RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 TRAV10A0A0B4J240 114 aa8.82□□□□□ -1
TRAPPC9-208ENST00000520857 DEFB135Q30KP9 77 aa8.82□□□□□ -1
TRAPPC9-208ENST00000520857 C10orf25Q5T742 122 aa8.81□□□□□ -1
TRAPPC9-208ENST00000520857 LINC00482Q8N8I6 264 aa8.81□□□□□ -1
TRAPPC9-208ENST00000520857 DIRC1Q969H9 104 aa8.8□□□□□ -1
TRAPPC9-208ENST00000520857 F8P00451 2351 aa8.8□□□□□ -1
TRAPPC9-208ENST00000520857 A0A1B0GUV1 79 aa8.8□□□□□ -1
TRAPPC9-208ENST00000520857 IGLV1-51P01701 117 aa8.8□□□□□ -1
TRAPPC9-208ENST00000520857 COX17Q14061 63 aa8.8□□□□□ -1
TRAPPC9-208ENST00000520857 Q6ZQT0 140 aa8.8□□□□□ -1
TRAPPC9-208ENST00000520857 CYSRT1A8MQ03 144 aa8.79□□□□□ -1
TRAPPC9-208ENST00000520857 C1orf43Q9BWL3 253 aa8.79□□□□□ -1
TRAPPC9-208ENST00000520857 TRBV10-3A0A0K0K1G6 114 aa8.78□□□□□ -1
TRAPPC9-208ENST00000520857 NDUFC2-KCTD14E9PQ53 114 aa8.78□□□□□ -1
TRAPPC9-208ENST00000520857 CSNK1G2-AS1Q8NCQ2 148 aa8.78□□□□□ -1
TRAPPC9-208ENST00000520857 HIGD2BQ4VC39 106 aa8.77□□□□□ -1.01
TRAPPC9-208ENST00000520857 KIAA0087Q14695 138 aa8.77□□□□□ -1.01
TRAPPC9-208ENST00000520857 DEFB105AQ8NG35 78 aa8.77□□□□□ -1.01
TRAPPC9-208ENST00000520857 Q8NDZ9 215 aa8.76□□□□□ -1.01
TRAPPC9-208ENST00000520857 SERP1Q9Y6X1 66 aa8.76□□□□□ -1.01
TRAPPC9-208ENST00000520857 COX7BP24311 80 aa8.76□□□□□ -1.01
TRAPPC9-208ENST00000520857 Q8N9L7 120 aa8.76□□□□□ -1.01
TRAPPC9-208ENST00000520857 PDE6GP18545 87 aa8.75□□□□□ -1.01
TRAPPC9-208ENST00000520857 MUC7Q8TAX7 377 aa8.75□□□□□ -1.01
TRAPPC9-208ENST00000520857 LINC00167Q96N53 147 aa8.75□□□□□ -1.01
TRAPPC9-208ENST00000520857 C19orf73Q9NVV2 129 aa8.74□□□□□ -1.01
TRAPPC9-208ENST00000520857 IGHV4-28A0A0C4DH34 117 aa8.74□□□□□ -1.01
TRAPPC9-208ENST00000520857 H7BZZ5 65 aa8.74□□□□□ -1.01
TRAPPC9-208ENST00000520857 SPATA3Q8NHX4 192 aa8.74□□□□□ -1.01
TRAPPC9-208ENST00000520857 PKIGQ9Y2B9 76 aa8.74□□□□□ -1.01
TRAPPC9-208ENST00000520857 Q5XG85 94 aa8.74□□□□□ -1.01
TRAPPC9-208ENST00000520857 MPLKIPQ8TAP9 179 aa8.74□□□□□ -1.01
TRAPPC9-208ENST00000520857 CAMK2N2Q96S95 79 aa8.74□□□□□ -1.01
TRAPPC9-208ENST00000520857 TM2D3Q9BRN9 247 aa8.74□□□□□ -1.01
TRAPPC9-208ENST00000520857 ZNF73O43830 326 aaPredicted RBP8.73□□□□□ -1.01
TRAPPC9-208ENST00000520857 NREPQ16612 68 aa8.73□□□□□ -1.01
TRAPPC9-208ENST00000520857 UNC79Q9P2D8 2635 aa8.73□□□□□ -1.01
TRAPPC9-208ENST00000520857 C3orf84H3BNL1 204 aa8.73□□□□□ -1.01
TRAPPC9-208ENST00000520857 BRK1Q8WUW1 75 aa8.72□□□□□ -1.01
TRAPPC9-208ENST00000520857 MIFP14174 115 aa8.71□□□□□ -1.01
TRAPPC9-208ENST00000520857 MRAPQ8TCY5 172 aa8.7□□□□□ -1.02
TRAPPC9-208ENST00000520857 LOC110117498A0A087WWA1 95 aa8.7□□□□□ -1.02
TRAPPC9-208ENST00000520857 BPY2O14599 106 aa8.7□□□□□ -1.02
TRAPPC9-208ENST00000520857 SMIM26A0A096LP01 95 aa8.69□□□□□ -1.02
TRAPPC9-208ENST00000520857 LYPD5Q6UWN5 251 aa8.69□□□□□ -1.02
TRAPPC9-208ENST00000520857 A0A0U1RQV1 116 aa8.69□□□□□ -1.02
TRAPPC9-208ENST00000520857 X6R8D5 127 aa8.69□□□□□ -1.02
TRAPPC9-208ENST00000520857 LINC00336Q6ZUF6 198 aa8.68□□□□□ -1.02
TRAPPC9-208ENST00000520857 LYRM9A8MSI8 78 aa8.68□□□□□ -1.02
TRAPPC9-208ENST00000520857 CXCL6P80162 114 aa8.68□□□□□ -1.02
TRAPPC9-208ENST00000520857 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.68□□□□□ -1.02
TRAPPC9-208ENST00000520857 LINC00474Q9P2X8 69 aa8.68□□□□□ -1.02
TRAPPC9-208ENST00000520857 TRBV7-6A0A0J9YX20 115 aa8.67□□□□□ -1.02
TRAPPC9-208ENST00000520857 TMEM254Q8TBM7 123 aa8.67□□□□□ -1.02
TRAPPC9-208ENST00000520857 ATRQ13535 2644 aa8.66□□□□□ -1.02
TRAPPC9-208ENST00000520857 IGLV6-57P01721 117 aa8.66□□□□□ -1.02
TRAPPC9-208ENST00000520857 KLKP1Q107X0 134 aa8.66□□□□□ -1.02
TRAPPC9-208ENST00000520857 H3BQ85 93 aa8.66□□□□□ -1.02
TRAPPC9-208ENST00000520857 C6orf48Q9UBA6 75 aa8.66□□□□□ -1.02
TRAPPC9-208ENST00000520857 CELA1Q9UNI1 258 aa8.65□□□□□ -1.02
TRAPPC9-208ENST00000520857 FASNP49327 2511 aaKnown RBP8.65□□□□□ -1.02
TRAPPC9-208ENST00000520857 SPART-AS1P0CW21 52 aa8.65□□□□□ -1.02
TRAPPC9-208ENST00000520857 PRB2P02812 416 aaPredicted RBP8.65□□□□□ -1.03
TRAPPC9-208ENST00000520857 NDUFC1O43677 76 aa8.64□□□□□ -1.03
TRAPPC9-208ENST00000520857 APOC4P55056 127 aa8.64□□□□□ -1.03
TRAPPC9-208ENST00000520857 NKAPP1Q8N9T2 125 aa8.64□□□□□ -1.03
TRAPPC9-208ENST00000520857 LELP1Q5T871 98 aa8.64□□□□□ -1.03
TRAPPC9-208ENST00000520857 USP24Q9UPU5 2620 aa8.63□□□□□ -1.03
TRAPPC9-208ENST00000520857 FUSP35637 526 aaKnown RBP eCLIP8.63□□□□□ -1.03
TRAPPC9-208ENST00000520857 BCE1O60756 84 aa8.62□□□□□ -1.03
TRAPPC9-208ENST00000520857 PRO0628Q9UI54 55 aa8.62□□□□□ -1.03
TRAPPC9-208ENST00000520857 IGKV2D-24A0A075B6R9 120 aa8.62□□□□□ -1.03
TRAPPC9-208ENST00000520857 A0A0J9YWU9 116 aa8.62□□□□□ -1.03
TRAPPC9-208ENST00000520857 LRCOL1A6NCL2 159 aa8.62□□□□□ -1.03
TRAPPC9-208ENST00000520857 WIPF1O43516 503 aa8.62□□□□□ -1.03
TRAPPC9-208ENST00000520857 IGHV4-30-4P0DP06 118 aa8.62□□□□□ -1.03
TRAPPC9-208ENST00000520857 FAM30AQ9NZY2 134 aa8.6□□□□□ -1.03
TRAPPC9-208ENST00000520857 M0R378 163 aa8.6□□□□□ -1.03
TRAPPC9-208ENST00000520857 LINC00612Q8N6U2 182 aa8.6□□□□□ -1.03
TRAPPC9-208ENST00000520857 TRBV7-4A0A0J9YYF1 115 aa8.59□□□□□ -1.03
TRAPPC9-208ENST00000520857 C9orf66Q5T8R8 295 aa8.59□□□□□ -1.03
TRAPPC9-208ENST00000520857 PRYO14603 147 aa8.59□□□□□ -1.03
TRAPPC9-208ENST00000520857 ELOF1P60002 83 aaKnown RBP8.59□□□□□ -1.03
TRAPPC9-208ENST00000520857 UBR5O95071 2799 aaPredicted RBP8.59□□□□□ -1.03
TRAPPC9-208ENST00000520857 Q6ZRU5 148 aa8.59□□□□□ -1.03
TRAPPC9-208ENST00000520857 HIGD2AQ9BW72 106 aa8.59□□□□□ -1.03
TRAPPC9-208ENST00000520857 TEP1Q99973 2627 aaKnown RBP8.58□□□□□ -1.04
TRAPPC9-208ENST00000520857 PRR4Q16378 134 aa8.57□□□□□ -1.04
TRAPPC9-208ENST00000520857 WFDC10BQ8IUB3 73 aa8.57□□□□□ -1.04
TRAPPC9-208ENST00000520857 FP248Q71RG6 208 aaPredicted RBP8.57□□□□□ -1.04
TRAPPC9-208ENST00000520857 SMR3AQ99954 134 aa8.57□□□□□ -1.04
TRAPPC9-208ENST00000520857 ITPR2Q14571 2701 aa8.57□□□□□ -1.04
TRAPPC9-208ENST00000520857 ATP5EP56381 51 aaPredicted RBP8.57□□□□□ -1.04
TRAPPC9-208ENST00000520857 C16orf95Q9H693 158 aa8.56□□□□□ -1.04
TRAPPC9-208ENST00000520857 KRTAP1-3Q8IUG1 177 aa8.56□□□□□ -1.04
TRAPPC9-208ENST00000520857 RPL37AP8A6NKH3 93 aa8.55□□□□□ -1.04
TRAPPC9-208ENST00000520857 HECTD1Q9ULT8 2610 aa8.55□□□□□ -1.04
TRAPPC9-208ENST00000520857 VPREB1P12018 145 aa8.55□□□□□ -1.04
TRAPPC9-208ENST00000520857 EGFEM1PQ0D2K5 195 aa8.54□□□□□ -1.04
TRAPPC9-208ENST00000520857 ETDCA0A1B0GVM5 59 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms