RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 A0A0U1RQV1 116 aa11.4□□□□□ -0.58
PABPC1-215ENST00000520804 TMEM170BQ5T4T1 132 aa11.4□□□□□ -0.58
PABPC1-215ENST00000520804 RETNLBQ9BQ08 111 aa11.4□□□□□ -0.58
PABPC1-215ENST00000520804 PLEKHB2Q96CS7 222 aa11.38□□□□□ -0.59
PABPC1-215ENST00000520804 CTAG1AP78358 180 aa11.36□□□□□ -0.59
PABPC1-215ENST00000520804 CBLN2Q8IUK8 224 aa11.36□□□□□ -0.59
PABPC1-215ENST00000520804 MUC17Q685J3 4493 aa11.35□□□□□ -0.59
PABPC1-215ENST00000520804 CHTOPQ9Y3Y2 248 aaKnown RBP11.35□□□□□ -0.59
PABPC1-215ENST00000520804 LINC00158P58513 81 aa11.34□□□□□ -0.59
PABPC1-215ENST00000520804 C3orf22Q8N5N4 141 aa11.33□□□□□ -0.6
PABPC1-215ENST00000520804 HIGD2AQ9BW72 106 aa11.33□□□□□ -0.6
PABPC1-215ENST00000520804 TMEM223A0PJW6 202 aa11.32□□□□□ -0.6
PABPC1-215ENST00000520804 TPRXLQ17RH7 258 aa11.32□□□□□ -0.6
PABPC1-215ENST00000520804 A0A0U1RRA0 63 aa11.31□□□□□ -0.6
PABPC1-215ENST00000520804 IGLV7-46A0A075B6I9 117 aa11.3□□□□□ -0.6
PABPC1-215ENST00000520804 TRAV12-1A0A0B4J245 112 aa11.3□□□□□ -0.6
PABPC1-215ENST00000520804 CDIP1Q9H305 208 aa11.3□□□□□ -0.6
PABPC1-215ENST00000520804 APOC3P02656 99 aa11.29□□□□□ -0.6
PABPC1-215ENST00000520804 SPRR4Q96PI1 79 aa11.29□□□□□ -0.6
PABPC1-215ENST00000520804 FAT4Q6V0I7 4981 aa11.29□□□□□ -0.6
PABPC1-215ENST00000520804 IFI27L1Q96BM0 104 aa11.28□□□□□ -0.6
PABPC1-215ENST00000520804 CHCHD1Q96BP2 118 aaKnown RBP11.28□□□□□ -0.6
PABPC1-215ENST00000520804 SMIM13P0DJ93 91 aa11.27□□□□□ -0.61
PABPC1-215ENST00000520804 SPAG11AQ6PDA7 123 aa11.27□□□□□ -0.61
PABPC1-215ENST00000520804 SNAPINO95295 136 aa11.26□□□□□ -0.61
PABPC1-215ENST00000520804 PRYO14603 147 aa11.25□□□□□ -0.61
PABPC1-215ENST00000520804 ATP6V1G1O75348 118 aa11.25□□□□□ -0.61
PABPC1-215ENST00000520804 MEIG1Q5JSS6 88 aa11.25□□□□□ -0.61
PABPC1-215ENST00000520804 BOD1L2Q8IYS8 172 aa11.25□□□□□ -0.61
PABPC1-215ENST00000520804 SVBPQ8N300 66 aa11.25□□□□□ -0.61
PABPC1-215ENST00000520804 ZNF706Q9Y5V0 76 aaPredicted RBP11.25□□□□□ -0.61
PABPC1-215ENST00000520804 SPRR1AP35321 89 aa11.24□□□□□ -0.61
PABPC1-215ENST00000520804 NDUFA5Q16718 116 aa11.24□□□□□ -0.61
PABPC1-215ENST00000520804 HERV-K104P63124 156 aa11.23□□□□□ -0.61
PABPC1-215ENST00000520804 LCE2AQ5TA79 106 aaPredicted RBP11.23□□□□□ -0.61
PABPC1-215ENST00000520804 MIR7-3HGQ8N6C7 128 aa11.23□□□□□ -0.61
PABPC1-215ENST00000520804 LINC00337Q8N6G1 96 aa11.23□□□□□ -0.61
PABPC1-215ENST00000520804 YPEL4Q96NS1 127 aa11.23□□□□□ -0.61
PABPC1-215ENST00000520804 PPDPFQ9H3Y8 114 aa11.23□□□□□ -0.61
PABPC1-215ENST00000520804 NCR3O14931 201 aa11.22□□□□□ -0.61
PABPC1-215ENST00000520804 KCNQ1DNQ9H478 68 aa11.22□□□□□ -0.61
PABPC1-215ENST00000520804 LINC00587B1AMM8 73 aa11.2□□□□□ -0.62
PABPC1-215ENST00000520804 KRTAP4-16G5E9R7 235 aaPredicted RBP11.2□□□□□ -0.62
PABPC1-215ENST00000520804 C4orf48Q5BLP8 95 aa11.2□□□□□ -0.62
PABPC1-215ENST00000520804 SMCR5Q8TEV8 140 aa11.2□□□□□ -0.62
PABPC1-215ENST00000520804 NDUFA12Q9UI09 145 aa11.19□□□□□ -0.62
PABPC1-215ENST00000520804 ETDCA0A1B0GVM5 59 aa11.18□□□□□ -0.62
PABPC1-215ENST00000520804 HSBP1O75506 76 aa11.18□□□□□ -0.62
PABPC1-215ENST00000520804 FP248Q71RG6 208 aaPredicted RBP11.18□□□□□ -0.62
PABPC1-215ENST00000520804 FAM19A2Q8N3H0 131 aa11.18□□□□□ -0.62
PABPC1-215ENST00000520804 DAND5Q8N907 189 aa11.18□□□□□ -0.62
PABPC1-215ENST00000520804 Q8NBF4 154 aa11.18□□□□□ -0.62
PABPC1-215ENST00000520804 TRBV10-3A0A0K0K1G6 114 aa11.17□□□□□ -0.62
PABPC1-215ENST00000520804 MYMXA0A1B0GTQ4 84 aa11.17□□□□□ -0.62
PABPC1-215ENST00000520804 MAP1LC3CQ9BXW4 147 aa11.17□□□□□ -0.62
PABPC1-215ENST00000520804 KRTAP9-2Q9BYQ4 174 aa11.16□□□□□ -0.62
PABPC1-215ENST00000520804 LINC00483Q53H64 154 aa11.14□□□□□ -0.63
PABPC1-215ENST00000520804 H0Y8G0 127 aa11.13□□□□□ -0.63
PABPC1-215ENST00000520804 TSPEAR-AS2P59090 65 aa11.13□□□□□ -0.63
PABPC1-215ENST00000520804 S100A12P80511 92 aa11.13□□□□□ -0.63
PABPC1-215ENST00000520804 LOC107984156A0A0G2JMH3 177 aa11.12□□□□□ -0.63
PABPC1-215ENST00000520804 B5MCH6 92 aa11.12□□□□□ -0.63
PABPC1-215ENST00000520804 SPINK1P00995 79 aa11.12□□□□□ -0.63
PABPC1-215ENST00000520804 ARL17AQ8IVW1 177 aa11.12□□□□□ -0.63
PABPC1-215ENST00000520804 LEPROTO15243 131 aa11.11□□□□□ -0.63
PABPC1-215ENST00000520804 TRBV10-2A0A0K0K1G8 114 aa11.1□□□□□ -0.63
PABPC1-215ENST00000520804 LEPROTL1O95214 131 aa11.1□□□□□ -0.63
PABPC1-215ENST00000520804 KRTAP13-3Q3SY46 172 aa11.1□□□□□ -0.63
PABPC1-215ENST00000520804 GAGE2AQ6NT46 116 aa11.1□□□□□ -0.63
PABPC1-215ENST00000520804 ERC2-IT1O76042 136 aa11.09□□□□□ -0.63
PABPC1-215ENST00000520804 DDTP30046 118 aa11.09□□□□□ -0.63
PABPC1-215ENST00000520804 PLNP26678 52 aa11.08□□□□□ -0.64
PABPC1-215ENST00000520804 J3QQQ9 107 aa11.07□□□□□ -0.64
PABPC1-215ENST00000520804 TRGC2P03986 189 aa11.07□□□□□ -0.64
PABPC1-215ENST00000520804 LINC00310P59036 64 aa11.07□□□□□ -0.64
PABPC1-215ENST00000520804 SERF1AO75920 110 aa11.06□□□□□ -0.64
PABPC1-215ENST00000520804 MOBPQ13875 183 aa11.06□□□□□ -0.64
PABPC1-215ENST00000520804 Q9BRP9 147 aa11.06□□□□□ -0.64
PABPC1-215ENST00000520804 SPANXB1Q9NS25 103 aaPredicted RBP11.06□□□□□ -0.64
PABPC1-215ENST00000520804 IGLV9-49A0A0B4J1Y8 123 aa11.05□□□□□ -0.64
PABPC1-215ENST00000520804 Q6ZRX8 168 aa11.05□□□□□ -0.64
PABPC1-215ENST00000520804 SSBP3-AS1Q7Z2R9 100 aa11.05□□□□□ -0.64
PABPC1-215ENST00000520804 DPM2O94777 84 aa11.04□□□□□ -0.64
PABPC1-215ENST00000520804 NMUP48645 174 aa11.04□□□□□ -0.64
PABPC1-215ENST00000520804 HERVK_113P61574 105 aa11.04□□□□□ -0.64
PABPC1-215ENST00000520804 RPS29P62273 56 aaKnown RBP11.04□□□□□ -0.64
PABPC1-215ENST00000520804 MIEN1Q9BRT3 115 aa11.04□□□□□ -0.64
PABPC1-215ENST00000520804 HSPB8Q9UJY1 196 aa11.04□□□□□ -0.64
PABPC1-215ENST00000520804 NDUFC2O95298 119 aa11.03□□□□□ -0.64
PABPC1-215ENST00000520804 ASB16-AS1Q495Z4 193 aa11.03□□□□□ -0.64
PABPC1-215ENST00000520804 IGLV6-57P01721 117 aa11.02□□□□□ -0.65
PABPC1-215ENST00000520804 LGALS3P17931 250 aaKnown RBP11.02□□□□□ -0.65
PABPC1-215ENST00000520804 Q8N377 158 aa11.02□□□□□ -0.65
PABPC1-215ENST00000520804 PMCHL2Q9BQD1 86 aa11.02□□□□□ -0.65
PABPC1-215ENST00000520804 IGKCP01834 107 aa11.01□□□□□ -0.65
PABPC1-215ENST00000520804 FABP4P15090 132 aa11.01□□□□□ -0.65
PABPC1-215ENST00000520804 S100A7L2Q5SY68 101 aa11.01□□□□□ -0.65
PABPC1-215ENST00000520804 TRAV23DV6A0A075B6W5 121 aa10.99□□□□□ -0.65
PABPC1-215ENST00000520804 JOSD1Q15040 202 aaPredicted RBP10.98□□□□□ -0.65
PABPC1-215ENST00000520804 SOSTDC1Q6X4U4 206 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms