RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 IGKV2D-26A0A0A0MRZ7 120 aa9.53□□□□□ -0.88
IGHV3-42-201ENST00000520410 IFI27L1Q96BM0 104 aa9.53□□□□□ -0.88
IGHV3-42-201ENST00000520410 CHCHD1Q96BP2 118 aaKnown RBP9.52□□□□□ -0.89
IGHV3-42-201ENST00000520410 HSBP1O75506 76 aa9.51□□□□□ -0.89
IGHV3-42-201ENST00000520410 HIGD2AQ9BW72 106 aa9.51□□□□□ -0.89
IGHV3-42-201ENST00000520410 KRTAP13-1Q8IUC0 172 aa9.5□□□□□ -0.89
IGHV3-42-201ENST00000520410 CBLN2Q8IUK8 224 aa9.5□□□□□ -0.89
IGHV3-42-201ENST00000520410 RNF213Q63HN8 5207 aa9.5□□□□□ -0.89
IGHV3-42-201ENST00000520410 TMEM223A0PJW6 202 aa9.49□□□□□ -0.89
IGHV3-42-201ENST00000520410 LINC00304Q8N9R0 145 aa9.49□□□□□ -0.89
IGHV3-42-201ENST00000520410 TRAV12-1A0A0B4J245 112 aa9.48□□□□□ -0.89
IGHV3-42-201ENST00000520410 M0R378 163 aa9.48□□□□□ -0.89
IGHV3-42-201ENST00000520410 NCR3O14931 201 aa9.48□□□□□ -0.89
IGHV3-42-201ENST00000520410 SMIM13P0DJ93 91 aa9.48□□□□□ -0.89
IGHV3-42-201ENST00000520410 FAM19A2Q8N3H0 131 aa9.48□□□□□ -0.89
IGHV3-42-201ENST00000520410 Q8NDZ9 215 aa9.48□□□□□ -0.89
IGHV3-42-201ENST00000520410 RETNLBQ9BQ08 111 aa9.48□□□□□ -0.89
IGHV3-42-201ENST00000520410 LPAP08519 4548 aa9.47□□□□□ -0.89
IGHV3-42-201ENST00000520410 FAM229BQ4G0N7 80 aa9.47□□□□□ -0.89
IGHV3-42-201ENST00000520410 KRTAP13-2Q52LG2 175 aa9.47□□□□□ -0.89
IGHV3-42-201ENST00000520410 BOD1L2Q8IYS8 172 aa9.47□□□□□ -0.89
IGHV3-42-201ENST00000520410 MIR7-3HGQ8N6C7 128 aa9.45□□□□□ -0.9
IGHV3-42-201ENST00000520410 HERV-K104P63124 156 aa9.43□□□□□ -0.9
IGHV3-42-201ENST00000520410 MAP1LC3CQ9BXW4 147 aa9.43□□□□□ -0.9
IGHV3-42-201ENST00000520410 NDUFA12Q9UI09 145 aa9.43□□□□□ -0.9
IGHV3-42-201ENST00000520410 MYMXA0A1B0GTQ4 84 aa9.42□□□□□ -0.9
IGHV3-42-201ENST00000520410 LEPROTL1O95214 131 aa9.42□□□□□ -0.9
IGHV3-42-201ENST00000520410 S100A12P80511 92 aa9.42□□□□□ -0.9
IGHV3-42-201ENST00000520410 YPEL4Q96NS1 127 aa9.42□□□□□ -0.9
IGHV3-42-201ENST00000520410 ETDCA0A1B0GVM5 59 aa9.41□□□□□ -0.9
IGHV3-42-201ENST00000520410 LINC00587B1AMM8 73 aa9.41□□□□□ -0.9
IGHV3-42-201ENST00000520410 PRYO14603 147 aa9.41□□□□□ -0.9
IGHV3-42-201ENST00000520410 TRGC2P03986 189 aa9.41□□□□□ -0.9
IGHV3-42-201ENST00000520410 C3orf22Q8N5N4 141 aa9.41□□□□□ -0.9
IGHV3-42-201ENST00000520410 PLEKHB2Q96CS7 222 aa9.41□□□□□ -0.9
IGHV3-42-201ENST00000520410 ZNF706Q9Y5V0 76 aaPredicted RBP9.41□□□□□ -0.9
IGHV3-42-201ENST00000520410 FABP4P15090 132 aa9.4□□□□□ -0.9
IGHV3-42-201ENST00000520410 SERF1AO75920 110 aa9.39□□□□□ -0.91
IGHV3-42-201ENST00000520410 HERVK_113P61574 105 aa9.38□□□□□ -0.91
IGHV3-42-201ENST00000520410 DAND5Q8N907 189 aa9.38□□□□□ -0.91
IGHV3-42-201ENST00000520410 MIEN1Q9BRT3 115 aa9.38□□□□□ -0.91
IGHV3-42-201ENST00000520410 PPDPFQ9H3Y8 114 aa9.38□□□□□ -0.91
IGHV3-42-201ENST00000520410 C4orf48Q5BLP8 95 aa9.37□□□□□ -0.91
IGHV3-42-201ENST00000520410 SPRR4Q96PI1 79 aa9.37□□□□□ -0.91
IGHV3-42-201ENST00000520410 PMCHL2Q9BQD1 86 aa9.37□□□□□ -0.91
IGHV3-42-201ENST00000520410 HSPB8Q9UJY1 196 aa9.37□□□□□ -0.91
IGHV3-42-201ENST00000520410 TRBV10-3A0A0K0K1G6 114 aa9.36□□□□□ -0.91
IGHV3-42-201ENST00000520410 A0A0U1RQV1 116 aa9.36□□□□□ -0.91
IGHV3-42-201ENST00000520410 LEPROTO15243 131 aa9.36□□□□□ -0.91
IGHV3-42-201ENST00000520410 LGALS3P17931 250 aaKnown RBP9.36□□□□□ -0.91
IGHV3-42-201ENST00000520410 PLNP26678 52 aa9.36□□□□□ -0.91
IGHV3-42-201ENST00000520410 CDIP1Q9H305 208 aa9.36□□□□□ -0.91
IGHV3-42-201ENST00000520410 TSPEAR-AS2P59090 65 aa9.35□□□□□ -0.91
IGHV3-42-201ENST00000520410 IGLV7-46A0A075B6I9 117 aa9.34□□□□□ -0.91
IGHV3-42-201ENST00000520410 DPM2O94777 84 aa9.34□□□□□ -0.91
IGHV3-42-201ENST00000520410 SMCR5Q8TEV8 140 aa9.34□□□□□ -0.91
IGHV3-42-201ENST00000520410 J3QQQ9 107 aa9.33□□□□□ -0.92
IGHV3-42-201ENST00000520410 IGKCP01834 107 aa9.33□□□□□ -0.92
IGHV3-42-201ENST00000520410 LINC00337Q8N6G1 96 aa9.33□□□□□ -0.92
IGHV3-42-201ENST00000520410 DDTP30046 118 aa9.32□□□□□ -0.92
IGHV3-42-201ENST00000520410 NPC2P61916 151 aa9.32□□□□□ -0.92
IGHV3-42-201ENST00000520410 S100A7L2Q5SY68 101 aa9.32□□□□□ -0.92
IGHV3-42-201ENST00000520410 KCNQ1DNQ9H478 68 aa9.32□□□□□ -0.92
IGHV3-42-201ENST00000520410 LINC00310P59036 64 aa9.31□□□□□ -0.92
IGHV3-42-201ENST00000520410 GAGE2AQ6NT46 116 aa9.31□□□□□ -0.92
IGHV3-42-201ENST00000520410 SPAG11AQ6PDA7 123 aa9.31□□□□□ -0.92
IGHV3-42-201ENST00000520410 SLC7A5P1Q8MH63 180 aa9.3□□□□□ -0.92
IGHV3-42-201ENST00000520410 Q8NBF4 154 aa9.3□□□□□ -0.92
IGHV3-42-201ENST00000520410 IGLV9-49A0A0B4J1Y8 123 aa9.29□□□□□ -0.92
IGHV3-42-201ENST00000520410 NMUP48645 174 aa9.29□□□□□ -0.92
IGHV3-42-201ENST00000520410 SPRR1AP35321 89 aa9.28□□□□□ -0.92
IGHV3-42-201ENST00000520410 SPANXB1Q9NS25 103 aaPredicted RBP9.28□□□□□ -0.92
IGHV3-42-201ENST00000520410 B5MCH6 92 aa9.26□□□□□ -0.93
IGHV3-42-201ENST00000520410 TPRXLQ17RH7 258 aa9.26□□□□□ -0.93
IGHV3-42-201ENST00000520410 TRBV10-2A0A0K0K1G8 114 aa9.25□□□□□ -0.93
IGHV3-42-201ENST00000520410 MOBPQ13875 183 aa9.25□□□□□ -0.93
IGHV3-42-201ENST00000520410 TRAV23DV6A0A075B6W5 121 aa9.24□□□□□ -0.93
IGHV3-42-201ENST00000520410 KRTAP4-16G5E9R7 235 aaPredicted RBP9.24□□□□□ -0.93
IGHV3-42-201ENST00000520410 CTAG1AP78358 180 aa9.24□□□□□ -0.93
IGHV3-42-201ENST00000520410 COLCA2A8K830 154 aa9.23□□□□□ -0.93
IGHV3-42-201ENST00000520410 C9orf153Q5TBE3 101 aa9.23□□□□□ -0.93
IGHV3-42-201ENST00000520410 A0A0J9YXY3 114 aa9.22□□□□□ -0.93
IGHV3-42-201ENST00000520410 ERC2-IT1O76042 136 aa9.22□□□□□ -0.93
IGHV3-42-201ENST00000520410 JOSD1Q15040 202 aaPredicted RBP9.22□□□□□ -0.93
IGHV3-42-201ENST00000520410 Q6ZRX8 168 aa9.22□□□□□ -0.93
IGHV3-42-201ENST00000520410 OR13C6PQ8NH95 151 aa9.22□□□□□ -0.93
IGHV3-42-201ENST00000520410 NDUFC2O95298 119 aa9.21□□□□□ -0.94
IGHV3-42-201ENST00000520410 LOC107984156A0A0G2JMH3 177 aa9.2□□□□□ -0.94
IGHV3-42-201ENST00000520410 E9PLD3 99 aa9.2□□□□□ -0.94
IGHV3-42-201ENST00000520410 SPINK1P00995 79 aa9.2□□□□□ -0.94
IGHV3-42-201ENST00000520410 HINT1P49773 126 aaPredicted RBP9.2□□□□□ -0.94
IGHV3-42-201ENST00000520410 LINC00483Q53H64 154 aa9.2□□□□□ -0.94
IGHV3-42-201ENST00000520410 ARL17AQ8IVW1 177 aa9.2□□□□□ -0.94
IGHV3-42-201ENST00000520410 Q9BRP9 147 aa9.2□□□□□ -0.94
IGHV3-42-201ENST00000520410 SYS1-DBNDD2H3BUS1 97 aa9.19□□□□□ -0.94
IGHV3-42-201ENST00000520410 FP248Q71RG6 208 aaPredicted RBP9.19□□□□□ -0.94
IGHV3-42-201ENST00000520410 ZNF73O43830 326 aaPredicted RBP9.18□□□□□ -0.94
IGHV3-42-201ENST00000520410 IGLV6-57P01721 117 aa9.18□□□□□ -0.94
IGHV3-42-201ENST00000520410 ADAMTSL4-AS1Q5T5F5 129 aa9.18□□□□□ -0.94
IGHV3-42-201ENST00000520410 SOSTDC1Q6X4U4 206 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms