RNA–Protein interactions for RNA: ENST00000520105.5

PTP4A3-203, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-203ENST00000520105 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.91□□□□□ -0.18
PTP4A3-203ENST00000520105 COX17Q14061 63 aa13.91□□□□□ -0.18
PTP4A3-203ENST00000520105 HECTD4Q9Y4D8 3996 aa13.91□□□□□ -0.18
PTP4A3-203ENST00000520105 A6NJY4 79 aa13.91□□□□□ -0.18
PTP4A3-203ENST00000520105 NPC2P61916 151 aa13.91□□□□□ -0.18
PTP4A3-203ENST00000520105 SPANXB1Q9NS25 103 aaPredicted RBP13.91□□□□□ -0.18
PTP4A3-203ENST00000520105 DNAH11Q96DT5 4516 aa13.9□□□□□ -0.18
PTP4A3-203ENST00000520105 EIF4EBP3O60516 100 aaPredicted RBP13.89□□□□□ -0.19
PTP4A3-203ENST00000520105 LINC01620Q4KN68 170 aa13.89□□□□□ -0.19
PTP4A3-203ENST00000520105 SPANXDQ9BXN6 97 aa13.89□□□□□ -0.19
PTP4A3-203ENST00000520105 SPANXCQ9NY87 97 aa13.89□□□□□ -0.19
PTP4A3-203ENST00000520105 NDUFC2-KCTD14E9PQ53 114 aa13.87□□□□□ -0.19
PTP4A3-203ENST00000520105 Q6ZRP5 223 aa13.87□□□□□ -0.19
PTP4A3-203ENST00000520105 RYR3Q15413 4870 aa13.87□□□□□ -0.19
PTP4A3-203ENST00000520105 MUSTN1Q8IVN3 82 aa13.87□□□□□ -0.19
PTP4A3-203ENST00000520105 F8W1H4 67 aa13.86□□□□□ -0.19
PTP4A3-203ENST00000520105 C9orf163Q8N9P6 203 aa13.86□□□□□ -0.19
PTP4A3-203ENST00000520105 GAGE2EQ4V326 116 aa13.85□□□□□ -0.19
PTP4A3-203ENST00000520105 SOSTDC1Q6X4U4 206 aa13.85□□□□□ -0.19
PTP4A3-203ENST00000520105 LINC00308Q8TCZ7 52 aa13.85□□□□□ -0.19
PTP4A3-203ENST00000520105 GAGE2DQ9UEU5 116 aa13.85□□□□□ -0.19
PTP4A3-203ENST00000520105 RPL18AQ02543 176 aaKnown RBP13.84□□□□□ -0.19
PTP4A3-203ENST00000520105 SND1-IT1Q9HBX3 110 aa13.84□□□□□ -0.19
PTP4A3-203ENST00000520105 XAGE1AQ9HD64 81 aa13.84□□□□□ -0.19
PTP4A3-203ENST00000520105 TLX1NBP0CAT3 122 aa13.83□□□□□ -0.2
PTP4A3-203ENST00000520105 KRTAP10-2P60368 255 aa13.83□□□□□ -0.2
PTP4A3-203ENST00000520105 PKD1P98161 4303 aa13.83□□□□□ -0.2
PTP4A3-203ENST00000520105 LOC107984640A0A0U1RRK4 108 aa13.82□□□□□ -0.2
PTP4A3-203ENST00000520105 IGLV5-52A0A0A0MRZ9 124 aa13.81□□□□□ -0.2
PTP4A3-203ENST00000520105 LINC00336Q6ZUF6 198 aa13.81□□□□□ -0.2
PTP4A3-203ENST00000520105 IFITM1P13164 125 aa13.8□□□□□ -0.2
PTP4A3-203ENST00000520105 GAGE2BQ13066 116 aa13.8□□□□□ -0.2
PTP4A3-203ENST00000520105 SDIM1Q6ZPB5 146 aa13.79□□□□□ -0.2
PTP4A3-203ENST00000520105 A0A096LNI7 61 aa13.78□□□□□ -0.2
PTP4A3-203ENST00000520105 PGPEP1Q9NXJ5 209 aa13.78□□□□□ -0.2
PTP4A3-203ENST00000520105 DNAH5Q8TE73 4624 aa13.77□□□□□ -0.2
PTP4A3-203ENST00000520105 C9orf129Q5T035 196 aaKnown RBP13.77□□□□□ -0.21
PTP4A3-203ENST00000520105 LYRM7Q5U5X0 104 aa13.77□□□□□ -0.21
PTP4A3-203ENST00000520105 IGKV2-24A0A0C4DH68 120 aa13.76□□□□□ -0.21
PTP4A3-203ENST00000520105 LOC107984156A0A0G2JMH3 177 aa13.76□□□□□ -0.21
PTP4A3-203ENST00000520105 A4D1N5 150 aa13.76□□□□□ -0.21
PTP4A3-203ENST00000520105 RPL24P83731 157 aaKnown RBP13.76□□□□□ -0.21
PTP4A3-203ENST00000520105 ARL17AQ8IVW1 177 aa13.76□□□□□ -0.21
PTP4A3-203ENST00000520105 PRO0461Q9UI25 63 aa13.76□□□□□ -0.21
PTP4A3-203ENST00000520105 H3BMG7 143 aa13.75□□□□□ -0.21
PTP4A3-203ENST00000520105 Q8NDZ9 215 aa13.75□□□□□ -0.21
PTP4A3-203ENST00000520105 COPS9Q8WXC6 57 aa13.75□□□□□ -0.21
PTP4A3-203ENST00000520105 C16orf90A8MZG2 172 aa13.74□□□□□ -0.21
PTP4A3-203ENST00000520105 J3QR89 54 aa13.74□□□□□ -0.21
PTP4A3-203ENST00000520105 CHTF8P0CG12 524 aa13.74□□□□□ -0.21
PTP4A3-203ENST00000520105 TSPAN13O95857 204 aa13.73□□□□□ -0.21
PTP4A3-203ENST00000520105 PRR3P79522 188 aaKnown RBP13.73□□□□□ -0.21
PTP4A3-203ENST00000520105 FAM168BA1KXE4 195 aa13.71□□□□□ -0.21
PTP4A3-203ENST00000520105 PPDPFQ9H3Y8 114 aa13.71□□□□□ -0.21
PTP4A3-203ENST00000520105 PANO1I0J062 215 aa13.7□□□□□ -0.22
PTP4A3-203ENST00000520105 A0A1B0GVY2 172 aa13.69□□□□□ -0.22
PTP4A3-203ENST00000520105 CFC1BP0CG36 223 aa13.69□□□□□ -0.22
PTP4A3-203ENST00000520105 CFC1P0CG37 223 aa13.69□□□□□ -0.22
PTP4A3-203ENST00000520105 PKIGQ9Y2B9 76 aa13.69□□□□□ -0.22
PTP4A3-203ENST00000520105 SERTAD4-AS1Q5TG53 156 aa13.68□□□□□ -0.22
PTP4A3-203ENST00000520105 TRBV20-1A0A075B6N2 111 aa13.67□□□□□ -0.22
PTP4A3-203ENST00000520105 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.67□□□□□ -0.22
PTP4A3-203ENST00000520105 PKHD1P08F94 4074 aa13.67□□□□□ -0.22
PTP4A3-203ENST00000520105 IGKV2-28A0A075B6P5 120 aa13.67□□□□□ -0.22
PTP4A3-203ENST00000520105 IGKV2D-28P01615 120 aa13.67□□□□□ -0.22
PTP4A3-203ENST00000520105 NDUFC2O95298 119 aa13.66□□□□□ -0.22
PTP4A3-203ENST00000520105 VPREB1P12018 145 aa13.66□□□□□ -0.22
PTP4A3-203ENST00000520105 KRTAP7-1Q8IUC3 87 aa13.66□□□□□ -0.22
PTP4A3-203ENST00000520105 A0A0B4J2C4 111 aa13.65□□□□□ -0.22
PTP4A3-203ENST00000520105 NCR3O14931 201 aa13.65□□□□□ -0.22
PTP4A3-203ENST00000520105 ETDBQ3ZM63 59 aa13.65□□□□□ -0.22
PTP4A3-203ENST00000520105 PRO1854Q9UHT4 67 aa13.65□□□□□ -0.22
PTP4A3-203ENST00000520105 A0A1W2PNN7 141 aa13.65□□□□□ -0.22
PTP4A3-203ENST00000520105 DPH3Q96FX2 82 aa13.65□□□□□ -0.22
PTP4A3-203ENST00000520105 FAM19A5Q7Z5A7 132 aaPredicted RBP13.64□□□□□ -0.23
PTP4A3-203ENST00000520105 KRTAP10-1P60331 282 aa13.63□□□□□ -0.23
PTP4A3-203ENST00000520105 LINC00474Q9P2X8 69 aa13.63□□□□□ -0.23
PTP4A3-203ENST00000520105 LINC00337Q8N6G1 96 aa13.63□□□□□ -0.23
PTP4A3-203ENST00000520105 SPACA4Q8TDM5 124 aa13.63□□□□□ -0.23
PTP4A3-203ENST00000520105 PLA2G2DQ9UNK4 145 aa13.63□□□□□ -0.23
PTP4A3-203ENST00000520105 PSMB2P49721 201 aa13.6□□□□□ -0.23
PTP4A3-203ENST00000520105 FAM30AQ9NZY2 134 aa13.6□□□□□ -0.23
PTP4A3-203ENST00000520105 SCGB1A1P11684 91 aa13.59□□□□□ -0.23
PTP4A3-203ENST00000520105 NKAPP1Q8N9T2 125 aa13.59□□□□□ -0.23
PTP4A3-203ENST00000520105 C22orf24Q9Y442 160 aa13.59□□□□□ -0.23
PTP4A3-203ENST00000520105 DNAH8Q96JB1 4490 aa13.59□□□□□ -0.23
PTP4A3-203ENST00000520105 SMCPP49901 116 aaPredicted RBP13.59□□□□□ -0.23
PTP4A3-203ENST00000520105 OR13C6PQ8NH95 151 aa13.59□□□□□ -0.23
PTP4A3-203ENST00000520105 M0QXV9 152 aa13.58□□□□□ -0.24
PTP4A3-203ENST00000520105 A0A087WYN8 130 aa13.57□□□□□ -0.24
PTP4A3-203ENST00000520105 TCL1BO95988 128 aa13.57□□□□□ -0.24
PTP4A3-203ENST00000520105 IGLV5-37A0A075B6J1 123 aa13.57□□□□□ -0.24
PTP4A3-203ENST00000520105 TRAV13-2A0A0B4J235 113 aa13.57□□□□□ -0.24
PTP4A3-203ENST00000520105 TRBV10-2A0A0K0K1G8 114 aa13.57□□□□□ -0.24
PTP4A3-203ENST00000520105 M0R378 163 aa13.57□□□□□ -0.24
PTP4A3-203ENST00000520105 MTURNQ8N3F0 131 aa13.57□□□□□ -0.24
PTP4A3-203ENST00000520105 H7C2G1 150 aa13.56□□□□□ -0.24
PTP4A3-203ENST00000520105 SIGMAR1Q99720 223 aa13.56□□□□□ -0.24
PTP4A3-203ENST00000520105 DYNC1H1Q14204 4646 aaKnown RBP13.56□□□□□ -0.24
PTP4A3-203ENST00000520105 RPL13AP40429 203 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms