RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 COX7CP15954 63 aa12.06□□□□□ -0.48
IKBKB-228ENST00000523517 C2orf48Q96LS8 159 aa12.06□□□□□ -0.48
IKBKB-228ENST00000523517 RPL18AQ02543 176 aaKnown RBP12.05□□□□□ -0.48
IKBKB-228ENST00000523517 IGLV6-57P01721 117 aa12.05□□□□□ -0.48
IKBKB-228ENST00000523517 GVQW2A0A096LPI5 108 aaPredicted RBP12.04□□□□□ -0.48
IKBKB-228ENST00000523517 HELZ2Q9BYK8 2649 aaKnown RBP12.04□□□□□ -0.48
IKBKB-228ENST00000523517 hADV29S1A0JD25 119 aa12.04□□□□□ -0.48
IKBKB-228ENST00000523517 LYPD5Q6UWN5 251 aa12.04□□□□□ -0.48
IKBKB-228ENST00000523517 A0A087WVE0 104 aa12.03□□□□□ -0.48
IKBKB-228ENST00000523517 WFDC9Q8NEX5 89 aa12.03□□□□□ -0.48
IKBKB-228ENST00000523517 SMIM20Q8N5G0 67 aa12.02□□□□□ -0.49
IKBKB-228ENST00000523517 C6orf48Q9UBA6 75 aa12.01□□□□□ -0.49
IKBKB-228ENST00000523517 WIPF1O43516 503 aa11.99□□□□□ -0.49
IKBKB-228ENST00000523517 ZNF561-AS1K7EIQ3 104 aa11.99□□□□□ -0.49
IKBKB-228ENST00000523517 ATP5EP2Q5VTU8 51 aa11.98□□□□□ -0.49
IKBKB-228ENST00000523517 CRYGAP11844 174 aa11.98□□□□□ -0.49
IKBKB-228ENST00000523517 RBM3P98179 157 aaKnown RBP11.98□□□□□ -0.49
IKBKB-228ENST00000523517 XAGE1AQ9HD64 81 aa11.98□□□□□ -0.49
IKBKB-228ENST00000523517 TRBV10-3A0A0K0K1G6 114 aa11.97□□□□□ -0.49
IKBKB-228ENST00000523517 USP17L23D6RBM5 183 aa11.97□□□□□ -0.49
IKBKB-228ENST00000523517 Q6ZQT0 140 aa11.96□□□□□ -0.49
IKBKB-228ENST00000523517 TRAV23DV6A0A075B6W5 121 aa11.96□□□□□ -0.5
IKBKB-228ENST00000523517 LOC110117498A0A087WWA1 95 aa11.96□□□□□ -0.5
IKBKB-228ENST00000523517 UBL5Q9BZL1 73 aa11.96□□□□□ -0.5
IKBKB-228ENST00000523517 LAMTOR3Q9UHA4 124 aa11.96□□□□□ -0.5
IKBKB-228ENST00000523517 WFDC10BQ8IUB3 73 aa11.95□□□□□ -0.5
IKBKB-228ENST00000523517 SERP2Q8N6R1 65 aa11.95□□□□□ -0.5
IKBKB-228ENST00000523517 Q6ZQY7 126 aa11.94□□□□□ -0.5
IKBKB-228ENST00000523517 DIRC1Q969H9 104 aa11.94□□□□□ -0.5
IKBKB-228ENST00000523517 TENM1Q9UKZ4 2725 aa11.93□□□□□ -0.5
IKBKB-228ENST00000523517 OTOGQ6ZRI0 2925 aa11.93□□□□□ -0.5
IKBKB-228ENST00000523517 HIGD2BQ4VC39 106 aa11.93□□□□□ -0.5
IKBKB-228ENST00000523517 KPRPQ5T749 579 aaPredicted RBP11.93□□□□□ -0.5
IKBKB-228ENST00000523517 H3BNG1 76 aa11.92□□□□□ -0.5
IKBKB-228ENST00000523517 SVIPQ8NHG7 77 aa11.92□□□□□ -0.5
IKBKB-228ENST00000523517 KMT2BQ9UMN6 2715 aaPredicted RBP11.92□□□□□ -0.5
IKBKB-228ENST00000523517 H3BQ85 93 aa11.92□□□□□ -0.5
IKBKB-228ENST00000523517 KRTAP26-1Q6PEX3 210 aa11.92□□□□□ -0.5
IKBKB-228ENST00000523517 CAMK2N2Q96S95 79 aa11.92□□□□□ -0.5
IKBKB-228ENST00000523517 NOTCH2Q04721 2471 aa11.91□□□□□ -0.5
IKBKB-228ENST00000523517 RETNQ9HD89 108 aa11.91□□□□□ -0.5
IKBKB-228ENST00000523517 ZNF73O43830 326 aaPredicted RBP11.91□□□□□ -0.5
IKBKB-228ENST00000523517 FAM19A1Q7Z5A9 133 aa11.91□□□□□ -0.5
IKBKB-228ENST00000523517 DSCR8Q96T75 97 aa11.9□□□□□ -0.51
IKBKB-228ENST00000523517 COX7BP24311 80 aa11.89□□□□□ -0.51
IKBKB-228ENST00000523517 VPREB1P12018 145 aa11.89□□□□□ -0.51
IKBKB-228ENST00000523517 EGFEM1PQ0D2K5 195 aa11.89□□□□□ -0.51
IKBKB-228ENST00000523517 UPK3BQ9BT76 320 aa11.89□□□□□ -0.51
IKBKB-228ENST00000523517 HECTD1Q9ULT8 2610 aa11.88□□□□□ -0.51
IKBKB-228ENST00000523517 M0R2N4 97 aa11.88□□□□□ -0.51
IKBKB-228ENST00000523517 NSD1Q96L73 2696 aaPredicted RBP11.88□□□□□ -0.51
IKBKB-228ENST00000523517 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.87□□□□□ -0.51
IKBKB-228ENST00000523517 Q6ZRU5 148 aa11.87□□□□□ -0.51
IKBKB-228ENST00000523517 Q6ZTC4 211 aa11.87□□□□□ -0.51
IKBKB-228ENST00000523517 CYSTM1Q9H1C7 97 aa11.87□□□□□ -0.51
IKBKB-228ENST00000523517 PDE6GP18545 87 aa11.87□□□□□ -0.51
IKBKB-228ENST00000523517 ELOF1P60002 83 aaKnown RBP11.87□□□□□ -0.51
IKBKB-228ENST00000523517 OXLD1Q5BKU9 147 aa11.86□□□□□ -0.51
IKBKB-228ENST00000523517 C15orf56Q8N910 161 aa11.86□□□□□ -0.51
IKBKB-228ENST00000523517 TRBV7-6A0A0J9YX20 115 aa11.86□□□□□ -0.51
IKBKB-228ENST00000523517 TRRAPQ9Y4A5 3859 aa11.85□□□□□ -0.51
IKBKB-228ENST00000523517 M0R378 163 aa11.85□□□□□ -0.51
IKBKB-228ENST00000523517 KRTAP10-11P60412 298 aa11.85□□□□□ -0.51
IKBKB-228ENST00000523517 ESRGQ1W209 222 aa11.85□□□□□ -0.51
IKBKB-228ENST00000523517 GHRHP01286 108 aa11.84□□□□□ -0.51
IKBKB-228ENST00000523517 NDUFC2-KCTD14E9PQ53 114 aa11.84□□□□□ -0.51
IKBKB-228ENST00000523517 Q6ZVQ6 151 aa11.83□□□□□ -0.52
IKBKB-228ENST00000523517 HIVEP1P15822 2718 aa11.82□□□□□ -0.52
IKBKB-228ENST00000523517 ATRQ13535 2644 aa11.82□□□□□ -0.52
IKBKB-228ENST00000523517 LINC01547P58512 204 aaPredicted RBP11.82□□□□□ -0.52
IKBKB-228ENST00000523517 C1orf43Q9BWL3 253 aa11.81□□□□□ -0.52
IKBKB-228ENST00000523517 TRBV7-4A0A0J9YYF1 115 aa11.81□□□□□ -0.52
IKBKB-228ENST00000523517 HAMPP81172 84 aa11.8□□□□□ -0.52
IKBKB-228ENST00000523517 TEP1Q99973 2627 aaKnown RBP11.8□□□□□ -0.52
IKBKB-228ENST00000523517 LINC01556Q5JQF7 62 aa11.78□□□□□ -0.52
IKBKB-228ENST00000523517 TMEM258P61165 79 aa11.78□□□□□ -0.52
IKBKB-228ENST00000523517 Q6ZRP5 223 aa11.78□□□□□ -0.52
IKBKB-228ENST00000523517 LINC00528Q8N1L1 170 aa11.78□□□□□ -0.52
IKBKB-228ENST00000523517 IGKV2D-24A0A075B6R9 120 aa11.77□□□□□ -0.52
IKBKB-228ENST00000523517 F8WDY8 70 aa11.76□□□□□ -0.53
IKBKB-228ENST00000523517 J3KT08 172 aa11.76□□□□□ -0.53
IKBKB-228ENST00000523517 DEFB131BA0A096LNP1 70 aa11.75□□□□□ -0.53
IKBKB-228ENST00000523517 LOC107984640A0A0U1RRK4 108 aa11.75□□□□□ -0.53
IKBKB-228ENST00000523517 CXCL6P80162 114 aa11.75□□□□□ -0.53
IKBKB-228ENST00000523517 SYCNQ0VAF6 134 aa11.75□□□□□ -0.53
IKBKB-228ENST00000523517 BCE1O60756 84 aa11.73□□□□□ -0.53
IKBKB-228ENST00000523517 RPS28P62857 69 aaKnown RBP11.73□□□□□ -0.53
IKBKB-228ENST00000523517 C11orf45Q8TAV5 145 aa11.72□□□□□ -0.53
IKBKB-228ENST00000523517 DPH3Q96FX2 82 aa11.69□□□□□ -0.54
IKBKB-228ENST00000523517 KCNQ1DNQ9H478 68 aa11.69□□□□□ -0.54
IKBKB-228ENST00000523517 TRAV7A0A075B6U4 112 aa11.69□□□□□ -0.54
IKBKB-228ENST00000523517 TRAV10A0A0B4J240 114 aa11.68□□□□□ -0.54
IKBKB-228ENST00000523517 DNAH10OSP0CZ25 163 aa11.68□□□□□ -0.54
IKBKB-228ENST00000523517 SERTAD4-AS1Q5TG53 156 aa11.68□□□□□ -0.54
IKBKB-228ENST00000523517 C20orf197Q8N268 126 aa11.68□□□□□ -0.54
IKBKB-228ENST00000523517 NKAPP1Q8N9T2 125 aa11.68□□□□□ -0.54
IKBKB-228ENST00000523517 SCXQ7RTU7 201 aa11.67□□□□□ -0.54
IKBKB-228ENST00000523517 C7orf33Q8WU49 177 aa11.67□□□□□ -0.54
IKBKB-228ENST00000523517 TLX1NBP0CAT3 122 aa11.63□□□□□ -0.55
IKBKB-228ENST00000523517 KRTAP24-1Q3LI83 254 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms