RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 IGKV2D-26A0A0A0MRZ7 120 aa7.2□□□□□ -1.26
CSMD1-205ENST00000519623 SFTA2Q6UW10 78 aa7.2□□□□□ -1.26
CSMD1-205ENST00000519623 RETNLBQ9BQ08 111 aa7.2□□□□□ -1.26
CSMD1-205ENST00000519623 CHTOPQ9Y3Y2 248 aaKnown RBP7.19□□□□□ -1.26
CSMD1-205ENST00000519623 TMEM223A0PJW6 202 aa7.18□□□□□ -1.26
CSMD1-205ENST00000519623 APOC3P02656 99 aa7.18□□□□□ -1.26
CSMD1-205ENST00000519623 LINC00158P58513 81 aa7.18□□□□□ -1.26
CSMD1-205ENST00000519623 CBLN2Q8IUK8 224 aa7.18□□□□□ -1.26
CSMD1-205ENST00000519623 TRAV12-1A0A0B4J245 112 aa7.17□□□□□ -1.26
CSMD1-205ENST00000519623 A0A0U1RRA0 63 aa7.17□□□□□ -1.26
CSMD1-205ENST00000519623 CTAG1AP78358 180 aa7.17□□□□□ -1.26
CSMD1-205ENST00000519623 C3orf22Q8N5N4 141 aa7.17□□□□□ -1.26
CSMD1-205ENST00000519623 YPEL4Q96NS1 127 aa7.17□□□□□ -1.26
CSMD1-205ENST00000519623 IFI27L1Q96BM0 104 aa7.16□□□□□ -1.26
CSMD1-205ENST00000519623 HIGD2AQ9BW72 106 aa7.16□□□□□ -1.26
CSMD1-205ENST00000519623 SNAPINO95295 136 aa7.15□□□□□ -1.26
CSMD1-205ENST00000519623 SMIM13P0DJ93 91 aa7.15□□□□□ -1.26
CSMD1-205ENST00000519623 CHCHD1Q96BP2 118 aaKnown RBP7.15□□□□□ -1.26
CSMD1-205ENST00000519623 IGLV7-46A0A075B6I9 117 aa7.14□□□□□ -1.27
CSMD1-205ENST00000519623 TPRXLQ17RH7 258 aa7.14□□□□□ -1.27
CSMD1-205ENST00000519623 SVBPQ8N300 66 aa7.14□□□□□ -1.27
CSMD1-205ENST00000519623 SPRR4Q96PI1 79 aa7.14□□□□□ -1.27
CSMD1-205ENST00000519623 A0A0U1RQV1 116 aa7.13□□□□□ -1.27
CSMD1-205ENST00000519623 SPRR1AP35321 89 aa7.12□□□□□ -1.27
CSMD1-205ENST00000519623 BOD1L2Q8IYS8 172 aa7.12□□□□□ -1.27
CSMD1-205ENST00000519623 MIR7-3HGQ8N6C7 128 aa7.12□□□□□ -1.27
CSMD1-205ENST00000519623 KCNQ1DNQ9H478 68 aa7.12□□□□□ -1.27
CSMD1-205ENST00000519623 KRTAP4-16G5E9R7 235 aaPredicted RBP7.11□□□□□ -1.27
CSMD1-205ENST00000519623 PRYO14603 147 aa7.11□□□□□ -1.27
CSMD1-205ENST00000519623 ATP6V1G1O75348 118 aa7.11□□□□□ -1.27
CSMD1-205ENST00000519623 HERV-K104P63124 156 aa7.11□□□□□ -1.27
CSMD1-205ENST00000519623 NDUFA5Q16718 116 aa7.11□□□□□ -1.27
CSMD1-205ENST00000519623 SPAG11AQ6PDA7 123 aa7.11□□□□□ -1.27
CSMD1-205ENST00000519623 FAM19A2Q8N3H0 131 aa7.11□□□□□ -1.27
CSMD1-205ENST00000519623 LINC00337Q8N6G1 96 aa7.11□□□□□ -1.27
CSMD1-205ENST00000519623 CDIP1Q9H305 208 aa7.11□□□□□ -1.27
CSMD1-205ENST00000519623 MUC17Q685J3 4493 aa7.1□□□□□ -1.27
CSMD1-205ENST00000519623 MEIG1Q5JSS6 88 aa7.1□□□□□ -1.27
CSMD1-205ENST00000519623 LCE2AQ5TA79 106 aaPredicted RBP7.1□□□□□ -1.27
CSMD1-205ENST00000519623 SMCR5Q8TEV8 140 aa7.1□□□□□ -1.27
CSMD1-205ENST00000519623 NDUFA12Q9UI09 145 aa7.1□□□□□ -1.27
CSMD1-205ENST00000519623 NCR3O14931 201 aa7.09□□□□□ -1.27
CSMD1-205ENST00000519623 PPDPFQ9H3Y8 114 aa7.09□□□□□ -1.27
CSMD1-205ENST00000519623 ZNF706Q9Y5V0 76 aaPredicted RBP7.09□□□□□ -1.27
CSMD1-205ENST00000519623 LOC107984156A0A0G2JMH3 177 aa7.08□□□□□ -1.28
CSMD1-205ENST00000519623 TRBV10-3A0A0K0K1G6 114 aa7.08□□□□□ -1.28
CSMD1-205ENST00000519623 LINC00587B1AMM8 73 aa7.08□□□□□ -1.28
CSMD1-205ENST00000519623 HSBP1O75506 76 aa7.08□□□□□ -1.28
CSMD1-205ENST00000519623 ARL17AQ8IVW1 177 aa7.08□□□□□ -1.28
CSMD1-205ENST00000519623 FAT4Q6V0I7 4981 aa7.08□□□□□ -1.28
CSMD1-205ENST00000519623 MYMXA0A1B0GTQ4 84 aa7.07□□□□□ -1.28
CSMD1-205ENST00000519623 TSPEAR-AS2P59090 65 aa7.07□□□□□ -1.28
CSMD1-205ENST00000519623 DAND5Q8N907 189 aa7.07□□□□□ -1.28
CSMD1-205ENST00000519623 ETDCA0A1B0GVM5 59 aa7.06□□□□□ -1.28
CSMD1-205ENST00000519623 LINC00310P59036 64 aa7.06□□□□□ -1.28
CSMD1-205ENST00000519623 LINC00483Q53H64 154 aa7.06□□□□□ -1.28
CSMD1-205ENST00000519623 C4orf48Q5BLP8 95 aa7.06□□□□□ -1.28
CSMD1-205ENST00000519623 Q8NBF4 154 aa7.06□□□□□ -1.28
CSMD1-205ENST00000519623 MAP1LC3CQ9BXW4 147 aa7.06□□□□□ -1.28
CSMD1-205ENST00000519623 B5MCH6 92 aa7.05□□□□□ -1.28
CSMD1-205ENST00000519623 H0Y8G0 127 aa7.05□□□□□ -1.28
CSMD1-205ENST00000519623 LEPROTO15243 131 aa7.05□□□□□ -1.28
CSMD1-205ENST00000519623 TRGC2P03986 189 aa7.05□□□□□ -1.28
CSMD1-205ENST00000519623 FP248Q71RG6 208 aaPredicted RBP7.05□□□□□ -1.28
CSMD1-205ENST00000519623 ERC2-IT1O76042 136 aa7.04□□□□□ -1.28
CSMD1-205ENST00000519623 LEPROTL1O95214 131 aa7.04□□□□□ -1.28
CSMD1-205ENST00000519623 TRBV10-2A0A0K0K1G8 114 aa7.03□□□□□ -1.28
CSMD1-205ENST00000519623 SERF1AO75920 110 aa7.03□□□□□ -1.28
CSMD1-205ENST00000519623 SPINK1P00995 79 aa7.03□□□□□ -1.28
CSMD1-205ENST00000519623 KRTAP9-2Q9BYQ4 174 aa7.03□□□□□ -1.28
CSMD1-205ENST00000519623 J3QQQ9 107 aa7.02□□□□□ -1.29
CSMD1-205ENST00000519623 DDTP30046 118 aa7.02□□□□□ -1.29
CSMD1-205ENST00000519623 KRTAP13-3Q3SY46 172 aa7.02□□□□□ -1.29
CSMD1-205ENST00000519623 GAGE2AQ6NT46 116 aa7.02□□□□□ -1.29
CSMD1-205ENST00000519623 Q9BRP9 147 aa7.02□□□□□ -1.29
CSMD1-205ENST00000519623 PLNP26678 52 aa7.01□□□□□ -1.29
CSMD1-205ENST00000519623 S100A12P80511 92 aa7.01□□□□□ -1.29
CSMD1-205ENST00000519623 DPM2O94777 84 aa7□□□□□ -1.29
CSMD1-205ENST00000519623 IGLV6-57P01721 117 aa7□□□□□ -1.29
CSMD1-205ENST00000519623 FABP4P15090 132 aa7□□□□□ -1.29
CSMD1-205ENST00000519623 SSBP3-AS1Q7Z2R9 100 aa7□□□□□ -1.29
CSMD1-205ENST00000519623 PMCHL2Q9BQD1 86 aa7□□□□□ -1.29
CSMD1-205ENST00000519623 NMUP48645 174 aa6.99□□□□□ -1.29
CSMD1-205ENST00000519623 Q6ZRX8 168 aa6.99□□□□□ -1.29
CSMD1-205ENST00000519623 SPANXB1Q9NS25 103 aaPredicted RBP6.99□□□□□ -1.29
CSMD1-205ENST00000519623 HSPB8Q9UJY1 196 aa6.99□□□□□ -1.29
CSMD1-205ENST00000519623 IGLV9-49A0A0B4J1Y8 123 aa6.98□□□□□ -1.29
CSMD1-205ENST00000519623 EIF4EBP3O60516 100 aaPredicted RBP6.98□□□□□ -1.29
CSMD1-205ENST00000519623 NDUFC2O95298 119 aa6.98□□□□□ -1.29
CSMD1-205ENST00000519623 IGKCP01834 107 aa6.98□□□□□ -1.29
CSMD1-205ENST00000519623 MOBPQ13875 183 aa6.98□□□□□ -1.29
CSMD1-205ENST00000519623 ADAMTSL4-AS1Q5T5F5 129 aa6.98□□□□□ -1.29
CSMD1-205ENST00000519623 SOSTDC1Q6X4U4 206 aa6.98□□□□□ -1.29
CSMD1-205ENST00000519623 LGALS3P17931 250 aaKnown RBP6.97□□□□□ -1.29
CSMD1-205ENST00000519623 HERVK_113P61574 105 aa6.97□□□□□ -1.29
CSMD1-205ENST00000519623 RPS29P62273 56 aaKnown RBP6.97□□□□□ -1.29
CSMD1-205ENST00000519623 ASB16-AS1Q495Z4 193 aa6.97□□□□□ -1.29
CSMD1-205ENST00000519623 Q8N377 158 aa6.97□□□□□ -1.29
CSMD1-205ENST00000519623 COLCA2A8K830 154 aa6.96□□□□□ -1.3
CSMD1-205ENST00000519623 S100A7L2Q5SY68 101 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms