RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 LINC00158P58513 81 aa8.84□□□□□ -0.99
MRPS28-209ENST00000522987 UQCC3Q6UW78 93 aa8.84□□□□□ -0.99
MRPS28-209ENST00000522987 PPDPFQ9H3Y8 114 aa8.84□□□□□ -0.99
MRPS28-209ENST00000522987 RPS10P5Q9NQ39 176 aa8.84□□□□□ -0.99
MRPS28-209ENST00000522987 BAGE3Q86Y29 109 aa8.83□□□□□ -1
MRPS28-209ENST00000522987 C18orf32Q8TCD1 76 aa8.83□□□□□ -1
MRPS28-209ENST00000522987 SEC11CQ9BY50 192 aa8.83□□□□□ -1
MRPS28-209ENST00000522987 HBDP02042 147 aa8.82□□□□□ -1
MRPS28-209ENST00000522987 IFITM2Q01629 132 aa8.82□□□□□ -1
MRPS28-209ENST00000522987 COX17Q14061 63 aa8.82□□□□□ -1
MRPS28-209ENST00000522987 COX19Q49B96 90 aa8.82□□□□□ -1
MRPS28-209ENST00000522987 DAND5Q8N907 189 aa8.82□□□□□ -1
MRPS28-209ENST00000522987 LINC00614P0C842 121 aa8.81□□□□□ -1
MRPS28-209ENST00000522987 LCE2DQ5TA82 110 aaPredicted RBP8.81□□□□□ -1
MRPS28-209ENST00000522987 SPRR4Q96PI1 79 aa8.81□□□□□ -1
MRPS28-209ENST00000522987 NCR3O14931 201 aa8.8□□□□□ -1
MRPS28-209ENST00000522987 COMMD7Q86VX2 200 aa8.8□□□□□ -1
MRPS28-209ENST00000522987 TRAPPC1Q9Y5R8 145 aa8.8□□□□□ -1
MRPS28-209ENST00000522987 SMIM13P0DJ93 91 aa8.78□□□□□ -1
MRPS28-209ENST00000522987 CHTOPQ9Y3Y2 248 aaKnown RBP8.78□□□□□ -1
MRPS28-209ENST00000522987 C4orf48Q5BLP8 95 aa8.77□□□□□ -1.01
MRPS28-209ENST00000522987 Q8NBF4 154 aa8.77□□□□□ -1.01
MRPS28-209ENST00000522987 ATP6V1G1O75348 118 aa8.76□□□□□ -1.01
MRPS28-209ENST00000522987 MEIG1Q5JSS6 88 aa8.76□□□□□ -1.01
MRPS28-209ENST00000522987 BOD1L2Q8IYS8 172 aa8.76□□□□□ -1.01
MRPS28-209ENST00000522987 TMEM223A0PJW6 202 aa8.75□□□□□ -1.01
MRPS28-209ENST00000522987 RHEBQ15382 184 aa8.75□□□□□ -1.01
MRPS28-209ENST00000522987 SMCR5Q8TEV8 140 aa8.75□□□□□ -1.01
MRPS28-209ENST00000522987 SPAG11AQ6PDA7 123 aa8.74□□□□□ -1.01
MRPS28-209ENST00000522987 LINC00337Q8N6G1 96 aa8.74□□□□□ -1.01
MRPS28-209ENST00000522987 PRYO14603 147 aa8.73□□□□□ -1.01
MRPS28-209ENST00000522987 SFTA2Q6UW10 78 aa8.73□□□□□ -1.01
MRPS28-209ENST00000522987 MIR7-3HGQ8N6C7 128 aa8.73□□□□□ -1.01
MRPS28-209ENST00000522987 ZNF706Q9Y5V0 76 aaPredicted RBP8.73□□□□□ -1.01
MRPS28-209ENST00000522987 KRTAP9-6A0A140TA67 174 aa8.72□□□□□ -1.01
MRPS28-209ENST00000522987 ETDCA0A1B0GVM5 59 aa8.72□□□□□ -1.01
MRPS28-209ENST00000522987 C10orf91Q5T1B1 145 aa8.72□□□□□ -1.01
MRPS28-209ENST00000522987 TRBV10-3A0A0K0K1G6 114 aa8.71□□□□□ -1.02
MRPS28-209ENST00000522987 KRTAP13-3Q3SY46 172 aa8.71□□□□□ -1.02
MRPS28-209ENST00000522987 GAGE2AQ6NT46 116 aa8.71□□□□□ -1.02
MRPS28-209ENST00000522987 IGLV9-49A0A0B4J1Y8 123 aa8.7□□□□□ -1.02
MRPS28-209ENST00000522987 H0Y8G0 127 aa8.7□□□□□ -1.02
MRPS28-209ENST00000522987 CTAG1AP78358 180 aa8.7□□□□□ -1.02
MRPS28-209ENST00000522987 FP248Q71RG6 208 aaPredicted RBP8.7□□□□□ -1.02
MRPS28-209ENST00000522987 IFI27L1Q96BM0 104 aa8.7□□□□□ -1.02
MRPS28-209ENST00000522987 KRTAP4-1Q9BYQ7 146 aa8.7□□□□□ -1.02
MRPS28-209ENST00000522987 MOBPQ13875 183 aa8.69□□□□□ -1.02
MRPS28-209ENST00000522987 ERC2-IT1O76042 136 aa8.68□□□□□ -1.02
MRPS28-209ENST00000522987 SPRR1AP35321 89 aa8.68□□□□□ -1.02
MRPS28-209ENST00000522987 KRTAP4-16G5E9R7 235 aaPredicted RBP8.67□□□□□ -1.02
MRPS28-209ENST00000522987 APOC3P02656 99 aa8.67□□□□□ -1.02
MRPS28-209ENST00000522987 FAM19A2Q8N3H0 131 aa8.67□□□□□ -1.02
MRPS28-209ENST00000522987 KCNQ1DNQ9H478 68 aa8.67□□□□□ -1.02
MRPS28-209ENST00000522987 NDUFA12Q9UI09 145 aa8.67□□□□□ -1.02
MRPS28-209ENST00000522987 TRAV12-1A0A0B4J245 112 aa8.66□□□□□ -1.02
MRPS28-209ENST00000522987 TSPEAR-AS2P59090 65 aa8.65□□□□□ -1.02
MRPS28-209ENST00000522987 B5MCH6 92 aa8.64□□□□□ -1.03
MRPS28-209ENST00000522987 SPINK1P00995 79 aa8.64□□□□□ -1.03
MRPS28-209ENST00000522987 HERV-K104P63124 156 aa8.64□□□□□ -1.03
MRPS28-209ENST00000522987 ASB16-AS1Q495Z4 193 aa8.64□□□□□ -1.03
MRPS28-209ENST00000522987 MYMXA0A1B0GTQ4 84 aa8.63□□□□□ -1.03
MRPS28-209ENST00000522987 LINC00483Q53H64 154 aa8.63□□□□□ -1.03
MRPS28-209ENST00000522987 CHCHD1Q96BP2 118 aaKnown RBP8.63□□□□□ -1.03
MRPS28-209ENST00000522987 DDTP30046 118 aa8.62□□□□□ -1.03
MRPS28-209ENST00000522987 LINC01547P58512 204 aaPredicted RBP8.62□□□□□ -1.03
MRPS28-209ENST00000522987 Q9BRP9 147 aa8.62□□□□□ -1.03
MRPS28-209ENST00000522987 S100A12P80511 92 aa8.61□□□□□ -1.03
MRPS28-209ENST00000522987 Q8N377 158 aa8.61□□□□□ -1.03
MRPS28-209ENST00000522987 MAP1LC3CQ9BXW4 147 aa8.61□□□□□ -1.03
MRPS28-209ENST00000522987 HSBP1O75506 76 aa8.6□□□□□ -1.03
MRPS28-209ENST00000522987 NPC2P61916 151 aa8.6□□□□□ -1.03
MRPS28-209ENST00000522987 SNAPINO95295 136 aa8.59□□□□□ -1.03
MRPS28-209ENST00000522987 SEC61BP60468 96 aaKnown RBP8.59□□□□□ -1.03
MRPS28-209ENST00000522987 C9orf153Q5TBE3 101 aa8.59□□□□□ -1.03
MRPS28-209ENST00000522987 PMCHL2Q9BQD1 86 aa8.59□□□□□ -1.03
MRPS28-209ENST00000522987 LINC00587B1AMM8 73 aa8.58□□□□□ -1.04
MRPS28-209ENST00000522987 LEPROTO15243 131 aa8.58□□□□□ -1.04
MRPS28-209ENST00000522987 YPEL4Q96NS1 127 aa8.58□□□□□ -1.04
MRPS28-209ENST00000522987 NDUFA5Q16718 116 aa8.57□□□□□ -1.04
MRPS28-209ENST00000522987 Q6ZRX8 168 aa8.57□□□□□ -1.04
MRPS28-209ENST00000522987 SVBPQ8N300 66 aa8.57□□□□□ -1.04
MRPS28-209ENST00000522987 S100A7L2Q5SY68 101 aa8.56□□□□□ -1.04
MRPS28-209ENST00000522987 SSBP3-AS1Q7Z2R9 100 aa8.56□□□□□ -1.04
MRPS28-209ENST00000522987 ST20-AS1Q8NBB2 130 aa8.56□□□□□ -1.04
MRPS28-209ENST00000522987 J3QQQ9 107 aa8.55□□□□□ -1.04
MRPS28-209ENST00000522987 SLC25A20O43772 301 aa8.55□□□□□ -1.04
MRPS28-209ENST00000522987 MIEN1Q9BRT3 115 aa8.55□□□□□ -1.04
MRPS28-209ENST00000522987 TRBV10-2A0A0K0K1G8 114 aa8.54□□□□□ -1.04
MRPS28-209ENST00000522987 EIF4EBP3O60516 100 aaPredicted RBP8.54□□□□□ -1.04
MRPS28-209ENST00000522987 LEPROTL1O95214 131 aa8.54□□□□□ -1.04
MRPS28-209ENST00000522987 FABP4P15090 132 aa8.54□□□□□ -1.04
MRPS28-209ENST00000522987 XP32Q5T750 250 aa8.54□□□□□ -1.04
MRPS28-209ENST00000522987 SPANXB1Q9NS25 103 aaPredicted RBP8.54□□□□□ -1.04
MRPS28-209ENST00000522987 TRAV23DV6A0A075B6W5 121 aa8.53□□□□□ -1.04
MRPS28-209ENST00000522987 SERF1AO75920 110 aa8.53□□□□□ -1.04
MRPS28-209ENST00000522987 LGALS3P17931 250 aaKnown RBP8.53□□□□□ -1.04
MRPS28-209ENST00000522987 LINC00310P59036 64 aa8.53□□□□□ -1.04
MRPS28-209ENST00000522987 HRCT1Q6UXD1 115 aa8.53□□□□□ -1.04
MRPS28-209ENST00000522987 SOSTDC1Q6X4U4 206 aa8.53□□□□□ -1.04
MRPS28-209ENST00000522987 LOC107984156A0A0G2JMH3 177 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 214.5 ms