RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 C2orf48Q96LS8 159 aa5.7□□□□□ -1.5
CTNNA1-210ENST00000518825 C6orf99Q4VX62 202 aa5.69□□□□□ -1.5
CTNNA1-210ENST00000518825 TMEM126AQ9H061 195 aa5.69□□□□□ -1.5
CTNNA1-210ENST00000518825 IGKV3D-7A0A0C4DH55 119 aa5.69□□□□□ -1.5
CTNNA1-210ENST00000518825 CYSRT1A8MQ03 144 aa5.69□□□□□ -1.5
CTNNA1-210ENST00000518825 DNAH3Q8TD57 4116 aa5.69□□□□□ -1.5
CTNNA1-210ENST00000518825 A0A087WVE0 104 aa5.69□□□□□ -1.5
CTNNA1-210ENST00000518825 HTN3P15516 51 aa5.69□□□□□ -1.5
CTNNA1-210ENST00000518825 APOC4P55056 127 aa5.69□□□□□ -1.5
CTNNA1-210ENST00000518825 CCKP06307 115 aa5.68□□□□□ -1.5
CTNNA1-210ENST00000518825 C4orf26Q17RF5 130 aa5.68□□□□□ -1.5
CTNNA1-210ENST00000518825 KLK12Q9UKR0 248 aa5.68□□□□□ -1.5
CTNNA1-210ENST00000518825 A0A0J9YWU9 116 aa5.68□□□□□ -1.5
CTNNA1-210ENST00000518825 IGHV4-30-4P0DP06 118 aa5.68□□□□□ -1.5
CTNNA1-210ENST00000518825 MIFP14174 115 aa5.68□□□□□ -1.5
CTNNA1-210ENST00000518825 SEC61GP60059 68 aa5.68□□□□□ -1.5
CTNNA1-210ENST00000518825 LELP1Q5T871 98 aa5.68□□□□□ -1.5
CTNNA1-210ENST00000518825 SPAG11BQ08648 103 aa5.68□□□□□ -1.5
CTNNA1-210ENST00000518825 DNAH1Q9P2D7 4330 aa5.67□□□□□ -1.5
CTNNA1-210ENST00000518825 J3KT08 172 aa5.67□□□□□ -1.5
CTNNA1-210ENST00000518825 A0A1B0GX51 115 aa5.67□□□□□ -1.5
CTNNA1-210ENST00000518825 Q6JHZ5 121 aa5.67□□□□□ -1.5
CTNNA1-210ENST00000518825 LINC00575Q6W349 94 aa5.67□□□□□ -1.5
CTNNA1-210ENST00000518825 CYSTM1Q9H1C7 97 aa5.67□□□□□ -1.5
CTNNA1-210ENST00000518825 IGLV6-57P01721 117 aa5.66□□□□□ -1.5
CTNNA1-210ENST00000518825 LYPD5Q6UWN5 251 aa5.66□□□□□ -1.5
CTNNA1-210ENST00000518825 C3orf22Q8N5N4 141 aa5.66□□□□□ -1.5
CTNNA1-210ENST00000518825 C6orf48Q9UBA6 75 aa5.66□□□□□ -1.5
CTNNA1-210ENST00000518825 FBN1P35555 2871 aaKnown RBP5.66□□□□□ -1.5
CTNNA1-210ENST00000518825 SPART-AS1P0CW21 52 aa5.66□□□□□ -1.5
CTNNA1-210ENST00000518825 A0A0U1RQV1 116 aa5.66□□□□□ -1.5
CTNNA1-210ENST00000518825 M0R2N4 97 aa5.66□□□□□ -1.5
CTNNA1-210ENST00000518825 WFDC9Q8NEX5 89 aa5.66□□□□□ -1.5
CTNNA1-210ENST00000518825 TMEM256-PLSCR3K7ERE1 68 aa5.65□□□□□ -1.5
CTNNA1-210ENST00000518825 KRTAP26-1Q6PEX3 210 aa5.65□□□□□ -1.5
CTNNA1-210ENST00000518825 RPL18AQ02543 176 aaKnown RBP5.65□□□□□ -1.5
CTNNA1-210ENST00000518825 WIPF1O43516 503 aa5.65□□□□□ -1.51
CTNNA1-210ENST00000518825 UQCRQO14949 82 aa5.64□□□□□ -1.51
CTNNA1-210ENST00000518825 XAGE1AQ9HD64 81 aa5.64□□□□□ -1.51
CTNNA1-210ENST00000518825 RETNQ9HD89 108 aa5.64□□□□□ -1.51
CTNNA1-210ENST00000518825 LYSTQ99698 3801 aa5.64□□□□□ -1.51
CTNNA1-210ENST00000518825 S100A7L2Q5SY68 101 aa5.64□□□□□ -1.51
CTNNA1-210ENST00000518825 WFDC10BQ8IUB3 73 aa5.64□□□□□ -1.51
CTNNA1-210ENST00000518825 GVQW2A0A096LPI5 108 aaPredicted RBP5.64□□□□□ -1.51
CTNNA1-210ENST00000518825 JMJD7-PLA2G4BH0Y9G9 81 aa5.64□□□□□ -1.51
CTNNA1-210ENST00000518825 COX7CP15954 63 aa5.64□□□□□ -1.51
CTNNA1-210ENST00000518825 TRBV10-3A0A0K0K1G6 114 aa5.63□□□□□ -1.51
CTNNA1-210ENST00000518825 KRTAP10-11P60412 298 aa5.63□□□□□ -1.51
CTNNA1-210ENST00000518825 hADV29S1A0JD25 119 aa5.62□□□□□ -1.51
CTNNA1-210ENST00000518825 Q6ZQT0 140 aa5.62□□□□□ -1.51
CTNNA1-210ENST00000518825 HIGD2BQ4VC39 106 aa5.61□□□□□ -1.51
CTNNA1-210ENST00000518825 FAM19A1Q7Z5A9 133 aa5.61□□□□□ -1.51
CTNNA1-210ENST00000518825 DSCR8Q96T75 97 aa5.61□□□□□ -1.51
CTNNA1-210ENST00000518825 ATOX1O00244 68 aa5.61□□□□□ -1.51
CTNNA1-210ENST00000518825 UPK3BQ9BT76 320 aa5.61□□□□□ -1.51
CTNNA1-210ENST00000518825 STAB1Q9NY15 2570 aa5.61□□□□□ -1.51
CTNNA1-210ENST00000518825 F8WDY8 70 aa5.61□□□□□ -1.51
CTNNA1-210ENST00000518825 Q6ZQY7 126 aa5.61□□□□□ -1.51
CTNNA1-210ENST00000518825 C15orf56Q8N910 161 aa5.61□□□□□ -1.51
CTNNA1-210ENST00000518825 USP17L23D6RBM5 183 aa5.6□□□□□ -1.51
CTNNA1-210ENST00000518825 CRYGAP11844 174 aa5.6□□□□□ -1.51
CTNNA1-210ENST00000518825 Q6ZTC4 211 aa5.6□□□□□ -1.51
CTNNA1-210ENST00000518825 MUC7Q8TAX7 377 aa5.6□□□□□ -1.51
CTNNA1-210ENST00000518825 KPRPQ5T749 579 aaPredicted RBP5.6□□□□□ -1.51
CTNNA1-210ENST00000518825 VPREB1P12018 145 aa5.6□□□□□ -1.51
CTNNA1-210ENST00000518825 V9GYY9 64 aa5.6□□□□□ -1.51
CTNNA1-210ENST00000518825 FLNBO75369 2602 aaKnown RBP5.59□□□□□ -1.51
CTNNA1-210ENST00000518825 TRAV23DV6A0A075B6W5 121 aa5.59□□□□□ -1.51
CTNNA1-210ENST00000518825 LOC110117498A0A087WWA1 95 aa5.59□□□□□ -1.51
CTNNA1-210ENST00000518825 ZNF561-AS1K7EIQ3 104 aa5.59□□□□□ -1.51
CTNNA1-210ENST00000518825 Q6ZRU5 148 aa5.59□□□□□ -1.51
CTNNA1-210ENST00000518825 RBM3P98179 157 aaKnown RBP5.59□□□□□ -1.51
CTNNA1-210ENST00000518825 ESRGQ1W209 222 aa5.59□□□□□ -1.51
CTNNA1-210ENST00000518825 MAST4O15021 2626 aa5.59□□□□□ -1.52
CTNNA1-210ENST00000518825 FAM236DA0A1B0GTK5 79 aa5.58□□□□□ -1.52
CTNNA1-210ENST00000518825 FAM236CP0DP71 79 aa5.58□□□□□ -1.52
CTNNA1-210ENST00000518825 ZNF73O43830 326 aaPredicted RBP5.58□□□□□ -1.52
CTNNA1-210ENST00000518825 DNAH10Q8IVF4 4471 aa5.58□□□□□ -1.52
CTNNA1-210ENST00000518825 SERP2Q8N6R1 65 aa5.57□□□□□ -1.52
CTNNA1-210ENST00000518825 HUWE1Q7Z6Z7 4374 aaKnown RBP5.57□□□□□ -1.52
CTNNA1-210ENST00000518825 ELOF1P60002 83 aaKnown RBP5.57□□□□□ -1.52
CTNNA1-210ENST00000518825 H3BNG1 76 aa5.57□□□□□ -1.52
CTNNA1-210ENST00000518825 Q6ZRP5 223 aa5.57□□□□□ -1.52
CTNNA1-210ENST00000518825 CAMK2N2Q96S95 79 aa5.57□□□□□ -1.52
CTNNA1-210ENST00000518825 LAMTOR3Q9UHA4 124 aa5.57□□□□□ -1.52
CTNNA1-210ENST00000518825 NOTCH1P46531 2555 aa5.56□□□□□ -1.52
CTNNA1-210ENST00000518825 MRAPQ8TCY5 172 aa5.56□□□□□ -1.52
CTNNA1-210ENST00000518825 DIRC1Q969H9 104 aa5.56□□□□□ -1.52
CTNNA1-210ENST00000518825 ATP5EP2Q5VTU8 51 aa5.55□□□□□ -1.52
CTNNA1-210ENST00000518825 TRBV7-4A0A0J9YYF1 115 aa5.55□□□□□ -1.52
CTNNA1-210ENST00000518825 LINC01547P58512 204 aaPredicted RBP5.55□□□□□ -1.52
CTNNA1-210ENST00000518825 EGFEM1PQ0D2K5 195 aa5.55□□□□□ -1.52
CTNNA1-210ENST00000518825 Q6ZVQ6 151 aa5.55□□□□□ -1.52
CTNNA1-210ENST00000518825 UBL5Q9BZL1 73 aa5.55□□□□□ -1.52
CTNNA1-210ENST00000518825 NDUFC2-KCTD14E9PQ53 114 aa5.54□□□□□ -1.52
CTNNA1-210ENST00000518825 NBEAL1Q6ZS30 2694 aa5.54□□□□□ -1.52
CTNNA1-210ENST00000518825 COX7BP24311 80 aa5.54□□□□□ -1.52
CTNNA1-210ENST00000518825 LINC00528Q8N1L1 170 aa5.54□□□□□ -1.52
CTNNA1-210ENST00000518825 F8P00451 2351 aa5.54□□□□□ -1.52
CTNNA1-210ENST00000518825 CSMD3Q7Z407 3707 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms