2.23□□□□□ -2.05
LINCR-0001-203ENST00000524047 MIFP14174 115 aa2.23□□□□□ -2.05
LINCR-0001-203ENST00000524047 RPL28P46779 137 aaKnown RBP2.23□□□□□ -2.05
LINCR-0001-203ENST00000524047 ATP11AUNQ6ZP68 121 aa2.23□□□□□ -2.05
LINCR-0001-203ENST00000524047 CLEC2BQ92478 149 aa2.23□□□□□ -2.05
LINCR-0001-203ENST00000524047 CHCHD7Q9BUK0 85 aa2.23□□□□□ -2.05
LINCR-0001-203ENST00000524047 LINC00846Q9NV44 126 aa2.23□□□□□ -2.05
LINCR-0001-203ENST00000524047 WNK1Q9H4A3 2382 aa2.23□□□□□ -2.05
LINCR-0001-203ENST00000524047 POLQO75417 2590 aa2.22□□□□□ -2.05
LINCR-0001-203ENST00000524047 IGHV3OR16-12A0A075B7B8 117 aa2.22□□□□□ -2.05
LINCR-0001-203ENST00000524047 A0A087WVE0 104 aa2.22□□□□□ -2.05
LINCR-0001-203ENST00000524047 TRGV1A0A0A0MS02 117 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms