RNA–Protein interactions for RNA: ENST00000521798.1

SPIDR-215, Transcript of scaffold protein involved in DNA repair, human

TSL 3

Gene SPIDR, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-215	ENST00000521798	FGF6	P10767	208 aa		4.31	□□□□□ -1.72
SPIDR-215	ENST00000521798	C1orf195	Q5TG92	126 aa		4.31	□□□□□ -1.72
SPIDR-215	ENST00000521798	MIR7-3HG	Q8N6C7	128 aa		4.31	□□□□□ -1.72
SPIDR-215	ENST00000521798	C20orf78	Q9BR46	151 aa		4.31	□□□□□ -1.72
SPIDR-215	ENST00000521798	IGLV10-54	A0A075B6I4	117 aa		4.3	□□□□□ -1.72
SPIDR-215	ENST00000521798	ZNF25	P17030	456 aa	Predicted RBP	4.3	□□□□□ -1.72
SPIDR-215	ENST00000521798	KRTAP10-1	P60331	282 aa		4.3	□□□□□ -1.72
SPIDR-215	ENST00000521798	RHEB	Q15382	184 aa		4.3	□□□□□ -1.72
SPIDR-215	ENST00000521798	AMMECR1L	Q6DCA0	310 aa		4.3	□□□□□ -1.72
SPIDR-215	ENST00000521798	TMEM136	Q6ZRR5	245 aa		4.3	□□□□□ -1.72
SPIDR-215	ENST00000521798	PRELID3A	Q96N28	172 aa		4.3	□□□□□ -1.72
SPIDR-215	ENST00000521798	SMIM2	Q9BVW6	85 aa		4.3	□□□□□ -1.72
SPIDR-215	ENST00000521798	TRAV9-1	A0A075B6T8	112 aa		4.29	□□□□□ -1.72
SPIDR-215	ENST00000521798	FCER1G	P30273	86 aa		4.29	□□□□□ -1.72
SPIDR-215	ENST00000521798	CDC42SE2	Q9NRR3	84 aa		4.29	□□□□□ -1.72
SPIDR-215	ENST00000521798	UBE2D4	Q9Y2X8	147 aa		4.29	□□□□□ -1.72
SPIDR-215	ENST00000521798	IGKV3OR2-268	A0A0C4DH90	116 aa		4.28	□□□□□ -1.72
SPIDR-215	ENST00000521798	APOC3	P02656	99 aa		4.28	□□□□□ -1.72
SPIDR-215	ENST00000521798	OR5A1	Q8NGJ0	315 aa		4.28	□□□□□ -1.72
SPIDR-215	ENST00000521798	LAMTOR2	Q9Y2Q5	125 aa		4.28	□□□□□ -1.72
SPIDR-215	ENST00000521798	MYCBP2	O75592	4640 aa		4.27	□□□□□ -1.73
SPIDR-215	ENST00000521798	S100P	P25815	95 aa		4.27	□□□□□ -1.73
SPIDR-215	ENST00000521798	S100A2	P29034	98 aa		4.27	□□□□□ -1.73
SPIDR-215	ENST00000521798	RPL39	P62891	51 aa	Known RBP	4.27	□□□□□ -1.73
SPIDR-215	ENST00000521798		Q6ZUT4	128 aa		4.27	□□□□□ -1.73
SPIDR-215	ENST00000521798	SVBP	Q8N300	66 aa		4.27	□□□□□ -1.73
SPIDR-215	ENST00000521798	ZNF664	Q8N3J9	261 aa		4.27	□□□□□ -1.73
SPIDR-215	ENST00000521798	GNB1L	Q9BYB4	327 aa		4.27	□□□□□ -1.73
SPIDR-215	ENST00000521798	SRRM2	Q9UQ35	2752 aa	Known RBP	4.26	□□□□□ -1.73
SPIDR-215	ENST00000521798	LINC00959	A0A1B0GUT2	108 aa		4.26	□□□□□ -1.73
SPIDR-215	ENST00000521798	DDT	P30046	118 aa		4.26	□□□□□ -1.73
SPIDR-215	ENST00000521798	NDUFA5	Q16718	116 aa		4.26	□□□□□ -1.73
SPIDR-215	ENST00000521798		Q8N8P6	123 aa		4.26	□□□□□ -1.73
SPIDR-215	ENST00000521798		Q8N9L7	120 aa		4.26	□□□□□ -1.73
SPIDR-215	ENST00000521798	TIMM21	Q9BVV7	248 aa		4.26	□□□□□ -1.73
SPIDR-215	ENST00000521798	TGIF2-C20orf24	A0A0A6YYL0	155 aa		4.25	□□□□□ -1.73
SPIDR-215	ENST00000521798		A8MU10	97 aa		4.25	□□□□□ -1.73
SPIDR-215	ENST00000521798	CCL25	O15444	150 aa		4.25	□□□□□ -1.73
SPIDR-215	ENST00000521798	IFI27	P40305	119 aa	Predicted RBP	4.25	□□□□□ -1.73
SPIDR-215	ENST00000521798	XCL1	P47992	114 aa		4.25	□□□□□ -1.73
SPIDR-215	ENST00000521798	LINC00483	Q53H64	154 aa		4.25	□□□□□ -1.73
SPIDR-215	ENST00000521798		Q6ZSA8	131 aa		4.25	□□□□□ -1.73
SPIDR-215	ENST00000521798	SPANXA1	Q9NS26	97 aa		4.25	□□□□□ -1.73
SPIDR-215	ENST00000521798	PKHD1L1	Q86WI1	4243 aa		4.24	□□□□□ -1.73
SPIDR-215	ENST00000521798	TRAV13-1	A0A0B4J241	112 aa		4.24	□□□□□ -1.73
SPIDR-215	ENST00000521798	MT-ND6	P03923	174 aa		4.24	□□□□□ -1.73
SPIDR-215	ENST00000521798	RAB5B	P61020	215 aa		4.24	□□□□□ -1.73
SPIDR-215	ENST00000521798	HAMP	P81172	84 aa		4.24	□□□□□ -1.73
SPIDR-215	ENST00000521798	MRPS36	P82909	103 aa	Known RBP	4.24	□□□□□ -1.73
SPIDR-215	ENST00000521798	SS18	Q15532	418 aa		4.24	□□□□□ -1.73
SPIDR-215	ENST00000521798	NXT2	Q9NPJ8	142 aa	Known RBP	4.24	□□□□□ -1.73
SPIDR-215	ENST00000521798	FAT3	Q8TDW7	4589 aa		4.23	□□□□□ -1.73
SPIDR-215	ENST00000521798	GVQW2	A0A096LPI5	108 aa	Predicted RBP	4.23	□□□□□ -1.73
SPIDR-215	ENST00000521798	C1orf196	B1AJZ1	125 aa		4.23	□□□□□ -1.73
SPIDR-215	ENST00000521798		K7EMI3	77 aa		4.23	□□□□□ -1.73
SPIDR-215	ENST00000521798		K7ERS5	55 aa		4.23	□□□□□ -1.73
SPIDR-215	ENST00000521798	KRTAP10-12	P60413	245 aa		4.23	□□□□□ -1.73
SPIDR-215	ENST00000521798	CNBP	P62633	177 aa	Known RBP	4.23	□□□□□ -1.73
SPIDR-215	ENST00000521798	FABP9	Q0Z7S8	132 aa		4.23	□□□□□ -1.73
SPIDR-215	ENST00000521798	JOSD1	Q15040	202 aa	Predicted RBP	4.23	□□□□□ -1.73
SPIDR-215	ENST00000521798	C9orf163	Q8N9P6	203 aa		4.23	□□□□□ -1.73
SPIDR-215	ENST00000521798	CYSLTR1	Q9Y271	337 aa		4.23	□□□□□ -1.73
SPIDR-215	ENST00000521798	LINC01546	A6NGU7	62 aa		4.22	□□□□□ -1.73
SPIDR-215	ENST00000521798	IGIP	A6NJ69	53 aa		4.22	□□□□□ -1.73
SPIDR-215	ENST00000521798	ST20-AS1	Q8NBB2	130 aa		4.22	□□□□□ -1.73
SPIDR-215	ENST00000521798	TRAPPC1	Q9Y5R8	145 aa		4.22	□□□□□ -1.73
SPIDR-215	ENST00000521798	HERC1	Q15751	4861 aa		4.22	□□□□□ -1.73
SPIDR-215	ENST00000521798	LRP1	Q07954	4544 aa	Known RBP	4.21	□□□□□ -1.74
SPIDR-215	ENST00000521798	IGHV1-58	A0A0C4DH39	117 aa		4.21	□□□□□ -1.74
SPIDR-215	ENST00000521798	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	4.21	□□□□□ -1.74
SPIDR-215	ENST00000521798	COX7A2L	O14548	114 aa		4.21	□□□□□ -1.74
SPIDR-215	ENST00000521798	SDIM1	Q6ZPB5	146 aa		4.21	□□□□□ -1.74
SPIDR-215	ENST00000521798	SCX	Q7RTU7	201 aa		4.21	□□□□□ -1.74
SPIDR-215	ENST00000521798	C5orf38	Q86SI9	138 aa		4.21	□□□□□ -1.74
SPIDR-215	ENST00000521798	TOMM6	Q96B49	74 aa		4.21	□□□□□ -1.74
SPIDR-215	ENST00000521798	LINC00526	Q96FQ7	95 aa		4.21	□□□□□ -1.74
SPIDR-215	ENST00000521798	TMEM141	Q96I45	108 aa		4.21	□□□□□ -1.74
SPIDR-215	ENST00000521798	AMELX	Q99217	191 aa		4.21	□□□□□ -1.74
SPIDR-215	ENST00000521798	SMR3B	P02814	79 aa	Predicted RBP	4.2	□□□□□ -1.74
SPIDR-215	ENST00000521798	UBE2D1	P51668	147 aa		4.2	□□□□□ -1.74
SPIDR-215	ENST00000521798	LINC00313	P59037	77 aa		4.2	□□□□□ -1.74
SPIDR-215	ENST00000521798	HERVK_113	P63121	156 aa		4.2	□□□□□ -1.74
SPIDR-215	ENST00000521798	BATF	Q16520	125 aa		4.2	□□□□□ -1.74
SPIDR-215	ENST00000521798	C18orf32	Q8TCD1	76 aa		4.2	□□□□□ -1.74
SPIDR-215	ENST00000521798	SMCO4	Q9NRQ5	59 aa		4.2	□□□□□ -1.74
SPIDR-215	ENST00000521798	IGHV3-64	A0A075B6Q5	118 aa		4.19	□□□□□ -1.74
SPIDR-215	ENST00000521798	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	4.19	□□□□□ -1.74
SPIDR-215	ENST00000521798	G0S2	P27469	103 aa		4.19	□□□□□ -1.74
SPIDR-215	ENST00000521798	COX6A2	Q02221	97 aa		4.19	□□□□□ -1.74
SPIDR-215	ENST00000521798	CIRBP	Q14011	172 aa	Known RBP	4.19	□□□□□ -1.74
SPIDR-215	ENST00000521798	SPAG11B	Q08648	103 aa		4.18	□□□□□ -1.74
SPIDR-215	ENST00000521798		Q5VSD8	79 aa		4.18	□□□□□ -1.74
SPIDR-215	ENST00000521798	SLC25A34	Q6PIV7	304 aa		4.18	□□□□□ -1.74
SPIDR-215	ENST00000521798	CARD19	Q96LW7	228 aa		4.18	□□□□□ -1.74
SPIDR-215	ENST00000521798	SCGB3A1	Q96QR1	104 aa		4.18	□□□□□ -1.74
SPIDR-215	ENST00000521798	C2orf88	Q9BSF0	95 aa		4.18	□□□□□ -1.74
SPIDR-215	ENST00000521798	FLG2	Q5D862	2391 aa	Predicted RBP	4.18	□□□□□ -1.74
SPIDR-215	ENST00000521798	LINC01549	A6NIU2	74 aa		4.17	□□□□□ -1.74
SPIDR-215	ENST00000521798	APOM	O95445	188 aa		4.17	□□□□□ -1.74
SPIDR-215	ENST00000521798	PMCHL1	Q16048	86 aa		4.17	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms