RNA–Protein interactions for RNA: ENST00000519664.1

SYNPO-204, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-204ENST00000519664 Q8IZM0 81 aa8.27□□□□□ -1.09
SYNPO-204ENST00000519664 Q8N2B8 174 aa8.27□□□□□ -1.09
SYNPO-204ENST00000519664 STAB1Q9NY15 2570 aa8.27□□□□□ -1.09
SYNPO-204ENST00000519664 CCKP06307 115 aa8.27□□□□□ -1.09
SYNPO-204ENST00000519664 C4orf26Q17RF5 130 aa8.27□□□□□ -1.09
SYNPO-204ENST00000519664 A0A0J9YWU9 116 aa8.26□□□□□ -1.09
SYNPO-204ENST00000519664 KIR2DL5BQ8NHK3 375 aa8.26□□□□□ -1.09
SYNPO-204ENST00000519664 DMXL1Q9Y485 3027 aa8.26□□□□□ -1.09
SYNPO-204ENST00000519664 BPY2O14599 106 aa8.25□□□□□ -1.09
SYNPO-204ENST00000519664 SEC61GP60059 68 aa8.25□□□□□ -1.09
SYNPO-204ENST00000519664 TRAV7A0A075B6U4 112 aa8.25□□□□□ -1.09
SYNPO-204ENST00000519664 Q6ZTC4 211 aa8.25□□□□□ -1.09
SYNPO-204ENST00000519664 LINC00337Q8N6G1 96 aa8.25□□□□□ -1.09
SYNPO-204ENST00000519664 RPL28P46779 137 aaKnown RBP8.23□□□□□ -1.09
SYNPO-204ENST00000519664 TRBV10-3A0A0K0K1G6 114 aa8.22□□□□□ -1.09
SYNPO-204ENST00000519664 FAM19A1Q7Z5A9 133 aa8.22□□□□□ -1.09
SYNPO-204ENST00000519664 COL6A5A8TX70 2615 aa8.22□□□□□ -1.09
SYNPO-204ENST00000519664 UNC79Q9P2D8 2635 aa8.22□□□□□ -1.09
SYNPO-204ENST00000519664 ZNF73O43830 326 aaPredicted RBP8.22□□□□□ -1.09
SYNPO-204ENST00000519664 WDFY3Q8IZQ1 3526 aa8.21□□□□□ -1.1
SYNPO-204ENST00000519664 WFDC10BQ8IUB3 73 aa8.2□□□□□ -1.1
SYNPO-204ENST00000519664 Q8N3U1 123 aa8.2□□□□□ -1.1
SYNPO-204ENST00000519664 IGHV3OR16-9A0A0B4J2B5 98 aa8.2□□□□□ -1.1
SYNPO-204ENST00000519664 M0R2N4 97 aa8.2□□□□□ -1.1
SYNPO-204ENST00000519664 SOSTDC1Q6X4U4 206 aa8.2□□□□□ -1.1
SYNPO-204ENST00000519664 CELA1Q9UNI1 258 aa8.2□□□□□ -1.1
SYNPO-204ENST00000519664 H0Y9J4 135 aa8.19□□□□□ -1.1
SYNPO-204ENST00000519664 MP68P56378 58 aa8.19□□□□□ -1.1
SYNPO-204ENST00000519664 SPTSSBQ8NFR3 76 aa8.19□□□□□ -1.1
SYNPO-204ENST00000519664 IGLV5-39A0A0G2JS06 123 aa8.19□□□□□ -1.1
SYNPO-204ENST00000519664 Q8N814 137 aa8.19□□□□□ -1.1
SYNPO-204ENST00000519664 C16orf95Q9H693 158 aa8.18□□□□□ -1.1
SYNPO-204ENST00000519664 M0R378 163 aa8.18□□□□□ -1.1
SYNPO-204ENST00000519664 LINC00846Q9NV44 126 aa8.18□□□□□ -1.1
SYNPO-204ENST00000519664 TRAV10A0A0B4J240 114 aa8.17□□□□□ -1.1
SYNPO-204ENST00000519664 EIF4EBP3O60516 100 aaPredicted RBP8.17□□□□□ -1.1
SYNPO-204ENST00000519664 COX17Q14061 63 aa8.17□□□□□ -1.1
SYNPO-204ENST00000519664 A0A1B0GUV1 79 aa8.16□□□□□ -1.1
SYNPO-204ENST00000519664 NDUFB1O75438 58 aa8.15□□□□□ -1.1
SYNPO-204ENST00000519664 FAM19A3Q7Z5A8 133 aa8.15□□□□□ -1.1
SYNPO-204ENST00000519664 KLK9Q2XQG4 91 aa8.15□□□□□ -1.11
SYNPO-204ENST00000519664 FAM218AQ96MZ4 157 aa8.15□□□□□ -1.11
SYNPO-204ENST00000519664 LYPD5Q6UWN5 251 aa8.14□□□□□ -1.11
SYNPO-204ENST00000519664 WIPF1O43516 503 aa8.13□□□□□ -1.11
SYNPO-204ENST00000519664 PRR4Q16378 134 aa8.13□□□□□ -1.11
SYNPO-204ENST00000519664 TRBV7-6A0A0J9YX20 115 aa8.13□□□□□ -1.11
SYNPO-204ENST00000519664 LRCOL1A6NCL2 159 aa8.13□□□□□ -1.11
SYNPO-204ENST00000519664 ZANQ9Y493 2812 aa8.12□□□□□ -1.11
SYNPO-204ENST00000519664 C10orf25Q5T742 122 aa8.12□□□□□ -1.11
SYNPO-204ENST00000519664 EGFEM1PQ0D2K5 195 aa8.11□□□□□ -1.11
SYNPO-204ENST00000519664 WFDC13Q8IUB5 93 aa8.11□□□□□ -1.11
SYNPO-204ENST00000519664 Q6ZRU5 148 aa8.11□□□□□ -1.11
SYNPO-204ENST00000519664 UTP20O75691 2785 aaKnown RBP8.11□□□□□ -1.11
SYNPO-204ENST00000519664 FSHBP01225 129 aa8.1□□□□□ -1.11
SYNPO-204ENST00000519664 PMAIP1Q13794 54 aa8.1□□□□□ -1.11
SYNPO-204ENST00000519664 ZNF575Q86XF7 245 aa8.1□□□□□ -1.11
SYNPO-204ENST00000519664 X6R8D5 127 aa8.1□□□□□ -1.11
SYNPO-204ENST00000519664 IGLV5-45A0A087WSX0 123 aa8.1□□□□□ -1.11
SYNPO-204ENST00000519664 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.09□□□□□ -1.11
SYNPO-204ENST00000519664 B9D2Q9BPU9 175 aa8.09□□□□□ -1.11
SYNPO-204ENST00000519664 LITAFQ99732 161 aa8.09□□□□□ -1.11
SYNPO-204ENST00000519664 TNRC18O15417 2968 aaPredicted RBP8.08□□□□□ -1.12
SYNPO-204ENST00000519664 BCE1O60756 84 aa8.08□□□□□ -1.12
SYNPO-204ENST00000519664 NSD1Q96L73 2696 aaPredicted RBP8.07□□□□□ -1.12
SYNPO-204ENST00000519664 F8WDY8 70 aa8.07□□□□□ -1.12
SYNPO-204ENST00000519664 SMCR5Q8TEV8 140 aa8.07□□□□□ -1.12
SYNPO-204ENST00000519664 MUC3AQ02505 3323 aa8.07□□□□□ -1.12
SYNPO-204ENST00000519664 C14orf177Q52M58 125 aa8.06□□□□□ -1.12
SYNPO-204ENST00000519664 ITPR2Q14571 2701 aa8.06□□□□□ -1.12
SYNPO-204ENST00000519664 PRYO14603 147 aa8.06□□□□□ -1.12
SYNPO-204ENST00000519664 LINC00575Q6W349 94 aa8.06□□□□□ -1.12
SYNPO-204ENST00000519664 ASPMQ8IZT6 3477 aa8.06□□□□□ -1.12
SYNPO-204ENST00000519664 DCHS1Q96JQ0 3298 aa8.06□□□□□ -1.12
SYNPO-204ENST00000519664 A0A096LNT2 108 aa8.06□□□□□ -1.12
SYNPO-204ENST00000519664 SPINK6Q6UWN8 80 aa8.06□□□□□ -1.12
SYNPO-204ENST00000519664 ESRGQ1W209 222 aa8.05□□□□□ -1.12
SYNPO-204ENST00000519664 Q8N9L7 120 aa8.05□□□□□ -1.12
SYNPO-204ENST00000519664 TMEM254Q8TBM7 123 aa8.05□□□□□ -1.12
SYNPO-204ENST00000519664 DEFB116Q30KQ4 102 aa8.05□□□□□ -1.12
SYNPO-204ENST00000519664 DHRS4-AS1Q9P1J3 65 aa8.05□□□□□ -1.12
SYNPO-204ENST00000519664 CELSR2Q9HCU4 2923 aa8.04□□□□□ -1.12
SYNPO-204ENST00000519664 IGKV4-1P06312 121 aa8.03□□□□□ -1.12
SYNPO-204ENST00000519664 C1orf137Q5JT78 98 aa8.03□□□□□ -1.12
SYNPO-204ENST00000519664 FAM30AQ9NZY2 134 aa8.03□□□□□ -1.12
SYNPO-204ENST00000519664 IGLV9-49A0A0B4J1Y8 123 aa8.03□□□□□ -1.12
SYNPO-204ENST00000519664 CHKB-CPT1BH3BT56 60 aa8.03□□□□□ -1.12
SYNPO-204ENST00000519664 LINC00336Q6ZUF6 198 aa8.02□□□□□ -1.13
SYNPO-204ENST00000519664 C6orf48Q9UBA6 75 aa8.02□□□□□ -1.13
SYNPO-204ENST00000519664 A6NED7 52 aa8.02□□□□□ -1.13
SYNPO-204ENST00000519664 Q6ZVQ6 151 aa8.01□□□□□ -1.13
SYNPO-204ENST00000519664 MUC7Q8TAX7 377 aa8.01□□□□□ -1.13
SYNPO-204ENST00000519664 GIG44P09565 113 aaPredicted RBP8.01□□□□□ -1.13
SYNPO-204ENST00000519664 LINC01547P58512 204 aaPredicted RBP8.01□□□□□ -1.13
SYNPO-204ENST00000519664 PRLHP81277 87 aa8□□□□□ -1.13
SYNPO-204ENST00000519664 NF1P21359 2839 aa7.99□□□□□ -1.13
SYNPO-204ENST00000519664 PLAC8L1A1L4L8 177 aa7.99□□□□□ -1.13
SYNPO-204ENST00000519664 PSPHP1O15172 72 aa7.99□□□□□ -1.13
SYNPO-204ENST00000519664 BAHCC1Q9P281 2608 aa7.99□□□□□ -1.13
SYNPO-204ENST00000519664 CSNK1G2-AS1Q8NCQ2 148 aa7.98□□□□□ -1.13
SYNPO-204ENST00000519664 CXCL6P80162 114 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms