RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 SPRR4Q96PI1 79 aa6.52□□□□□ -1.37
MRPS28-206ENST00000520946 ATP6V1G1O75348 118 aa6.51□□□□□ -1.37
MRPS28-206ENST00000520946 SMCO4Q9NRQ5 59 aa6.51□□□□□ -1.37
MRPS28-206ENST00000520946 FAM19A2Q8N3H0 131 aa6.5□□□□□ -1.37
MRPS28-206ENST00000520946 LINC00158P58513 81 aa6.49□□□□□ -1.37
MRPS28-206ENST00000520946 S100A12P80511 92 aa6.49□□□□□ -1.37
MRPS28-206ENST00000520946 FA2HQ7L5A8 372 aa6.49□□□□□ -1.37
MRPS28-206ENST00000520946 SFTA2Q6UW10 78 aa6.48□□□□□ -1.37
MRPS28-206ENST00000520946 ETDCA0A1B0GVM5 59 aa6.47□□□□□ -1.37
MRPS28-206ENST00000520946 IGLV9-49A0A0B4J1Y8 123 aa6.46□□□□□ -1.38
MRPS28-206ENST00000520946 A0A0U1RRA0 63 aa6.46□□□□□ -1.38
MRPS28-206ENST00000520946 TMEM170BQ5T4T1 132 aa6.46□□□□□ -1.38
MRPS28-206ENST00000520946 GAGE2AQ6NT46 116 aa6.46□□□□□ -1.38
MRPS28-206ENST00000520946 SMCR5Q8TEV8 140 aa6.46□□□□□ -1.38
MRPS28-206ENST00000520946 IGLV5-39A0A0G2JS06 123 aa6.45□□□□□ -1.38
MRPS28-206ENST00000520946 PRYO14603 147 aa6.45□□□□□ -1.38
MRPS28-206ENST00000520946 SLC25A20O43772 301 aa6.45□□□□□ -1.38
MRPS28-206ENST00000520946 IGLC3P0DOY3 106 aa6.45□□□□□ -1.38
MRPS28-206ENST00000520946 KRTAP4-1Q9BYQ7 146 aa6.45□□□□□ -1.38
MRPS28-206ENST00000520946 MUC17Q685J3 4493 aa6.44□□□□□ -1.38
MRPS28-206ENST00000520946 ZNF22P17026 224 aaPredicted RBP6.44□□□□□ -1.38
MRPS28-206ENST00000520946 S100PP25815 95 aa6.44□□□□□ -1.38
MRPS28-206ENST00000520946 MOBPQ13875 183 aa6.44□□□□□ -1.38
MRPS28-206ENST00000520946 BOD1L2Q8IYS8 172 aa6.43□□□□□ -1.38
MRPS28-206ENST00000520946 FSIP2Q5CZC0 6907 aa6.42□□□□□ -1.38
MRPS28-206ENST00000520946 NCR3O14931 201 aa6.42□□□□□ -1.38
MRPS28-206ENST00000520946 MEIG1Q5JSS6 88 aa6.42□□□□□ -1.38
MRPS28-206ENST00000520946 SSBP3-AS1Q7Z2R9 100 aa6.42□□□□□ -1.38
MRPS28-206ENST00000520946 Q8NDZ9 215 aa6.42□□□□□ -1.38
MRPS28-206ENST00000520946 TRAV9-1A0A075B6T8 112 aa6.41□□□□□ -1.38
MRPS28-206ENST00000520946 LINC01546A6NGU7 62 aa6.41□□□□□ -1.38
MRPS28-206ENST00000520946 CFC1BP0CG36 223 aa6.41□□□□□ -1.38
MRPS28-206ENST00000520946 RPS29P62273 56 aaKnown RBP6.41□□□□□ -1.38
MRPS28-206ENST00000520946 FABP9Q0Z7S8 132 aa6.41□□□□□ -1.38
MRPS28-206ENST00000520946 C9orf153Q5TBE3 101 aa6.4□□□□□ -1.38
MRPS28-206ENST00000520946 BAGE3Q86Y29 109 aa6.4□□□□□ -1.38
MRPS28-206ENST00000520946 Q8N377 158 aa6.4□□□□□ -1.38
MRPS28-206ENST00000520946 COX19Q49B96 90 aa6.39□□□□□ -1.39
MRPS28-206ENST00000520946 XP32Q5T750 250 aa6.39□□□□□ -1.39
MRPS28-206ENST00000520946 KCNQ1DNQ9H478 68 aa6.39□□□□□ -1.39
MRPS28-206ENST00000520946 SMIM13P0DJ93 91 aa6.38□□□□□ -1.39
MRPS28-206ENST00000520946 LINC00483Q53H64 154 aa6.38□□□□□ -1.39
MRPS28-206ENST00000520946 TRBV10-3A0A0K0K1G6 114 aa6.37□□□□□ -1.39
MRPS28-206ENST00000520946 C11orf86A6NJI1 115 aa6.37□□□□□ -1.39
MRPS28-206ENST00000520946 LINC00587B1AMM8 73 aa6.37□□□□□ -1.39
MRPS28-206ENST00000520946 HBDP02042 147 aa6.37□□□□□ -1.39
MRPS28-206ENST00000520946 MAP1LC3CQ9BXW4 147 aa6.37□□□□□ -1.39
MRPS28-206ENST00000520946 IGLV8-61A0A075B6I0 122 aa6.36□□□□□ -1.39
MRPS28-206ENST00000520946 M0R2T5 61 aa6.36□□□□□ -1.39
MRPS28-206ENST00000520946 LINC00614P0C842 121 aa6.36□□□□□ -1.39
MRPS28-206ENST00000520946 SPRR1AP35321 89 aa6.36□□□□□ -1.39
MRPS28-206ENST00000520946 MIR7-3HGQ8N6C7 128 aa6.36□□□□□ -1.39
MRPS28-206ENST00000520946 SEC11CQ9BY50 192 aa6.36□□□□□ -1.39
MRPS28-206ENST00000520946 CHTOPQ9Y3Y2 248 aaKnown RBP6.36□□□□□ -1.39
MRPS28-206ENST00000520946 PMCHL1Q16048 86 aa6.35□□□□□ -1.39
MRPS28-206ENST00000520946 B5MCH6 92 aa6.34□□□□□ -1.39
MRPS28-206ENST00000520946 HERV-K104P63124 156 aa6.34□□□□□ -1.39
MRPS28-206ENST00000520946 JOSD1Q15040 202 aaPredicted RBP6.34□□□□□ -1.39
MRPS28-206ENST00000520946 PCOTHQ58A44 107 aa6.34□□□□□ -1.39
MRPS28-206ENST00000520946 DDTP30046 118 aa6.33□□□□□ -1.4
MRPS28-206ENST00000520946 S100A7L2Q5SY68 101 aa6.33□□□□□ -1.4
MRPS28-206ENST00000520946 TMEM223A0PJW6 202 aa6.32□□□□□ -1.4
MRPS28-206ENST00000520946 KRTAP4-16G5E9R7 235 aaPredicted RBP6.32□□□□□ -1.4
MRPS28-206ENST00000520946 ERC2-IT1O76042 136 aa6.32□□□□□ -1.4
MRPS28-206ENST00000520946 MT1HP80294 61 aa6.32□□□□□ -1.4
MRPS28-206ENST00000520946 MIEN1Q9BRT3 115 aa6.32□□□□□ -1.4
MRPS28-206ENST00000520946 LIMD2Q9BT23 127 aa6.32□□□□□ -1.4
MRPS28-206ENST00000520946 MYMXA0A1B0GTQ4 84 aa6.31□□□□□ -1.4
MRPS28-206ENST00000520946 C9orf92A6NGG3 77 aa6.31□□□□□ -1.4
MRPS28-206ENST00000520946 LCE2CQ5TA81 110 aa6.31□□□□□ -1.4
MRPS28-206ENST00000520946 TRAPPC1Q9Y5R8 145 aa6.31□□□□□ -1.4
MRPS28-206ENST00000520946 A0A096LNJ9 63 aa6.3□□□□□ -1.4
MRPS28-206ENST00000520946 HINT1P49773 126 aaPredicted RBP6.3□□□□□ -1.4
MRPS28-206ENST00000520946 HRCT1Q6UXD1 115 aa6.3□□□□□ -1.4
MRPS28-206ENST00000520946 COX6B2Q6YFQ2 88 aa6.3□□□□□ -1.4
MRPS28-206ENST00000520946 Q6ZRX8 168 aa6.3□□□□□ -1.4
MRPS28-206ENST00000520946 COMMD7Q86VX2 200 aa6.29□□□□□ -1.4
MRPS28-206ENST00000520946 C18orf32Q8TCD1 76 aa6.29□□□□□ -1.4
MRPS28-206ENST00000520946 TMEM218A2RU14 115 aa6.28□□□□□ -1.4
MRPS28-206ENST00000520946 SLC25A34Q6PIV7 304 aa6.28□□□□□ -1.4
MRPS28-206ENST00000520946 UQCC3Q6UW78 93 aa6.28□□□□□ -1.4
MRPS28-206ENST00000520946 Q9BRP9 147 aa6.28□□□□□ -1.4
MRPS28-206ENST00000520946 TRBV10-2A0A0K0K1G8 114 aa6.27□□□□□ -1.41
MRPS28-206ENST00000520946 IFI27L1Q96BM0 104 aa6.27□□□□□ -1.41
MRPS28-206ENST00000520946 RPS10P5Q9NQ39 176 aa6.27□□□□□ -1.41
MRPS28-206ENST00000520946 SPANXB1Q9NS25 103 aaPredicted RBP6.27□□□□□ -1.41
MRPS28-206ENST00000520946 TRAV12-1A0A0B4J245 112 aa6.26□□□□□ -1.41
MRPS28-206ENST00000520946 URB1-AS1Q96HZ7 61 aa6.26□□□□□ -1.41
MRPS28-206ENST00000520946 CBY1Q9Y3M2 126 aa6.26□□□□□ -1.41
MRPS28-206ENST00000520946 TRAV23DV6A0A075B6W5 121 aa6.25□□□□□ -1.41
MRPS28-206ENST00000520946 H0Y8G0 127 aa6.25□□□□□ -1.41
MRPS28-206ENST00000520946 IGLV6-57P01721 117 aa6.25□□□□□ -1.41
MRPS28-206ENST00000520946 KRTAP10-6P60371 365 aaPredicted RBP6.25□□□□□ -1.41
MRPS28-206ENST00000520946 IFITM2Q01629 132 aa6.25□□□□□ -1.41
MRPS28-206ENST00000520946 KRTAP19-2Q3LHN2 52 aa6.24□□□□□ -1.41
MRPS28-206ENST00000520946 CLLU1Q5K131 121 aa6.24□□□□□ -1.41
MRPS28-206ENST00000520946 ST20-AS1Q8NBB2 130 aa6.24□□□□□ -1.41
MRPS28-206ENST00000520946 LAMTOR3Q9UHA4 124 aa6.24□□□□□ -1.41
MRPS28-206ENST00000520946 C5orf52A6NGY3 159 aa6.23□□□□□ -1.41
MRPS28-206ENST00000520946 ZNF73O43830 326 aaPredicted RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms