RNA–Protein interactions for RNA: ENST00000517852.5

MDM2-221, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best) BASIC

Gene MDM2, Length 393 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-221ENST00000517852 CLPSL2Q6UWE3 100 aa-0.7□□□□□ -2.52
MDM2-221ENST00000517852 TSLPQ969D9 159 aa-0.7□□□□□ -2.52
MDM2-221ENST00000517852 LINC01600Q96MT4 127 aa-0.7□□□□□ -2.52
MDM2-221ENST00000517852 MGST2Q99735 147 aa-0.7□□□□□ -2.52
MDM2-221ENST00000517852 SNRNP25Q9BV90 132 aaKnown RBP-0.7□□□□□ -2.52
MDM2-221ENST00000517852 FXYD6Q9H0Q3 95 aa-0.7□□□□□ -2.52
MDM2-221ENST00000517852 DYNLRB1Q9NP97 96 aa-0.7□□□□□ -2.52
MDM2-221ENST00000517852 LINC01558Q9Y6Z2 57 aa-0.7□□□□□ -2.52
MDM2-221ENST00000517852 CFTRP13569 1480 aa-0.7□□□□□ -2.52
MDM2-221ENST00000517852 MAGI1Q96QZ7 1491 aaPredicted RBP-0.7□□□□□ -2.52
MDM2-221ENST00000517852 PSME4Q14997 1843 aa-0.71□□□□□ -2.52
MDM2-221ENST00000517852 WDR7Q9Y4E6 1490 aa-0.71□□□□□ -2.52
MDM2-221ENST00000517852 H0YGG7 62 aa-0.71□□□□□ -2.52
MDM2-221ENST00000517852 SELENOWP63302 87 aa-0.71□□□□□ -2.52
MDM2-221ENST00000517852 MEIG1Q5JSS6 88 aa-0.71□□□□□ -2.52
MDM2-221ENST00000517852 C9orf62Q8N4C0 152 aa-0.71□□□□□ -2.52
MDM2-221ENST00000517852 KIAA0556O60303 1618 aa-0.71□□□□□ -2.52
MDM2-221ENST00000517852 KIF21AQ7Z4S6 1674 aa-0.72□□□□□ -2.52
MDM2-221ENST00000517852 SPINK4O60575 86 aa-0.72□□□□□ -2.52
MDM2-221ENST00000517852 H1FX-AS1Q4G0G2 97 aa-0.72□□□□□ -2.52
MDM2-221ENST00000517852 DEFB105AQ8NG35 78 aa-0.72□□□□□ -2.52
MDM2-221ENST00000517852 PPP3R2Q96LZ3 170 aa-0.72□□□□□ -2.52
MDM2-221ENST00000517852 NAA60Q9H7X0 242 aa-0.72□□□□□ -2.52
MDM2-221ENST00000517852 PIK3C2BO00750 1634 aa-0.72□□□□□ -2.52
MDM2-221ENST00000517852 PRDM15P57071 1507 aaPredicted RBP-0.73□□□□□ -2.53
MDM2-221ENST00000517852 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.73□□□□□ -2.53
MDM2-221ENST00000517852 FAM25AB3EWG3 89 aa-0.73□□□□□ -2.53
MDM2-221ENST00000517852 FAM25CB3EWG5 89 aa-0.73□□□□□ -2.53
MDM2-221ENST00000517852 FAM25GB3EWG6 89 aa-0.73□□□□□ -2.53
MDM2-221ENST00000517852 HMGN4O00479 90 aa-0.73□□□□□ -2.53
MDM2-221ENST00000517852 DEFB123Q8N688 67 aa-0.73□□□□□ -2.53
MDM2-221ENST00000517852 ARL11Q969Q4 196 aa-0.73□□□□□ -2.53
MDM2-221ENST00000517852 SPANXDQ9BXN6 97 aa-0.73□□□□□ -2.53
MDM2-221ENST00000517852 LINC00470Q9BZP3 86 aa-0.73□□□□□ -2.53
MDM2-221ENST00000517852 ZNF831Q5JPB2 1677 aa-0.73□□□□□ -2.53
MDM2-221ENST00000517852 NSD3Q9BZ95 1437 aa-0.73□□□□□ -2.53
MDM2-221ENST00000517852 ABCC10Q5T3U5 1492 aa-0.73□□□□□ -2.53
MDM2-221ENST00000517852 PLXNC1O60486 1568 aa-0.74□□□□□ -2.53
MDM2-221ENST00000517852 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.74□□□□□ -2.53
MDM2-221ENST00000517852 UBR1Q8IWV7 1749 aa-0.74□□□□□ -2.53
MDM2-221ENST00000517852 GNG7O60262 68 aa-0.74□□□□□ -2.53
MDM2-221ENST00000517852 Q56UQ5 140 aa-0.74□□□□□ -2.53
MDM2-221ENST00000517852 CEP250Q9BV73 2442 aa-0.74□□□□□ -2.53
MDM2-221ENST00000517852 SHANK2Q9UPX8 1470 aa-0.74□□□□□ -2.53
MDM2-221ENST00000517852 HMGXB3Q12766 1538 aa-0.74□□□□□ -2.53
MDM2-221ENST00000517852 PKD1L3Q7Z443 1732 aa-0.75□□□□□ -2.53
MDM2-221ENST00000517852 SCN11AQ9UI33 1791 aa-0.75□□□□□ -2.53
MDM2-221ENST00000517852 LOC285095A0A1B0GVY8 99 aa-0.75□□□□□ -2.53
MDM2-221ENST00000517852 LINC01546A6NGU7 62 aa-0.75□□□□□ -2.53
MDM2-221ENST00000517852 SFT2D2O95562 160 aa-0.75□□□□□ -2.53
MDM2-221ENST00000517852 PRLHP81277 87 aa-0.75□□□□□ -2.53
MDM2-221ENST00000517852 NCOA3Q9Y6Q9 1424 aa-0.75□□□□□ -2.53
MDM2-221ENST00000517852 GAPVD1Q14C86 1478 aa-0.75□□□□□ -2.53
MDM2-221ENST00000517852 DNMBPQ6XZF7 1577 aa-0.75□□□□□ -2.53
MDM2-221ENST00000517852 ZC3H13Q5T200 1668 aaKnown RBP-0.75□□□□□ -2.53
MDM2-221ENST00000517852 RIMS1Q86UR5 1692 aaKnown RBP-0.75□□□□□ -2.53
MDM2-221ENST00000517852 MIF4GDA9UHW6 222 aaKnown RBP-0.76□□□□□ -2.53
MDM2-221ENST00000517852 DEFB136Q30KP8 78 aa-0.76□□□□□ -2.53
MDM2-221ENST00000517852 MRPL54Q6P161 138 aaKnown RBP-0.76□□□□□ -2.53
MDM2-221ENST00000517852 ATP10BO94823 1461 aa-0.76□□□□□ -2.53
MDM2-221ENST00000517852 POLA1P09884 1462 aaPredicted RBP-0.76□□□□□ -2.53
MDM2-221ENST00000517852 MBD5Q9P267 1494 aa-0.76□□□□□ -2.53
MDM2-221ENST00000517852 SHROOM2Q13796 1616 aa-0.76□□□□□ -2.53
MDM2-221ENST00000517852 NRXN3Q9Y4C0 1643 aa-0.76□□□□□ -2.53
MDM2-221ENST00000517852 POLR1AO95602 1720 aaPredicted RBP-0.76□□□□□ -2.53
MDM2-221ENST00000517852 C4AP0C0L4 1744 aa-0.76□□□□□ -2.53
MDM2-221ENST00000517852 C4BP0C0L5 1744 aa-0.76□□□□□ -2.53
MDM2-221ENST00000517852 TCHHQ07283 1943 aa-0.77□□□□□ -2.53
MDM2-221ENST00000517852 BTAF1O14981 1849 aa-0.77□□□□□ -2.53
MDM2-221ENST00000517852 UNC13AQ9UPW8 1703 aa-0.77□□□□□ -2.53
MDM2-221ENST00000517852 PLCH1Q4KWH8 1693 aa-0.77□□□□□ -2.53
MDM2-221ENST00000517852 MAST1Q9Y2H9 1570 aa-0.77□□□□□ -2.53
MDM2-221ENST00000517852 CUX1P39880 1505 aa-0.77□□□□□ -2.53
MDM2-221ENST00000517852 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.77□□□□□ -2.53
MDM2-221ENST00000517852 TULP4Q9NRJ4 1543 aa-0.77□□□□□ -2.53
MDM2-221ENST00000517852 CPSF1Q10570 1443 aaKnown RBP-0.77□□□□□ -2.53
MDM2-221ENST00000517852 TNP1P09430 55 aa-0.77□□□□□ -2.53
MDM2-221ENST00000517852 BTG2P78543 158 aa-0.77□□□□□ -2.53
MDM2-221ENST00000517852 CCDC58Q4VC31 144 aa-0.77□□□□□ -2.53
MDM2-221ENST00000517852 TMEM263Q8WUH6 116 aaKnown RBP-0.77□□□□□ -2.53
MDM2-221ENST00000517852 SPRR4Q96PI1 79 aa-0.77□□□□□ -2.53
MDM2-221ENST00000517852 PRO3102Q9H379 93 aa-0.77□□□□□ -2.53
MDM2-221ENST00000517852 APLNQ9ULZ1 77 aa-0.77□□□□□ -2.53
MDM2-221ENST00000517852 FOCADQ5VW36 1801 aa-0.78□□□□□ -2.53
MDM2-221ENST00000517852 ANKRD36CQ5JPF3 1778 aa-0.78□□□□□ -2.53
MDM2-221ENST00000517852 LY75O60449 1722 aa-0.78□□□□□ -2.53
MDM2-221ENST00000517852 KIF21BO75037 1637 aa-0.78□□□□□ -2.53
MDM2-221ENST00000517852 NDUFA2O43678 99 aa-0.78□□□□□ -2.53
MDM2-221ENST00000517852 APOC2P02655 101 aa-0.78□□□□□ -2.53
MDM2-221ENST00000517852 MGPP08493 103 aa-0.78□□□□□ -2.53
MDM2-221ENST00000517852 FGF7P21781 194 aa-0.78□□□□□ -2.53
MDM2-221ENST00000517852 UBE2D3P61077 147 aa-0.78□□□□□ -2.53
MDM2-221ENST00000517852 UBE2D2P62837 147 aa-0.78□□□□□ -2.53
MDM2-221ENST00000517852 CATR1Q13166 79 aa-0.78□□□□□ -2.53
MDM2-221ENST00000517852 COX6B2Q6YFQ2 88 aa-0.78□□□□□ -2.53
MDM2-221ENST00000517852 C8orf59Q8N0T1 100 aaPredicted RBP-0.78□□□□□ -2.53
MDM2-221ENST00000517852 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.78□□□□□ -2.53
MDM2-221ENST00000517852 MRPL34Q9BQ48 92 aaKnown RBP-0.78□□□□□ -2.53
MDM2-221ENST00000517852 LINC00474Q9P2X8 69 aa-0.78□□□□□ -2.53
MDM2-221ENST00000517852 A0A0G2JMZ2 1700 aa-0.78□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms