RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 SLPIP03973 132 aa10.12□□□□□ -0.79
CTNNA1-236ENST00000522792 PPDPFQ9H3Y8 114 aa10.12□□□□□ -0.79
CTNNA1-236ENST00000522792 CARD19Q96LW7 228 aa10.11□□□□□ -0.79
CTNNA1-236ENST00000522792 A0A1W2PPM0 123 aa10.1□□□□□ -0.79
CTNNA1-236ENST00000522792 F8WDY8 70 aa10.1□□□□□ -0.79
CTNNA1-236ENST00000522792 RPL13AP40429 203 aaKnown RBP10.09□□□□□ -0.79
CTNNA1-236ENST00000522792 Q1RN00 199 aa10.09□□□□□ -0.79
CTNNA1-236ENST00000522792 IGKV2-28A0A075B6P5 120 aa10.09□□□□□ -0.79
CTNNA1-236ENST00000522792 IGKV2D-28P01615 120 aa10.09□□□□□ -0.79
CTNNA1-236ENST00000522792 Q6ZRN7 208 aaPredicted RBP10.09□□□□□ -0.79
CTNNA1-236ENST00000522792 XAGE1AQ9HD64 81 aa10.09□□□□□ -0.79
CTNNA1-236ENST00000522792 C3orf84H3BNL1 204 aa10.08□□□□□ -0.8
CTNNA1-236ENST00000522792 LINC00476Q8WZB0 136 aa10.08□□□□□ -0.8
CTNNA1-236ENST00000522792 LOC107984156A0A0G2JMH3 177 aa10.07□□□□□ -0.8
CTNNA1-236ENST00000522792 ARL17AQ8IVW1 177 aa10.07□□□□□ -0.8
CTNNA1-236ENST00000522792 Q8NDZ9 215 aa10.07□□□□□ -0.8
CTNNA1-236ENST00000522792 NDUFC2-KCTD14E9PQ53 114 aa10.07□□□□□ -0.8
CTNNA1-236ENST00000522792 SCGB1A1P11684 91 aa10.07□□□□□ -0.8
CTNNA1-236ENST00000522792 FABP2P12104 132 aa10.07□□□□□ -0.8
CTNNA1-236ENST00000522792 PRR3P79522 188 aaKnown RBP10.07□□□□□ -0.8
CTNNA1-236ENST00000522792 Q6ZR54 194 aa10.07□□□□□ -0.8
CTNNA1-236ENST00000522792 GAGE2EQ4V326 116 aa10.06□□□□□ -0.8
CTNNA1-236ENST00000522792 LINC00337Q8N6G1 96 aa10.06□□□□□ -0.8
CTNNA1-236ENST00000522792 GAGE2DQ9UEU5 116 aa10.06□□□□□ -0.8
CTNNA1-236ENST00000522792 PSMB2P49721 201 aa10.06□□□□□ -0.8
CTNNA1-236ENST00000522792 Q6ZRP5 223 aa10.06□□□□□ -0.8
CTNNA1-236ENST00000522792 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.05□□□□□ -0.8
CTNNA1-236ENST00000522792 SPCS1Q9Y6A9 102 aa10.05□□□□□ -0.8
CTNNA1-236ENST00000522792 LRCOL1A6NCL2 159 aa10.04□□□□□ -0.8
CTNNA1-236ENST00000522792 RPL18AQ02543 176 aaKnown RBP10.04□□□□□ -0.8
CTNNA1-236ENST00000522792 NCR3O14931 201 aa10.04□□□□□ -0.8
CTNNA1-236ENST00000522792 ALMS1Q8TCU4 4167 aa10.03□□□□□ -0.8
CTNNA1-236ENST00000522792 TRAV13-2A0A0B4J235 113 aa10.03□□□□□ -0.8
CTNNA1-236ENST00000522792 LCE2CQ5TA81 110 aa10.03□□□□□ -0.8
CTNNA1-236ENST00000522792 KMT2AQ03164 3969 aa10.03□□□□□ -0.8
CTNNA1-236ENST00000522792 NDUFC2O95298 119 aa10.02□□□□□ -0.8
CTNNA1-236ENST00000522792 OR13C6PQ8NH95 151 aa10.02□□□□□ -0.8
CTNNA1-236ENST00000522792 TRIAP1O43715 76 aa10.02□□□□□ -0.81
CTNNA1-236ENST00000522792 C14orf177Q52M58 125 aa10.02□□□□□ -0.81
CTNNA1-236ENST00000522792 A0A1B0GV72 72 aa10.01□□□□□ -0.81
CTNNA1-236ENST00000522792 SCGB1C2P0DMR2 95 aa10.01□□□□□ -0.81
CTNNA1-236ENST00000522792 LCE2AQ5TA79 106 aaPredicted RBP10.01□□□□□ -0.81
CTNNA1-236ENST00000522792 TLX1NBP0CAT3 122 aa10□□□□□ -0.81
CTNNA1-236ENST00000522792 CNBPP62633 177 aaKnown RBP9.99□□□□□ -0.81
CTNNA1-236ENST00000522792 GAGE2BQ13066 116 aa9.99□□□□□ -0.81
CTNNA1-236ENST00000522792 C9orf129Q5T035 196 aaKnown RBP9.99□□□□□ -0.81
CTNNA1-236ENST00000522792 C1orf134Q5TEV5 83 aa9.99□□□□□ -0.81
CTNNA1-236ENST00000522792 DNAH6Q9C0G6 4158 aa9.98□□□□□ -0.81
CTNNA1-236ENST00000522792 LOC107984640A0A0U1RRK4 108 aa9.97□□□□□ -0.81
CTNNA1-236ENST00000522792 DNAH2Q9P225 4427 aa9.97□□□□□ -0.81
CTNNA1-236ENST00000522792 A0A087WTM6 91 aa9.97□□□□□ -0.81
CTNNA1-236ENST00000522792 VPREB1P12018 145 aa9.97□□□□□ -0.81
CTNNA1-236ENST00000522792 LYRM7Q5U5X0 104 aa9.97□□□□□ -0.81
CTNNA1-236ENST00000522792 Q8N814 137 aa9.97□□□□□ -0.81
CTNNA1-236ENST00000522792 SMIM11BQ8TCY0 68 aa9.97□□□□□ -0.81
CTNNA1-236ENST00000522792 TCL1BO95988 128 aa9.96□□□□□ -0.81
CTNNA1-236ENST00000522792 H3BMG7 143 aa9.95□□□□□ -0.82
CTNNA1-236ENST00000522792 S100A7L2Q5SY68 101 aa9.95□□□□□ -0.82
CTNNA1-236ENST00000522792 SIGMAR1Q99720 223 aa9.95□□□□□ -0.82
CTNNA1-236ENST00000522792 COX6CP09669 75 aa9.94□□□□□ -0.82
CTNNA1-236ENST00000522792 LINC01620Q4KN68 170 aa9.94□□□□□ -0.82
CTNNA1-236ENST00000522792 SERTAD4-AS1Q5TG53 156 aa9.94□□□□□ -0.82
CTNNA1-236ENST00000522792 FAM168BA1KXE4 195 aa9.94□□□□□ -0.82
CTNNA1-236ENST00000522792 RPL28P46779 137 aaKnown RBP9.94□□□□□ -0.82
CTNNA1-236ENST00000522792 CLEC2BQ92478 149 aa9.94□□□□□ -0.82
CTNNA1-236ENST00000522792 TMEM126AQ9H061 195 aa9.94□□□□□ -0.82
CTNNA1-236ENST00000522792 FUSP35637 526 aaKnown RBP eCLIP9.93□□□□□ -0.82
CTNNA1-236ENST00000522792 A0A096LNI7 61 aa9.92□□□□□ -0.82
CTNNA1-236ENST00000522792 IGKV2-24A0A0C4DH68 120 aa9.92□□□□□ -0.82
CTNNA1-236ENST00000522792 TRBV10-2A0A0K0K1G8 114 aa9.92□□□□□ -0.82
CTNNA1-236ENST00000522792 F8W1H4 67 aa9.92□□□□□ -0.82
CTNNA1-236ENST00000522792 MTURNQ8N3F0 131 aa9.92□□□□□ -0.82
CTNNA1-236ENST00000522792 TRBV20-1A0A075B6N2 111 aa9.91□□□□□ -0.82
CTNNA1-236ENST00000522792 TRBV10-3A0A0K0K1G6 114 aa9.91□□□□□ -0.82
CTNNA1-236ENST00000522792 HYDINQ4G0P3 5121 aa9.91□□□□□ -0.82
CTNNA1-236ENST00000522792 IGLV6-57P01721 117 aa9.9□□□□□ -0.82
CTNNA1-236ENST00000522792 C9orf163Q8N9P6 203 aa9.9□□□□□ -0.82
CTNNA1-236ENST00000522792 M0R378 163 aa9.9□□□□□ -0.82
CTNNA1-236ENST00000522792 NKAPP1Q8N9T2 125 aa9.9□□□□□ -0.82
CTNNA1-236ENST00000522792 C16orf90A8MZG2 172 aa9.89□□□□□ -0.83
CTNNA1-236ENST00000522792 FAM19A5Q7Z5A7 132 aaPredicted RBP9.89□□□□□ -0.83
CTNNA1-236ENST00000522792 CHTF8P0CG12 524 aa9.89□□□□□ -0.83
CTNNA1-236ENST00000522792 TNP2Q05952 138 aa9.89□□□□□ -0.83
CTNNA1-236ENST00000522792 ATXN8Q156A1 80 aa9.89□□□□□ -0.83
CTNNA1-236ENST00000522792 KRTAP7-1Q8IUC3 87 aa9.89□□□□□ -0.83
CTNNA1-236ENST00000522792 J3QR89 54 aa9.88□□□□□ -0.83
CTNNA1-236ENST00000522792 PLA2G2DQ9UNK4 145 aa9.88□□□□□ -0.83
CTNNA1-236ENST00000522792 PRO0461Q9UI25 63 aa9.87□□□□□ -0.83
CTNNA1-236ENST00000522792 DNAH17Q9UFH2 4485 aa9.87□□□□□ -0.83
CTNNA1-236ENST00000522792 RTL8CO15255 209 aa9.87□□□□□ -0.83
CTNNA1-236ENST00000522792 C6orf99Q4VX62 202 aa9.87□□□□□ -0.83
CTNNA1-236ENST00000522792 C7orf33Q8WU49 177 aa9.87□□□□□ -0.83
CTNNA1-236ENST00000522792 FAM218AQ96MZ4 157 aa9.87□□□□□ -0.83
CTNNA1-236ENST00000522792 TRAV23DV6A0A075B6W5 121 aa9.86□□□□□ -0.83
CTNNA1-236ENST00000522792 LST1O00453 97 aa9.86□□□□□ -0.83
CTNNA1-236ENST00000522792 SDIM1Q6ZPB5 146 aa9.85□□□□□ -0.83
CTNNA1-236ENST00000522792 IGLV5-37A0A075B6J1 123 aa9.84□□□□□ -0.83
CTNNA1-236ENST00000522792 ETDBQ3ZM63 59 aa9.84□□□□□ -0.83
CTNNA1-236ENST00000522792 C22orf24Q9Y442 160 aa9.84□□□□□ -0.83
CTNNA1-236ENST00000522792 A0A087WYN8 130 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms