RNA–Protein interactions for RNA: ENST00000521865.5

PABPC1-218, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-218ENST00000521865 C3orf22Q8N5N4 141 aa12.02□□□□□ -0.49
PABPC1-218ENST00000521865 Q8NDZ9 215 aa12.02□□□□□ -0.49
PABPC1-218ENST00000521865 RPS10P5Q9NQ39 176 aa12.02□□□□□ -0.49
PABPC1-218ENST00000521865 C11orf86A6NJI1 115 aa12.01□□□□□ -0.49
PABPC1-218ENST00000521865 CTAG1AP78358 180 aa12.01□□□□□ -0.49
PABPC1-218ENST00000521865 KRTAP9-2Q9BYQ4 174 aa12.01□□□□□ -0.49
PABPC1-218ENST00000521865 FAT4Q6V0I7 4981 aa12□□□□□ -0.49
PABPC1-218ENST00000521865 A0A0U1RRA0 63 aa12□□□□□ -0.49
PABPC1-218ENST00000521865 C18orf32Q8TCD1 76 aa12□□□□□ -0.49
PABPC1-218ENST00000521865 URB1-AS1Q96HZ7 61 aa12□□□□□ -0.49
PABPC1-218ENST00000521865 TRAPPC1Q9Y5R8 145 aa12□□□□□ -0.49
PABPC1-218ENST00000521865 MUC17Q685J3 4493 aa11.99□□□□□ -0.49
PABPC1-218ENST00000521865 RHEBQ15382 184 aa11.98□□□□□ -0.49
PABPC1-218ENST00000521865 COMMD7Q86VX2 200 aa11.98□□□□□ -0.49
PABPC1-218ENST00000521865 PPDPFQ9H3Y8 114 aa11.98□□□□□ -0.49
PABPC1-218ENST00000521865 C4orf48Q5BLP8 95 aa11.97□□□□□ -0.49
PABPC1-218ENST00000521865 LCE2AQ5TA79 106 aaPredicted RBP11.97□□□□□ -0.49
PABPC1-218ENST00000521865 SPAG11AQ6PDA7 123 aa11.97□□□□□ -0.49
PABPC1-218ENST00000521865 ATP6V1G1O75348 118 aa11.96□□□□□ -0.49
PABPC1-218ENST00000521865 CHTOPQ9Y3Y2 248 aaKnown RBP11.96□□□□□ -0.49
PABPC1-218ENST00000521865 SPRR4Q96PI1 79 aa11.95□□□□□ -0.5
PABPC1-218ENST00000521865 ZNF706Q9Y5V0 76 aaPredicted RBP11.95□□□□□ -0.5
PABPC1-218ENST00000521865 IFITM2Q01629 132 aa11.94□□□□□ -0.5
PABPC1-218ENST00000521865 MEIG1Q5JSS6 88 aa11.91□□□□□ -0.5
PABPC1-218ENST00000521865 C10orf91Q5T1B1 145 aa11.91□□□□□ -0.5
PABPC1-218ENST00000521865 BOD1L2Q8IYS8 172 aa11.91□□□□□ -0.5
PABPC1-218ENST00000521865 TMEM223A0PJW6 202 aa11.9□□□□□ -0.5
PABPC1-218ENST00000521865 PRYO14603 147 aa11.9□□□□□ -0.5
PABPC1-218ENST00000521865 SMIM13P0DJ93 91 aa11.9□□□□□ -0.5
PABPC1-218ENST00000521865 NCR3O14931 201 aa11.89□□□□□ -0.51
PABPC1-218ENST00000521865 LINC00337Q8N6G1 96 aa11.89□□□□□ -0.51
PABPC1-218ENST00000521865 DAND5Q8N907 189 aa11.89□□□□□ -0.51
PABPC1-218ENST00000521865 FP248Q71RG6 208 aaPredicted RBP11.88□□□□□ -0.51
PABPC1-218ENST00000521865 Q8NBF4 154 aa11.88□□□□□ -0.51
PABPC1-218ENST00000521865 ETDCA0A1B0GVM5 59 aa11.87□□□□□ -0.51
PABPC1-218ENST00000521865 MIR7-3HGQ8N6C7 128 aa11.87□□□□□ -0.51
PABPC1-218ENST00000521865 SMCR5Q8TEV8 140 aa11.86□□□□□ -0.51
PABPC1-218ENST00000521865 IFI27L1Q96BM0 104 aa11.85□□□□□ -0.51
PABPC1-218ENST00000521865 TRAV12-1A0A0B4J245 112 aa11.84□□□□□ -0.51
PABPC1-218ENST00000521865 HERV-K104P63124 156 aa11.84□□□□□ -0.51
PABPC1-218ENST00000521865 S100A12P80511 92 aa11.84□□□□□ -0.51
PABPC1-218ENST00000521865 KCNQ1DNQ9H478 68 aa11.83□□□□□ -0.52
PABPC1-218ENST00000521865 LINC00587B1AMM8 73 aa11.82□□□□□ -0.52
PABPC1-218ENST00000521865 APOC3P02656 99 aa11.82□□□□□ -0.52
PABPC1-218ENST00000521865 SPRR1AP35321 89 aa11.82□□□□□ -0.52
PABPC1-218ENST00000521865 CHCHD1Q96BP2 118 aaKnown RBP11.82□□□□□ -0.52
PABPC1-218ENST00000521865 TRBV10-3A0A0K0K1G6 114 aa11.81□□□□□ -0.52
PABPC1-218ENST00000521865 SPINK1P00995 79 aa11.81□□□□□ -0.52
PABPC1-218ENST00000521865 NDUFA12Q9UI09 145 aa11.81□□□□□ -0.52
PABPC1-218ENST00000521865 GAGE2AQ6NT46 116 aa11.8□□□□□ -0.52
PABPC1-218ENST00000521865 MAP1LC3CQ9BXW4 147 aa11.8□□□□□ -0.52
PABPC1-218ENST00000521865 MYMXA0A1B0GTQ4 84 aa11.78□□□□□ -0.52
PABPC1-218ENST00000521865 KRTAP13-3Q3SY46 172 aa11.78□□□□□ -0.52
PABPC1-218ENST00000521865 IGLV9-49A0A0B4J1Y8 123 aa11.77□□□□□ -0.53
PABPC1-218ENST00000521865 KRTAP4-16G5E9R7 235 aaPredicted RBP11.77□□□□□ -0.53
PABPC1-218ENST00000521865 H0Y8G0 127 aa11.77□□□□□ -0.53
PABPC1-218ENST00000521865 SNAPINO95295 136 aa11.77□□□□□ -0.53
PABPC1-218ENST00000521865 NDUFA5Q16718 116 aa11.77□□□□□ -0.53
PABPC1-218ENST00000521865 MOBPQ13875 183 aa11.76□□□□□ -0.53
PABPC1-218ENST00000521865 LINC00483Q53H64 154 aa11.76□□□□□ -0.53
PABPC1-218ENST00000521865 HSBP1O75506 76 aa11.75□□□□□ -0.53
PABPC1-218ENST00000521865 SVBPQ8N300 66 aa11.75□□□□□ -0.53
PABPC1-218ENST00000521865 B5MCH6 92 aa11.74□□□□□ -0.53
PABPC1-218ENST00000521865 DDTP30046 118 aa11.74□□□□□ -0.53
PABPC1-218ENST00000521865 ASB16-AS1Q495Z4 193 aa11.74□□□□□ -0.53
PABPC1-218ENST00000521865 FAM19A2Q8N3H0 131 aa11.74□□□□□ -0.53
PABPC1-218ENST00000521865 ERC2-IT1O76042 136 aa11.72□□□□□ -0.53
PABPC1-218ENST00000521865 KRTAP9-6A0A140TA67 174 aa11.71□□□□□ -0.53
PABPC1-218ENST00000521865 SEC61BP60468 96 aaKnown RBP11.71□□□□□ -0.53
PABPC1-218ENST00000521865 MIEN1Q9BRT3 115 aa11.71□□□□□ -0.53
PABPC1-218ENST00000521865 LINC01547P58512 204 aaPredicted RBP11.7□□□□□ -0.54
PABPC1-218ENST00000521865 SSBP3-AS1Q7Z2R9 100 aa11.7□□□□□ -0.54
PABPC1-218ENST00000521865 TSPEAR-AS2P59090 65 aa11.69□□□□□ -0.54
PABPC1-218ENST00000521865 TRBV10-2A0A0K0K1G8 114 aa11.68□□□□□ -0.54
PABPC1-218ENST00000521865 LEPROTO15243 131 aa11.68□□□□□ -0.54
PABPC1-218ENST00000521865 S100A7L2Q5SY68 101 aa11.68□□□□□ -0.54
PABPC1-218ENST00000521865 RPS29P62273 56 aaKnown RBP11.67□□□□□ -0.54
PABPC1-218ENST00000521865 Q6ZRX8 168 aa11.67□□□□□ -0.54
PABPC1-218ENST00000521865 Q8N377 158 aa11.67□□□□□ -0.54
PABPC1-218ENST00000521865 Q9BRP9 147 aa11.67□□□□□ -0.54
PABPC1-218ENST00000521865 SPANXB1Q9NS25 103 aaPredicted RBP11.67□□□□□ -0.54
PABPC1-218ENST00000521865 SLC25A20O43772 301 aa11.66□□□□□ -0.54
PABPC1-218ENST00000521865 LEPROTL1O95214 131 aa11.66□□□□□ -0.54
PABPC1-218ENST00000521865 YPEL4Q96NS1 127 aa11.66□□□□□ -0.54
PABPC1-218ENST00000521865 LOC107984156A0A0G2JMH3 177 aa11.65□□□□□ -0.54
PABPC1-218ENST00000521865 J3QQQ9 107 aa11.65□□□□□ -0.54
PABPC1-218ENST00000521865 HERVK_113P61574 105 aa11.65□□□□□ -0.54
PABPC1-218ENST00000521865 C9orf153Q5TBE3 101 aa11.65□□□□□ -0.54
PABPC1-218ENST00000521865 ARL17AQ8IVW1 177 aa11.65□□□□□ -0.54
PABPC1-218ENST00000521865 LGALS3P17931 250 aaKnown RBP11.64□□□□□ -0.55
PABPC1-218ENST00000521865 PLNP26678 52 aa11.64□□□□□ -0.55
PABPC1-218ENST00000521865 JOSD1Q15040 202 aaPredicted RBP11.63□□□□□ -0.55
PABPC1-218ENST00000521865 KRTAP4-1Q9BYQ7 146 aa11.63□□□□□ -0.55
PABPC1-218ENST00000521865 TRAV23DV6A0A075B6W5 121 aa11.62□□□□□ -0.55
PABPC1-218ENST00000521865 DPM2O94777 84 aa11.61□□□□□ -0.55
PABPC1-218ENST00000521865 NMUP48645 174 aa11.61□□□□□ -0.55
PABPC1-218ENST00000521865 NDUFC2O95298 119 aa11.6□□□□□ -0.55
PABPC1-218ENST00000521865 IGLV6-57P01721 117 aa11.6□□□□□ -0.55
PABPC1-218ENST00000521865 NPC2P61916 151 aa11.6□□□□□ -0.55
PABPC1-218ENST00000521865 PMCHL2Q9BQD1 86 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms