RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 LOC107984640A0A0U1RRK4 108 aa3.19□□□□□ -1.9
CTNNA1-239ENST00000523685 K7EP34 96 aa3.19□□□□□ -1.9
CTNNA1-239ENST00000523685 NCR2O95944 276 aa3.19□□□□□ -1.9
CTNNA1-239ENST00000523685 RPL18AQ02543 176 aaKnown RBP3.19□□□□□ -1.9
CTNNA1-239ENST00000523685 C9orf116Q5BN46 136 aaPredicted RBP3.19□□□□□ -1.9
CTNNA1-239ENST00000523685 SLC25A34Q6PIV7 304 aa3.19□□□□□ -1.9
CTNNA1-239ENST00000523685 GTF2H5Q6ZYL4 71 aa3.19□□□□□ -1.9
CTNNA1-239ENST00000523685 PHF5AQ7RTV0 110 aaKnown RBP3.19□□□□□ -1.9
CTNNA1-239ENST00000523685 TSKUQ8WUA8 353 aa3.19□□□□□ -1.9
CTNNA1-239ENST00000523685 BORCS7Q96B45 105 aa3.19□□□□□ -1.9
CTNNA1-239ENST00000523685 PMCHL2Q9BQD1 86 aa3.19□□□□□ -1.9
CTNNA1-239ENST00000523685 OSTCQ9NRP0 149 aa3.19□□□□□ -1.9
CTNNA1-239ENST00000523685 PSORS1C2Q9UIG4 136 aa3.19□□□□□ -1.9
CTNNA1-239ENST00000523685 V9GYV3 84 aa3.19□□□□□ -1.9
CTNNA1-239ENST00000523685 I3L3M4 83 aa3.18□□□□□ -1.9
CTNNA1-239ENST00000523685 K7EN84 100 aa3.18□□□□□ -1.9
CTNNA1-239ENST00000523685 KRTAP10-12P60413 245 aa3.18□□□□□ -1.9
CTNNA1-239ENST00000523685 RNASE13Q5GAN3 156 aaKnown RBP3.18□□□□□ -1.9
CTNNA1-239ENST00000523685 Q6ZVH6 145 aa3.18□□□□□ -1.9
CTNNA1-239ENST00000523685 C18orf32Q8TCD1 76 aa3.18□□□□□ -1.9
CTNNA1-239ENST00000523685 MRAP2Q96G30 205 aa3.18□□□□□ -1.9
CTNNA1-239ENST00000523685 CAMK2N2Q96S95 79 aa3.18□□□□□ -1.9
CTNNA1-239ENST00000523685 RNASE7Q9H1E1 156 aaKnown RBP3.18□□□□□ -1.9
CTNNA1-239ENST00000523685 RPP21Q9H633 154 aaKnown RBP3.18□□□□□ -1.9
CTNNA1-239ENST00000523685 NAT8BQ9UHF3 227 aa3.18□□□□□ -1.9
CTNNA1-239ENST00000523685 TRAV13-1A0A0B4J241 112 aa3.17□□□□□ -1.9
CTNNA1-239ENST00000523685 SMIM27A0A1W2PRY6 76 aa3.17□□□□□ -1.9
CTNNA1-239ENST00000523685 COX7A2LO14548 114 aa3.17□□□□□ -1.9
CTNNA1-239ENST00000523685 APOMO95445 188 aa3.17□□□□□ -1.9
CTNNA1-239ENST00000523685 PRR4Q16378 134 aa3.17□□□□□ -1.9
CTNNA1-239ENST00000523685 ATP5L2Q7Z4Y8 100 aa3.17□□□□□ -1.9
CTNNA1-239ENST00000523685 C5orf38Q86SI9 138 aa3.17□□□□□ -1.9
CTNNA1-239ENST00000523685 CDC42SE2Q9NRR3 84 aa3.17□□□□□ -1.9
CTNNA1-239ENST00000523685 A6NDN8 102 aa3.16□□□□□ -1.9
CTNNA1-239ENST00000523685 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.16□□□□□ -1.9
CTNNA1-239ENST00000523685 H3BRM9 83 aa3.16□□□□□ -1.9
CTNNA1-239ENST00000523685 HSBP1O75506 76 aa3.16□□□□□ -1.9
CTNNA1-239ENST00000523685 IGLV7-43P04211 117 aa3.16□□□□□ -1.9
CTNNA1-239ENST00000523685 COX8AP10176 69 aa3.16□□□□□ -1.9
CTNNA1-239ENST00000523685 FCER1GP30273 86 aa3.16□□□□□ -1.9
CTNNA1-239ENST00000523685 KRTAP10-7P60409 375 aaPredicted RBP3.16□□□□□ -1.9
CTNNA1-239ENST00000523685 SPAG11BQ08648 103 aa3.16□□□□□ -1.9
CTNNA1-239ENST00000523685 FAM231DQ6ZW35 169 aa3.16□□□□□ -1.9
CTNNA1-239ENST00000523685 FA2HQ7L5A8 372 aa3.16□□□□□ -1.9
CTNNA1-239ENST00000523685 MTURNQ8N3F0 131 aa3.16□□□□□ -1.9
CTNNA1-239ENST00000523685 NUP35Q8NFH5 326 aa3.16□□□□□ -1.9
CTNNA1-239ENST00000523685 TYMSOSQ8TAI1 123 aa3.16□□□□□ -1.9
CTNNA1-239ENST00000523685 DIRC1Q969H9 104 aa3.16□□□□□ -1.9
CTNNA1-239ENST00000523685 CHCHD1Q96BP2 118 aaKnown RBP3.16□□□□□ -1.9
CTNNA1-239ENST00000523685 CNFNQ9BYD5 112 aa3.16□□□□□ -1.9
CTNNA1-239ENST00000523685 TMEM191AQ9H0A3 160 aa3.16□□□□□ -1.9
CTNNA1-239ENST00000523685 A0A1B0GXF2 115 aa3.15□□□□□ -1.91
CTNNA1-239ENST00000523685 FAM168BA1KXE4 195 aa3.15□□□□□ -1.91
CTNNA1-239ENST00000523685 H0Y9J4 135 aa3.15□□□□□ -1.91
CTNNA1-239ENST00000523685 SMKR1H3BMG3 65 aa3.15□□□□□ -1.91
CTNNA1-239ENST00000523685 SYS1-DBNDD2H3BUS1 97 aa3.15□□□□□ -1.91
CTNNA1-239ENST00000523685 UBE2D1P51668 147 aa3.15□□□□□ -1.91
CTNNA1-239ENST00000523685 HSD52Q0P140 79 aa3.15□□□□□ -1.91
CTNNA1-239ENST00000523685 Q1RN00 199 aa3.15□□□□□ -1.91
CTNNA1-239ENST00000523685 C2orf91Q6ZV80 131 aa3.15□□□□□ -1.91
CTNNA1-239ENST00000523685 FAM19A5Q7Z5A7 132 aaPredicted RBP3.15□□□□□ -1.91
CTNNA1-239ENST00000523685 ATOH7Q8N100 152 aa3.15□□□□□ -1.91
CTNNA1-239ENST00000523685 MUC2Q02817 5179 aa3.15□□□□□ -1.91
CTNNA1-239ENST00000523685 TRBV6-5A0A0K0K1A5 114 aa3.14□□□□□ -1.91
CTNNA1-239ENST00000523685 A0A0U1RQV1 116 aa3.14□□□□□ -1.91
CTNNA1-239ENST00000523685 A0A1W2PPM0 123 aa3.14□□□□□ -1.91
CTNNA1-239ENST00000523685 J3QR89 54 aa3.14□□□□□ -1.91
CTNNA1-239ENST00000523685 TSPAN13O95857 204 aa3.14□□□□□ -1.91
CTNNA1-239ENST00000523685 UBE2BP63146 152 aa3.14□□□□□ -1.91
CTNNA1-239ENST00000523685 LINC01545Q5VT33 79 aa3.14□□□□□ -1.91
CTNNA1-239ENST00000523685 Q6ZUT4 128 aa3.14□□□□□ -1.91
CTNNA1-239ENST00000523685 KRTAP11-1Q8IUC1 163 aa3.14□□□□□ -1.91
CTNNA1-239ENST00000523685 AMN1Q8IY45 258 aa3.14□□□□□ -1.91
CTNNA1-239ENST00000523685 FAM19A2Q8N3H0 131 aa3.14□□□□□ -1.91
CTNNA1-239ENST00000523685 SIGMAR1Q99720 223 aa3.14□□□□□ -1.91
CTNNA1-239ENST00000523685 HSPB8Q9UJY1 196 aa3.14□□□□□ -1.91
CTNNA1-239ENST00000523685 IGLV1-50A0A075B6I6 118 aa3.13□□□□□ -1.91
CTNNA1-239ENST00000523685 TRBV27A0A0K0K1C4 114 aa3.13□□□□□ -1.91
CTNNA1-239ENST00000523685 A8MWL6 223 aa3.13□□□□□ -1.91
CTNNA1-239ENST00000523685 LEPROTL1O95214 131 aa3.13□□□□□ -1.91
CTNNA1-239ENST00000523685 FABP2P12104 132 aa3.13□□□□□ -1.91
CTNNA1-239ENST00000523685 POLR2KP53803 58 aaKnown RBP3.13□□□□□ -1.91
CTNNA1-239ENST00000523685 SMAGPQ0VAQ4 97 aa3.13□□□□□ -1.91
CTNNA1-239ENST00000523685 KRTAP5-11Q6L8G4 156 aa3.13□□□□□ -1.91
CTNNA1-239ENST00000523685 ERASQ7Z444 233 aa3.13□□□□□ -1.91
CTNNA1-239ENST00000523685 BOD1L2Q8IYS8 172 aa3.13□□□□□ -1.91
CTNNA1-239ENST00000523685 UBE2D4Q9Y2X8 147 aa3.13□□□□□ -1.91
CTNNA1-239ENST00000523685 SPCS1Q9Y6A9 102 aa3.13□□□□□ -1.91
CTNNA1-239ENST00000523685 A0A1B0GUT8 65 aa3.12□□□□□ -1.91
CTNNA1-239ENST00000523685 HIGD1CA8MV81 97 aa3.12□□□□□ -1.91
CTNNA1-239ENST00000523685 M0QXV9 152 aa3.12□□□□□ -1.91
CTNNA1-239ENST00000523685 NDUFA1O15239 70 aa3.12□□□□□ -1.91
CTNNA1-239ENST00000523685 KRTAP1-4P0C5Y4 121 aa3.12□□□□□ -1.91
CTNNA1-239ENST00000523685 CKS1BP61024 79 aa3.12□□□□□ -1.91
CTNNA1-239ENST00000523685 HBBP68871 147 aa3.12□□□□□ -1.91
CTNNA1-239ENST00000523685 LCE1EQ5T753 118 aa3.12□□□□□ -1.91
CTNNA1-239ENST00000523685 UNQ6190/PRO20217Q6UXQ8 127 aa3.12□□□□□ -1.91
CTNNA1-239ENST00000523685 KIR2DL4Q99706 377 aa3.12□□□□□ -1.91
CTNNA1-239ENST00000523685 MAP1LC3CQ9BXW4 147 aa3.12□□□□□ -1.91
CTNNA1-239ENST00000523685 SPANXB1Q9NS25 103 aaPredicted RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms