RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 TMEM170BQ5T4T1 132 aa10.85□□□□□ -0.67
PTP4A3-206ENST00000524028 A0A0U1RQV1 116 aa10.83□□□□□ -0.68
PTP4A3-206ENST00000524028 C3orf22Q8N5N4 141 aa10.83□□□□□ -0.68
PTP4A3-206ENST00000524028 CBLN2Q8IUK8 224 aa10.82□□□□□ -0.68
PTP4A3-206ENST00000524028 SFTA2Q6UW10 78 aa10.81□□□□□ -0.68
PTP4A3-206ENST00000524028 FAT4Q6V0I7 4981 aa10.81□□□□□ -0.68
PTP4A3-206ENST00000524028 LINC00158P58513 81 aa10.8□□□□□ -0.68
PTP4A3-206ENST00000524028 HIGD2AQ9BW72 106 aa10.8□□□□□ -0.68
PTP4A3-206ENST00000524028 CHTOPQ9Y3Y2 248 aaKnown RBP10.8□□□□□ -0.68
PTP4A3-206ENST00000524028 IGLV7-46A0A075B6I9 117 aa10.79□□□□□ -0.68
PTP4A3-206ENST00000524028 A0A0U1RRA0 63 aa10.79□□□□□ -0.68
PTP4A3-206ENST00000524028 TPRXLQ17RH7 258 aa10.79□□□□□ -0.68
PTP4A3-206ENST00000524028 TMEM223A0PJW6 202 aa10.78□□□□□ -0.68
PTP4A3-206ENST00000524028 CTAG1AP78358 180 aa10.78□□□□□ -0.68
PTP4A3-206ENST00000524028 LCE2AQ5TA79 106 aaPredicted RBP10.78□□□□□ -0.68
PTP4A3-206ENST00000524028 SPRR4Q96PI1 79 aa10.77□□□□□ -0.69
PTP4A3-206ENST00000524028 CDIP1Q9H305 208 aa10.77□□□□□ -0.69
PTP4A3-206ENST00000524028 MUC17Q685J3 4493 aa10.77□□□□□ -0.69
PTP4A3-206ENST00000524028 SMIM13P0DJ93 91 aa10.75□□□□□ -0.69
PTP4A3-206ENST00000524028 TRAV12-1A0A0B4J245 112 aa10.73□□□□□ -0.69
PTP4A3-206ENST00000524028 APOC3P02656 99 aa10.73□□□□□ -0.69
PTP4A3-206ENST00000524028 IFI27L1Q96BM0 104 aa10.73□□□□□ -0.69
PTP4A3-206ENST00000524028 PPDPFQ9H3Y8 114 aa10.73□□□□□ -0.69
PTP4A3-206ENST00000524028 KRTAP9-2Q9BYQ4 174 aa10.72□□□□□ -0.69
PTP4A3-206ENST00000524028 NCR3O14931 201 aa10.71□□□□□ -0.69
PTP4A3-206ENST00000524028 SPAG11AQ6PDA7 123 aa10.71□□□□□ -0.69
PTP4A3-206ENST00000524028 BOD1L2Q8IYS8 172 aa10.71□□□□□ -0.69
PTP4A3-206ENST00000524028 CHCHD1Q96BP2 118 aaKnown RBP10.71□□□□□ -0.69
PTP4A3-206ENST00000524028 YPEL4Q96NS1 127 aa10.71□□□□□ -0.69
PTP4A3-206ENST00000524028 PRYO14603 147 aa10.7□□□□□ -0.7
PTP4A3-206ENST00000524028 SPRR1AP35321 89 aa10.7□□□□□ -0.7
PTP4A3-206ENST00000524028 MIR7-3HGQ8N6C7 128 aa10.7□□□□□ -0.7
PTP4A3-206ENST00000524028 KCNQ1DNQ9H478 68 aa10.7□□□□□ -0.7
PTP4A3-206ENST00000524028 KRTAP4-16G5E9R7 235 aaPredicted RBP10.69□□□□□ -0.7
PTP4A3-206ENST00000524028 MEIG1Q5JSS6 88 aa10.69□□□□□ -0.7
PTP4A3-206ENST00000524028 DAND5Q8N907 189 aa10.69□□□□□ -0.7
PTP4A3-206ENST00000524028 ATP6V1G1O75348 118 aa10.68□□□□□ -0.7
PTP4A3-206ENST00000524028 SNAPINO95295 136 aa10.68□□□□□ -0.7
PTP4A3-206ENST00000524028 LINC00337Q8N6G1 96 aa10.68□□□□□ -0.7
PTP4A3-206ENST00000524028 SMCR5Q8TEV8 140 aa10.68□□□□□ -0.7
PTP4A3-206ENST00000524028 ZNF706Q9Y5V0 76 aaPredicted RBP10.68□□□□□ -0.7
PTP4A3-206ENST00000524028 SVBPQ8N300 66 aa10.67□□□□□ -0.7
PTP4A3-206ENST00000524028 Q8NBF4 154 aa10.67□□□□□ -0.7
PTP4A3-206ENST00000524028 HERV-K104P63124 156 aa10.66□□□□□ -0.7
PTP4A3-206ENST00000524028 FAM19A2Q8N3H0 131 aa10.66□□□□□ -0.7
PTP4A3-206ENST00000524028 TRBV10-3A0A0K0K1G6 114 aa10.65□□□□□ -0.7
PTP4A3-206ENST00000524028 NDUFA12Q9UI09 145 aa10.65□□□□□ -0.7
PTP4A3-206ENST00000524028 C4orf48Q5BLP8 95 aa10.64□□□□□ -0.71
PTP4A3-206ENST00000524028 FP248Q71RG6 208 aaPredicted RBP10.64□□□□□ -0.71
PTP4A3-206ENST00000524028 ETDCA0A1B0GVM5 59 aa10.63□□□□□ -0.71
PTP4A3-206ENST00000524028 TSPEAR-AS2P59090 65 aa10.63□□□□□ -0.71
PTP4A3-206ENST00000524028 NDUFA5Q16718 116 aa10.63□□□□□ -0.71
PTP4A3-206ENST00000524028 MYMXA0A1B0GTQ4 84 aa10.62□□□□□ -0.71
PTP4A3-206ENST00000524028 LINC00483Q53H64 154 aa10.62□□□□□ -0.71
PTP4A3-206ENST00000524028 LINC00587B1AMM8 73 aa10.61□□□□□ -0.71
PTP4A3-206ENST00000524028 H0Y8G0 127 aa10.61□□□□□ -0.71
PTP4A3-206ENST00000524028 HSBP1O75506 76 aa10.61□□□□□ -0.71
PTP4A3-206ENST00000524028 KRTAP13-3Q3SY46 172 aa10.61□□□□□ -0.71
PTP4A3-206ENST00000524028 B5MCH6 92 aa10.6□□□□□ -0.71
PTP4A3-206ENST00000524028 ERC2-IT1O76042 136 aa10.6□□□□□ -0.71
PTP4A3-206ENST00000524028 GAGE2AQ6NT46 116 aa10.59□□□□□ -0.71
PTP4A3-206ENST00000524028 MAP1LC3CQ9BXW4 147 aa10.59□□□□□ -0.71
PTP4A3-206ENST00000524028 LOC107984156A0A0G2JMH3 177 aa10.58□□□□□ -0.72
PTP4A3-206ENST00000524028 SPINK1P00995 79 aa10.58□□□□□ -0.72
PTP4A3-206ENST00000524028 LINC00310P59036 64 aa10.58□□□□□ -0.72
PTP4A3-206ENST00000524028 ARL17AQ8IVW1 177 aa10.58□□□□□ -0.72
PTP4A3-206ENST00000524028 LEPROTO15243 131 aa10.57□□□□□ -0.72
PTP4A3-206ENST00000524028 DDTP30046 118 aa10.56□□□□□ -0.72
PTP4A3-206ENST00000524028 Q9BRP9 147 aa10.56□□□□□ -0.72
PTP4A3-206ENST00000524028 MOBPQ13875 183 aa10.55□□□□□ -0.72
PTP4A3-206ENST00000524028 IGLV9-49A0A0B4J1Y8 123 aa10.54□□□□□ -0.72
PTP4A3-206ENST00000524028 TRBV10-2A0A0K0K1G8 114 aa10.54□□□□□ -0.72
PTP4A3-206ENST00000524028 LEPROTL1O95214 131 aa10.54□□□□□ -0.72
PTP4A3-206ENST00000524028 TRGC2P03986 189 aa10.54□□□□□ -0.72
PTP4A3-206ENST00000524028 ASB16-AS1Q495Z4 193 aa10.54□□□□□ -0.72
PTP4A3-206ENST00000524028 J3QQQ9 107 aa10.53□□□□□ -0.72
PTP4A3-206ENST00000524028 SERF1AO75920 110 aa10.53□□□□□ -0.72
PTP4A3-206ENST00000524028 S100A12P80511 92 aa10.53□□□□□ -0.72
PTP4A3-206ENST00000524028 KRTAP4-1Q9BYQ7 146 aa10.53□□□□□ -0.72
PTP4A3-206ENST00000524028 PLNP26678 52 aa10.52□□□□□ -0.73
PTP4A3-206ENST00000524028 Q6ZRX8 168 aa10.52□□□□□ -0.73
PTP4A3-206ENST00000524028 Q8N377 158 aa10.52□□□□□ -0.73
PTP4A3-206ENST00000524028 PMCHL2Q9BQD1 86 aa10.52□□□□□ -0.73
PTP4A3-206ENST00000524028 SSBP3-AS1Q7Z2R9 100 aa10.51□□□□□ -0.73
PTP4A3-206ENST00000524028 SPANXB1Q9NS25 103 aaPredicted RBP10.51□□□□□ -0.73
PTP4A3-206ENST00000524028 IGLV6-57P01721 117 aa10.5□□□□□ -0.73
PTP4A3-206ENST00000524028 EIF4EBP3O60516 100 aaPredicted RBP10.49□□□□□ -0.73
PTP4A3-206ENST00000524028 DPM2O94777 84 aa10.49□□□□□ -0.73
PTP4A3-206ENST00000524028 RPS29P62273 56 aaKnown RBP10.49□□□□□ -0.73
PTP4A3-206ENST00000524028 NDUFC2O95298 119 aa10.48□□□□□ -0.73
PTP4A3-206ENST00000524028 FABP4P15090 132 aa10.48□□□□□ -0.73
PTP4A3-206ENST00000524028 NMUP48645 174 aa10.48□□□□□ -0.73
PTP4A3-206ENST00000524028 SOSTDC1Q6X4U4 206 aa10.48□□□□□ -0.73
PTP4A3-206ENST00000524028 LGALS3P17931 250 aaKnown RBP10.47□□□□□ -0.73
PTP4A3-206ENST00000524028 HERVK_113P61574 105 aa10.47□□□□□ -0.73
PTP4A3-206ENST00000524028 S100A7L2Q5SY68 101 aa10.47□□□□□ -0.73
PTP4A3-206ENST00000524028 MIEN1Q9BRT3 115 aa10.47□□□□□ -0.73
PTP4A3-206ENST00000524028 TRAV23DV6A0A075B6W5 121 aa10.46□□□□□ -0.73
PTP4A3-206ENST00000524028 IGKCP01834 107 aa10.46□□□□□ -0.73
PTP4A3-206ENST00000524028 ADAMTSL4-AS1Q5T5F5 129 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms