RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 IGLC3P0DOY3 106 aa12.76□□□□□ -0.37
PVT1-218ENST00000523328 SEC61BP60468 96 aaKnown RBP12.76□□□□□ -0.37
PVT1-218ENST00000523328 ZNF625Q96I27 306 aaPredicted RBP12.75□□□□□ -0.37
PVT1-218ENST00000523328 ZNF22P17026 224 aaPredicted RBP12.74□□□□□ -0.37
PVT1-218ENST00000523328 ZNF706Q9Y5V0 76 aaPredicted RBP12.73□□□□□ -0.37
PVT1-218ENST00000523328 SPINK1P00995 79 aa12.72□□□□□ -0.37
PVT1-218ENST00000523328 A0A1B0GVG6 124 aa12.7□□□□□ -0.38
PVT1-218ENST00000523328 LCE2CQ5TA81 110 aa12.67□□□□□ -0.38
PVT1-218ENST00000523328 FA2HQ7L5A8 372 aa12.66□□□□□ -0.38
PVT1-218ENST00000523328 TRAV9-1A0A075B6T8 112 aa12.65□□□□□ -0.38
PVT1-218ENST00000523328 NDUFA6P56556 154 aa12.65□□□□□ -0.38
PVT1-218ENST00000523328 SFTA2Q6UW10 78 aa12.65□□□□□ -0.38
PVT1-218ENST00000523328 SMCR5Q8TEV8 140 aa12.65□□□□□ -0.38
PVT1-218ENST00000523328 A0A096LNJ9 63 aa12.64□□□□□ -0.39
PVT1-218ENST00000523328 PRYO14603 147 aa12.64□□□□□ -0.39
PVT1-218ENST00000523328 SPRR1AP35321 89 aa12.64□□□□□ -0.39
PVT1-218ENST00000523328 SMCO4Q9NRQ5 59 aa12.64□□□□□ -0.39
PVT1-218ENST00000523328 LINC00158P58513 81 aa12.63□□□□□ -0.39
PVT1-218ENST00000523328 LINC00483Q53H64 154 aa12.63□□□□□ -0.39
PVT1-218ENST00000523328 Q8N377 158 aa12.63□□□□□ -0.39
PVT1-218ENST00000523328 NDUFA12Q9UI09 145 aa12.63□□□□□ -0.39
PVT1-218ENST00000523328 KRTAP4-16G5E9R7 235 aaPredicted RBP12.62□□□□□ -0.39
PVT1-218ENST00000523328 RPS29P62273 56 aaKnown RBP12.62□□□□□ -0.39
PVT1-218ENST00000523328 XP32Q5T750 250 aa12.62□□□□□ -0.39
PVT1-218ENST00000523328 C11orf86A6NJI1 115 aa12.61□□□□□ -0.39
PVT1-218ENST00000523328 FAM19A2Q8N3H0 131 aa12.6□□□□□ -0.39
PVT1-218ENST00000523328 KCNQ1DNQ9H478 68 aa12.6□□□□□ -0.39
PVT1-218ENST00000523328 A0A0U1RRA0 63 aa12.59□□□□□ -0.39
PVT1-218ENST00000523328 KRTAP19-2Q3LHN2 52 aa12.59□□□□□ -0.39
PVT1-218ENST00000523328 TMEM170BQ5T4T1 132 aa12.58□□□□□ -0.4
PVT1-218ENST00000523328 MOBPQ13875 183 aa12.57□□□□□ -0.4
PVT1-218ENST00000523328 GAGE2AQ6NT46 116 aa12.57□□□□□ -0.4
PVT1-218ENST00000523328 ETDCA0A1B0GVM5 59 aa12.56□□□□□ -0.4
PVT1-218ENST00000523328 URB1-AS1Q96HZ7 61 aa12.56□□□□□ -0.4
PVT1-218ENST00000523328 NCR3O14931 201 aa12.55□□□□□ -0.4
PVT1-218ENST00000523328 SSBP3-AS1Q7Z2R9 100 aa12.55□□□□□ -0.4
PVT1-218ENST00000523328 BOD1L2Q8IYS8 172 aa12.55□□□□□ -0.4
PVT1-218ENST00000523328 IGLV9-49A0A0B4J1Y8 123 aa12.54□□□□□ -0.4
PVT1-218ENST00000523328 SLC25A20O43772 301 aa12.54□□□□□ -0.4
PVT1-218ENST00000523328 FABP9Q0Z7S8 132 aa12.54□□□□□ -0.4
PVT1-218ENST00000523328 BAGE3Q86Y29 109 aa12.54□□□□□ -0.4
PVT1-218ENST00000523328 MT1HP80294 61 aa12.53□□□□□ -0.4
PVT1-218ENST00000523328 COX19Q49B96 90 aa12.53□□□□□ -0.4
PVT1-218ENST00000523328 TRBV10-3A0A0K0K1G6 114 aa12.52□□□□□ -0.41
PVT1-218ENST00000523328 ERC2-IT1O76042 136 aa12.52□□□□□ -0.41
PVT1-218ENST00000523328 HBDP02042 147 aa12.52□□□□□ -0.41
PVT1-218ENST00000523328 SMIM13P0DJ93 91 aa12.52□□□□□ -0.41
PVT1-218ENST00000523328 S100PP25815 95 aa12.52□□□□□ -0.41
PVT1-218ENST00000523328 PMCHL1Q16048 86 aa12.52□□□□□ -0.41
PVT1-218ENST00000523328 B5MCH6 92 aa12.49□□□□□ -0.41
PVT1-218ENST00000523328 LINC00614P0C842 121 aa12.49□□□□□ -0.41
PVT1-218ENST00000523328 MIR7-3HGQ8N6C7 128 aa12.49□□□□□ -0.41
PVT1-218ENST00000523328 TMEM223A0PJW6 202 aa12.48□□□□□ -0.41
PVT1-218ENST00000523328 ATP6V1G1O75348 118 aa12.48□□□□□ -0.41
PVT1-218ENST00000523328 C18orf32Q8TCD1 76 aa12.48□□□□□ -0.41
PVT1-218ENST00000523328 TMEM218A2RU14 115 aa12.46□□□□□ -0.41
PVT1-218ENST00000523328 Q9BRP9 147 aa12.46□□□□□ -0.41
PVT1-218ENST00000523328 CHTOPQ9Y3Y2 248 aaKnown RBP12.46□□□□□ -0.41
PVT1-218ENST00000523328 MEIG1Q5JSS6 88 aa12.45□□□□□ -0.42
PVT1-218ENST00000523328 CFC1BP0CG36 223 aa12.44□□□□□ -0.42
PVT1-218ENST00000523328 SEC11CQ9BY50 192 aa12.44□□□□□ -0.42
PVT1-218ENST00000523328 CLLU1Q5K131 121 aa12.42□□□□□ -0.42
PVT1-218ENST00000523328 LORP23490 312 aaPredicted RBP12.41□□□□□ -0.42
PVT1-218ENST00000523328 HERV-K104P63124 156 aa12.41□□□□□ -0.42
PVT1-218ENST00000523328 S100A12P80511 92 aa12.41□□□□□ -0.42
PVT1-218ENST00000523328 UQCC3Q6UW78 93 aa12.41□□□□□ -0.42
PVT1-218ENST00000523328 Q6ZRX8 168 aa12.41□□□□□ -0.42
PVT1-218ENST00000523328 PCOTHQ58A44 107 aa12.4□□□□□ -0.42
PVT1-218ENST00000523328 DDTP30046 118 aa12.38□□□□□ -0.43
PVT1-218ENST00000523328 IGLV8-61A0A075B6I0 122 aa12.37□□□□□ -0.43
PVT1-218ENST00000523328 TRAV12-1A0A0B4J245 112 aa12.37□□□□□ -0.43
PVT1-218ENST00000523328 LINC00587B1AMM8 73 aa12.37□□□□□ -0.43
PVT1-218ENST00000523328 KRTAP10-6P60371 365 aaPredicted RBP12.37□□□□□ -0.43
PVT1-218ENST00000523328 C9orf153Q5TBE3 101 aa12.37□□□□□ -0.43
PVT1-218ENST00000523328 LOC107984156A0A0G2JMH3 177 aa12.36□□□□□ -0.43
PVT1-218ENST00000523328 ARL17AQ8IVW1 177 aa12.36□□□□□ -0.43
PVT1-218ENST00000523328 TRAPPC1Q9Y5R8 145 aa12.36□□□□□ -0.43
PVT1-218ENST00000523328 TRBV10-2A0A0K0K1G8 114 aa12.35□□□□□ -0.43
PVT1-218ENST00000523328 MAP1LC3CQ9BXW4 147 aa12.34□□□□□ -0.43
PVT1-218ENST00000523328 MYMXA0A1B0GTQ4 84 aa12.32□□□□□ -0.44
PVT1-218ENST00000523328 IFI27L1Q96BM0 104 aa12.32□□□□□ -0.44
PVT1-218ENST00000523328 RPS10P5Q9NQ39 176 aa12.3□□□□□ -0.44
PVT1-218ENST00000523328 C9orf92A6NGG3 77 aa12.29□□□□□ -0.44
PVT1-218ENST00000523328 RHEBQ15382 184 aa12.29□□□□□ -0.44
PVT1-218ENST00000523328 ST20-AS1Q8NBB2 130 aa12.29□□□□□ -0.44
PVT1-218ENST00000523328 IGLV6-57P01721 117 aa12.28□□□□□ -0.44
PVT1-218ENST00000523328 TSPEAR-AS2P59090 65 aa12.28□□□□□ -0.44
PVT1-218ENST00000523328 JOSD1Q15040 202 aaPredicted RBP12.28□□□□□ -0.44
PVT1-218ENST00000523328 SPANXB1Q9NS25 103 aaPredicted RBP12.28□□□□□ -0.44
PVT1-218ENST00000523328 C10orf91Q5T1B1 145 aa12.26□□□□□ -0.45
PVT1-218ENST00000523328 LIMD2Q9BT23 127 aa12.25□□□□□ -0.45
PVT1-218ENST00000523328 TRAV23DV6A0A075B6W5 121 aa12.24□□□□□ -0.45
PVT1-218ENST00000523328 S100A7L2Q5SY68 101 aa12.24□□□□□ -0.45
PVT1-218ENST00000523328 NDUFC2O95298 119 aa12.23□□□□□ -0.45
PVT1-218ENST00000523328 CHCHD1Q96BP2 118 aaKnown RBP12.23□□□□□ -0.45
PVT1-218ENST00000523328 C5orf52A6NGY3 159 aa12.22□□□□□ -0.45
PVT1-218ENST00000523328 ZNF73O43830 326 aaPredicted RBP12.22□□□□□ -0.45
PVT1-218ENST00000523328 HRCT1Q6UXD1 115 aa12.22□□□□□ -0.45
PVT1-218ENST00000523328 FLGP20930 4061 aaPredicted RBP12.21□□□□□ -0.46
PVT1-218ENST00000523328 LEPROTO15243 131 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms