RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 RPL37AP8A6NKH3 93 aa12.53□□□□□ -0.4
TRIM35-203ENST00000521253 H0Y9J4 135 aa12.52□□□□□ -0.41
TRIM35-203ENST00000521253 DPM2O94777 84 aa12.52□□□□□ -0.41
TRIM35-203ENST00000521253 LINC00158P58513 81 aa12.52□□□□□ -0.41
TRIM35-203ENST00000521253 MAP1LC3CQ9BXW4 147 aa12.52□□□□□ -0.41
TRIM35-203ENST00000521253 A0A0U1RRA0 63 aa12.51□□□□□ -0.41
TRIM35-203ENST00000521253 KRTAP10-8P60410 259 aa12.51□□□□□ -0.41
TRIM35-203ENST00000521253 VPREB1P12018 145 aa12.5□□□□□ -0.41
TRIM35-203ENST00000521253 NDUFA12Q9UI09 145 aa12.5□□□□□ -0.41
TRIM35-203ENST00000521253 IGKCP01834 107 aa12.49□□□□□ -0.41
TRIM35-203ENST00000521253 TSPEAR-AS2P59090 65 aa12.49□□□□□ -0.41
TRIM35-203ENST00000521253 Q8NDZ9 215 aa12.49□□□□□ -0.41
TRIM35-203ENST00000521253 LEPROTO15243 131 aa12.48□□□□□ -0.41
TRIM35-203ENST00000521253 ZNF861PO60384 105 aa12.48□□□□□ -0.41
TRIM35-203ENST00000521253 SMIM13P0DJ93 91 aa12.48□□□□□ -0.41
TRIM35-203ENST00000521253 HERV-K104P63124 156 aa12.48□□□□□ -0.41
TRIM35-203ENST00000521253 RPL24P83731 157 aaKnown RBP12.48□□□□□ -0.41
TRIM35-203ENST00000521253 MYMXA0A1B0GTQ4 84 aa12.47□□□□□ -0.41
TRIM35-203ENST00000521253 BCE1O60756 84 aa12.47□□□□□ -0.41
TRIM35-203ENST00000521253 MEIG1Q5JSS6 88 aa12.47□□□□□ -0.41
TRIM35-203ENST00000521253 PLEKHB2Q96CS7 222 aa12.47□□□□□ -0.41
TRIM35-203ENST00000521253 HERVK_113P61574 105 aa12.46□□□□□ -0.41
TRIM35-203ENST00000521253 IGKV2-28A0A075B6P5 120 aa12.45□□□□□ -0.42
TRIM35-203ENST00000521253 SYS1-DBNDD2H3BUS1 97 aa12.45□□□□□ -0.42
TRIM35-203ENST00000521253 IGKV2D-28P01615 120 aa12.45□□□□□ -0.42
TRIM35-203ENST00000521253 J3QQQ9 107 aa12.44□□□□□ -0.42
TRIM35-203ENST00000521253 COA6Q5JTJ3 125 aaKnown RBP12.44□□□□□ -0.42
TRIM35-203ENST00000521253 LINC00587B1AMM8 73 aa12.43□□□□□ -0.42
TRIM35-203ENST00000521253 KRTAP1-4P0C5Y4 121 aa12.43□□□□□ -0.42
TRIM35-203ENST00000521253 MIR7-3HGQ8N6C7 128 aa12.43□□□□□ -0.42
TRIM35-203ENST00000521253 IGLV1-50A0A075B6I6 118 aa12.42□□□□□ -0.42
TRIM35-203ENST00000521253 RPL28P46779 137 aaKnown RBP12.42□□□□□ -0.42
TRIM35-203ENST00000521253 PRR26Q8N8Z3 221 aa12.41□□□□□ -0.42
TRIM35-203ENST00000521253 LGALS3P17931 250 aaKnown RBP12.4□□□□□ -0.42
TRIM35-203ENST00000521253 LINC01545Q5VT33 79 aa12.4□□□□□ -0.42
TRIM35-203ENST00000521253 NMUP48645 174 aa12.39□□□□□ -0.43
TRIM35-203ENST00000521253 PET117Q6UWS5 81 aa12.39□□□□□ -0.43
TRIM35-203ENST00000521253 BOD1L2Q8IYS8 172 aa12.39□□□□□ -0.43
TRIM35-203ENST00000521253 TMEM238C9JI98 176 aa12.38□□□□□ -0.43
TRIM35-203ENST00000521253 KRTAP13-1Q8IUC0 172 aa12.38□□□□□ -0.43
TRIM35-203ENST00000521253 E9PLD3 99 aa12.37□□□□□ -0.43
TRIM35-203ENST00000521253 C3orf79P0CE67 100 aa12.37□□□□□ -0.43
TRIM35-203ENST00000521253 UBE2AP49459 152 aa12.37□□□□□ -0.43
TRIM35-203ENST00000521253 TMEM126AQ9H061 195 aa12.37□□□□□ -0.43
TRIM35-203ENST00000521253 M0R378 163 aa12.36□□□□□ -0.43
TRIM35-203ENST00000521253 DAND5Q8N907 189 aa12.36□□□□□ -0.43
TRIM35-203ENST00000521253 NCR3O14931 201 aa12.33□□□□□ -0.44
TRIM35-203ENST00000521253 KRTDAPP60985 99 aa12.33□□□□□ -0.44
TRIM35-203ENST00000521253 FAM19A1Q7Z5A9 133 aa12.33□□□□□ -0.44
TRIM35-203ENST00000521253 PRLHP81277 87 aa12.32□□□□□ -0.44
TRIM35-203ENST00000521253 IGKV2D-26A0A0A0MRZ7 120 aa12.31□□□□□ -0.44
TRIM35-203ENST00000521253 LOC107984156A0A0G2JMH3 177 aa12.31□□□□□ -0.44
TRIM35-203ENST00000521253 A0A0J9YXY3 114 aa12.31□□□□□ -0.44
TRIM35-203ENST00000521253 ARL17AQ8IVW1 177 aa12.31□□□□□ -0.44
TRIM35-203ENST00000521253 RPL13AP40429 203 aaKnown RBP12.29□□□□□ -0.44
TRIM35-203ENST00000521253 ADAMTSL4-AS1Q5T5F5 129 aa12.27□□□□□ -0.45
TRIM35-203ENST00000521253 MIEN1Q9BRT3 115 aa12.27□□□□□ -0.45
TRIM35-203ENST00000521253 PRYO14603 147 aa12.26□□□□□ -0.45
TRIM35-203ENST00000521253 A0A087X002 238 aa12.25□□□□□ -0.45
TRIM35-203ENST00000521253 TRBV10-3A0A0K0K1G6 114 aa12.25□□□□□ -0.45
TRIM35-203ENST00000521253 C20orf202A1L168 122 aa12.25□□□□□ -0.45
TRIM35-203ENST00000521253 KCNQ1DNQ9H478 68 aa12.25□□□□□ -0.45
TRIM35-203ENST00000521253 ANAPC11Q9NYG5 84 aa12.25□□□□□ -0.45
TRIM35-203ENST00000521253 SOSTDC1Q6X4U4 206 aa12.24□□□□□ -0.45
TRIM35-203ENST00000521253 TRBV10-2A0A0K0K1G8 114 aa12.23□□□□□ -0.45
TRIM35-203ENST00000521253 EIF4EBP3O60516 100 aaPredicted RBP12.23□□□□□ -0.45
TRIM35-203ENST00000521253 NPC2P61916 151 aa12.23□□□□□ -0.45
TRIM35-203ENST00000521253 TTTY13Q9BZ97 58 aa12.23□□□□□ -0.45
TRIM35-203ENST00000521253 UBR4Q5T4S7 5183 aa12.23□□□□□ -0.45
TRIM35-203ENST00000521253 ZNF815PA8K554 130 aa12.22□□□□□ -0.45
TRIM35-203ENST00000521253 NDUFC2O95298 119 aa12.22□□□□□ -0.45
TRIM35-203ENST00000521253 CRYGAP11844 174 aa12.22□□□□□ -0.45
TRIM35-203ENST00000521253 SPRR1AP35321 89 aa12.22□□□□□ -0.45
TRIM35-203ENST00000521253 LITAFQ99732 161 aa12.22□□□□□ -0.45
TRIM35-203ENST00000521253 SPANXB1Q9NS25 103 aaPredicted RBP12.22□□□□□ -0.45
TRIM35-203ENST00000521253 LRP2P98164 4655 aa12.21□□□□□ -0.45
TRIM35-203ENST00000521253 HIST3H2BBQ8N257 126 aa12.21□□□□□ -0.45
TRIM35-203ENST00000521253 HIGD2AQ9BW72 106 aa12.21□□□□□ -0.45
TRIM35-203ENST00000521253 DDTP30046 118 aa12.2□□□□□ -0.46
TRIM35-203ENST00000521253 ATOH7Q8N100 152 aa12.2□□□□□ -0.46
TRIM35-203ENST00000521253 LINC00337Q8N6G1 96 aa12.2□□□□□ -0.46
TRIM35-203ENST00000521253 KRTAP4-16G5E9R7 235 aaPredicted RBP12.19□□□□□ -0.46
TRIM35-203ENST00000521253 TIMM17BO60830 172 aa12.19□□□□□ -0.46
TRIM35-203ENST00000521253 ANKRD39Q53RE8 183 aa12.19□□□□□ -0.46
TRIM35-203ENST00000521253 FAM229BQ4G0N7 80 aa12.18□□□□□ -0.46
TRIM35-203ENST00000521253 HIST1H2BLQ99880 126 aa12.18□□□□□ -0.46
TRIM35-203ENST00000521253 ETDCA0A1B0GVM5 59 aa12.17□□□□□ -0.46
TRIM35-203ENST00000521253 S100A2P29034 98 aa12.17□□□□□ -0.46
TRIM35-203ENST00000521253 S100A12P80511 92 aa12.17□□□□□ -0.46
TRIM35-203ENST00000521253 LINC00308Q8TCZ7 52 aa12.17□□□□□ -0.46
TRIM35-203ENST00000521253 KRTAP13-2Q52LG2 175 aa12.16□□□□□ -0.46
TRIM35-203ENST00000521253 TYMSOSQ8TAI1 123 aa12.16□□□□□ -0.46
TRIM35-203ENST00000521253 IGLV6-57P01721 117 aa12.15□□□□□ -0.46
TRIM35-203ENST00000521253 AKR1D1P51857 326 aa12.15□□□□□ -0.46
TRIM35-203ENST00000521253 S100A7L2Q5SY68 101 aa12.15□□□□□ -0.46
TRIM35-203ENST00000521253 S100A6P06703 90 aa12.14□□□□□ -0.47
TRIM35-203ENST00000521253 SPANXCQ9NY87 97 aa12.13□□□□□ -0.47
TRIM35-203ENST00000521253 B5MCH6 92 aa12.12□□□□□ -0.47
TRIM35-203ENST00000521253 SCGB1D4Q6XE38 83 aa12.12□□□□□ -0.47
TRIM35-203ENST00000521253 SPRR4Q96PI1 79 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms