RNA–Protein interactions for RNA: ENST00000518043.5

CPS1-210, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 2

Gene CPS1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-210ENST00000518043 Q6ZRU5 148 aa4.44□□□□□ -1.7
CPS1-210ENST00000518043 C2orf48Q96LS8 159 aa4.44□□□□□ -1.7
CPS1-210ENST00000518043 DNAH8Q96JB1 4490 aa4.43□□□□□ -1.7
CPS1-210ENST00000518043 TIMM17BO60830 172 aa4.43□□□□□ -1.7
CPS1-210ENST00000518043 CXCL5P42830 114 aa4.43□□□□□ -1.7
CPS1-210ENST00000518043 HNRNPA3P51991 378 aaKnown RBP4.43□□□□□ -1.7
CPS1-210ENST00000518043 SOSTDC1Q6X4U4 206 aa4.43□□□□□ -1.7
CPS1-210ENST00000518043 SPANXB1Q9NS25 103 aaPredicted RBP4.43□□□□□ -1.7
CPS1-210ENST00000518043 DYNC1H1Q14204 4646 aaKnown RBP4.42□□□□□ -1.7
CPS1-210ENST00000518043 A0A087WTM6 91 aa4.42□□□□□ -1.7
CPS1-210ENST00000518043 PCP4L1A6NKN8 68 aa4.42□□□□□ -1.7
CPS1-210ENST00000518043 SMIM13P0DJ93 91 aa4.42□□□□□ -1.7
CPS1-210ENST00000518043 CNBPP62633 177 aaKnown RBP4.42□□□□□ -1.7
CPS1-210ENST00000518043 HERV-K104P63124 156 aa4.42□□□□□ -1.7
CPS1-210ENST00000518043 CTAG1AP78358 180 aa4.42□□□□□ -1.7
CPS1-210ENST00000518043 C6orf226Q5I0X4 101 aa4.42□□□□□ -1.7
CPS1-210ENST00000518043 C1orf134Q5TEV5 83 aa4.42□□□□□ -1.7
CPS1-210ENST00000518043 Q75L30 129 aa4.42□□□□□ -1.7
CPS1-210ENST00000518043 DAND5Q8N907 189 aa4.42□□□□□ -1.7
CPS1-210ENST00000518043 Q8NDZ9 215 aa4.42□□□□□ -1.7
CPS1-210ENST00000518043 ERG28Q9UKR5 140 aa4.42□□□□□ -1.7
CPS1-210ENST00000518043 HECTD4Q9Y4D8 3996 aa4.42□□□□□ -1.7
CPS1-210ENST00000518043 PKD1P98161 4303 aa4.42□□□□□ -1.7
CPS1-210ENST00000518043 TRBV30A0A0K0K1B3 111 aa4.41□□□□□ -1.7
CPS1-210ENST00000518043 KRTAP29-1A8MX34 341 aaPredicted RBP4.41□□□□□ -1.7
CPS1-210ENST00000518043 F8WDY8 70 aa4.41□□□□□ -1.7
CPS1-210ENST00000518043 PSCAO43653 123 aa4.41□□□□□ -1.7
CPS1-210ENST00000518043 CKS1BP61024 79 aa4.41□□□□□ -1.7
CPS1-210ENST00000518043 SYCNQ0VAF6 134 aa4.41□□□□□ -1.7
CPS1-210ENST00000518043 UBE2V1Q13404 147 aa4.41□□□□□ -1.7
CPS1-210ENST00000518043 KRTAP5-3Q6L8H2 238 aa4.41□□□□□ -1.7
CPS1-210ENST00000518043 SCGB1D4Q6XE38 83 aa4.41□□□□□ -1.7
CPS1-210ENST00000518043 Q8N814 137 aa4.41□□□□□ -1.7
CPS1-210ENST00000518043 CAMK2N2Q96S95 79 aa4.41□□□□□ -1.7
CPS1-210ENST00000518043 SPANXDQ9BXN6 97 aa4.41□□□□□ -1.7
CPS1-210ENST00000518043 SPANXCQ9NY87 97 aa4.41□□□□□ -1.7
CPS1-210ENST00000518043 A0A0U1RRA0 63 aa4.4□□□□□ -1.71
CPS1-210ENST00000518043 FUSP35637 526 aaKnown RBP eCLIP4.4□□□□□ -1.71
CPS1-210ENST00000518043 FXYD2P54710 66 aa4.4□□□□□ -1.71
CPS1-210ENST00000518043 HSD52Q0P140 79 aa4.4□□□□□ -1.71
CPS1-210ENST00000518043 BVES-AS1Q5T3Y7 98 aa4.4□□□□□ -1.71
CPS1-210ENST00000518043 SFTA2Q6UW10 78 aa4.4□□□□□ -1.71
CPS1-210ENST00000518043 MIR7-3HGQ8N6C7 128 aa4.4□□□□□ -1.71
CPS1-210ENST00000518043 CARD19Q96LW7 228 aa4.4□□□□□ -1.71
CPS1-210ENST00000518043 SNHG12Q9BXW3 62 aa4.4□□□□□ -1.71
CPS1-210ENST00000518043 KRTAP9-8Q9BYQ0 159 aa4.4□□□□□ -1.71
CPS1-210ENST00000518043 LOC107984156A0A0G2JMH3 177 aa4.39□□□□□ -1.71
CPS1-210ENST00000518043 TMEM238C9JI98 176 aa4.39□□□□□ -1.71
CPS1-210ENST00000518043 TLX1NBP0CAT3 122 aa4.39□□□□□ -1.71
CPS1-210ENST00000518043 PFN2P35080 140 aa4.39□□□□□ -1.71
CPS1-210ENST00000518043 TAL2Q16559 108 aa4.39□□□□□ -1.71
CPS1-210ENST00000518043 MEIG1Q5JSS6 88 aa4.39□□□□□ -1.71
CPS1-210ENST00000518043 Q6ZRP5 223 aa4.39□□□□□ -1.71
CPS1-210ENST00000518043 KRTAP7-1Q8IUC3 87 aa4.39□□□□□ -1.71
CPS1-210ENST00000518043 MUSTN1Q8IVN3 82 aa4.39□□□□□ -1.71
CPS1-210ENST00000518043 ARL17AQ8IVW1 177 aa4.39□□□□□ -1.71
CPS1-210ENST00000518043 LINC00308Q8TCZ7 52 aa4.39□□□□□ -1.71
CPS1-210ENST00000518043 KRTAP17-1Q9BYP8 105 aa4.39□□□□□ -1.71
CPS1-210ENST00000518043 PPDPFQ9H3Y8 114 aa4.39□□□□□ -1.71
CPS1-210ENST00000518043 SND1-IT1Q9HBX3 110 aa4.39□□□□□ -1.71
CPS1-210ENST00000518043 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.38□□□□□ -1.71
CPS1-210ENST00000518043 NDUFC2-KCTD14E9PQ53 114 aa4.38□□□□□ -1.71
CPS1-210ENST00000518043 HINT1P49773 126 aaPredicted RBP4.38□□□□□ -1.71
CPS1-210ENST00000518043 NPC2P61916 151 aa4.38□□□□□ -1.71
CPS1-210ENST00000518043 GAGE2BQ13066 116 aa4.38□□□□□ -1.71
CPS1-210ENST00000518043 COX17Q14061 63 aa4.38□□□□□ -1.71
CPS1-210ENST00000518043 LINC01620Q4KN68 170 aa4.38□□□□□ -1.71
CPS1-210ENST00000518043 GAGE2EQ4V326 116 aa4.38□□□□□ -1.71
CPS1-210ENST00000518043 C14orf177Q52M58 125 aa4.38□□□□□ -1.71
CPS1-210ENST00000518043 C9orf129Q5T035 196 aaKnown RBP4.38□□□□□ -1.71
CPS1-210ENST00000518043 GAGE2AQ6NT46 116 aa4.38□□□□□ -1.71
CPS1-210ENST00000518043 CEND1Q8N111 149 aa4.38□□□□□ -1.71
CPS1-210ENST00000518043 GAGE2DQ9UEU5 116 aa4.38□□□□□ -1.71
CPS1-210ENST00000518043 A0A1B0GVY2 172 aa4.37□□□□□ -1.71
CPS1-210ENST00000518043 A0A1B0GWB2 263 aa4.37□□□□□ -1.71
CPS1-210ENST00000518043 PANO1I0J062 215 aa4.37□□□□□ -1.71
CPS1-210ENST00000518043 LINC00158P58513 81 aa4.37□□□□□ -1.71
CPS1-210ENST00000518043 RPL24P83731 157 aaKnown RBP4.37□□□□□ -1.71
CPS1-210ENST00000518043 Q6ZVH6 145 aa4.37□□□□□ -1.71
CPS1-210ENST00000518043 C9orf163Q8N9P6 203 aa4.37□□□□□ -1.71
CPS1-210ENST00000518043 HIST1H4GQ99525 98 aa4.37□□□□□ -1.71
CPS1-210ENST00000518043 LRP1BQ9NZR2 4599 aa4.37□□□□□ -1.71
CPS1-210ENST00000518043 IGKV2-28A0A075B6P5 120 aa4.36□□□□□ -1.71
CPS1-210ENST00000518043 A0A096LNI7 61 aa4.36□□□□□ -1.71
CPS1-210ENST00000518043 A4D1N5 150 aa4.36□□□□□ -1.71
CPS1-210ENST00000518043 K7ERJ3 54 aa4.36□□□□□ -1.71
CPS1-210ENST00000518043 IGKV2D-28P01615 120 aa4.36□□□□□ -1.71
CPS1-210ENST00000518043 IFITM1P13164 125 aa4.36□□□□□ -1.71
CPS1-210ENST00000518043 SRSF9Q13242 221 aaKnown RBP eCLIP4.36□□□□□ -1.71
CPS1-210ENST00000518043 SDIM1Q6ZPB5 146 aa4.36□□□□□ -1.71
CPS1-210ENST00000518043 SMIM29Q86T20 159 aa4.36□□□□□ -1.71
CPS1-210ENST00000518043 XAGE1AQ9HD64 81 aa4.36□□□□□ -1.71
CPS1-210ENST00000518043 FAM168BA1KXE4 195 aa4.35□□□□□ -1.71
CPS1-210ENST00000518043 M0R143 59 aa4.35□□□□□ -1.71
CPS1-210ENST00000518043 CHTF8P0CG12 524 aa4.35□□□□□ -1.71
CPS1-210ENST00000518043 VPREB1P12018 145 aa4.35□□□□□ -1.71
CPS1-210ENST00000518043 CIRBPQ14011 172 aaKnown RBP4.35□□□□□ -1.71
CPS1-210ENST00000518043 EPPK1P58107 5090 aaKnown RBP4.34□□□□□ -1.71
CPS1-210ENST00000518043 LOC107984640A0A0U1RRK4 108 aa4.34□□□□□ -1.71
CPS1-210ENST00000518043 CFC1BP0CG36 223 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms