RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 ASXL3Q9C0F0 2248 aa3.11□□□□□ -1.91
HMGB1P19-201ENST00000517578 IGKV3-7A0A075B6H7 116 aa3.1□□□□□ -1.91
HMGB1P19-201ENST00000517578 A0A1W2PNM2 257 aa3.1□□□□□ -1.91
HMGB1P19-201ENST00000517578 G3V318 75 aa3.1□□□□□ -1.91
HMGB1P19-201ENST00000517578 PRB1P04280 392 aa3.1□□□□□ -1.91
HMGB1P19-201ENST00000517578 MSMBP08118 114 aa3.1□□□□□ -1.91
HMGB1P19-201ENST00000517578 CCL5P13501 91 aa3.1□□□□□ -1.91
HMGB1P19-201ENST00000517578 HTN1P15515 57 aa3.1□□□□□ -1.91
HMGB1P19-201ENST00000517578 CMC4P56277 68 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P19-201ENST00000517578 REG3GQ6UW15 175 aa3.1□□□□□ -1.91
HMGB1P19-201ENST00000517578 C5orf56Q8N8D9 126 aa3.1□□□□□ -1.91
HMGB1P19-201ENST00000517578 IGKV3-20P01619 116 aa3.09□□□□□ -1.91
HMGB1P19-201ENST00000517578 DSCR10P59022 87 aa3.09□□□□□ -1.91
HMGB1P19-201ENST00000517578 MIR22HGQ0VDD5 57 aa3.09□□□□□ -1.91
HMGB1P19-201ENST00000517578 CSAG1Q6PB30 78 aa3.09□□□□□ -1.91
HMGB1P19-201ENST00000517578 CACNA1GO43497 2377 aa3.09□□□□□ -1.92
HMGB1P19-201ENST00000517578 ABCA4P78363 2273 aa3.08□□□□□ -1.92
HMGB1P19-201ENST00000517578 KRTAP16-1A8MUX0 517 aa3.08□□□□□ -1.92
HMGB1P19-201ENST00000517578 ACYP2P14621 99 aa3.08□□□□□ -1.92
HMGB1P19-201ENST00000517578 DEFB1P60022 68 aa3.08□□□□□ -1.92
HMGB1P19-201ENST00000517578 C1orf137Q5JT78 98 aa3.08□□□□□ -1.92
HMGB1P19-201ENST00000517578 CR1P17927 2039 aa3.08□□□□□ -1.92
HMGB1P19-201ENST00000517578 TRGV1A0A0A0MS02 117 aa3.07□□□□□ -1.92
HMGB1P19-201ENST00000517578 IGKV3OR2-268A0A0C4DH90 116 aa3.07□□□□□ -1.92
HMGB1P19-201ENST00000517578 RPL37AP8A6NKH3 93 aa3.07□□□□□ -1.92
HMGB1P19-201ENST00000517578 B4DSR2 109 aa3.07□□□□□ -1.92
HMGB1P19-201ENST00000517578 K7EQZ3 153 aa3.07□□□□□ -1.92
HMGB1P19-201ENST00000517578 PRB2P02812 416 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P19-201ENST00000517578 A0A087WSZ3 146 aa3.06□□□□□ -1.92
HMGB1P19-201ENST00000517578 IGLV5-52A0A0A0MRZ9 124 aa3.06□□□□□ -1.92
HMGB1P19-201ENST00000517578 A0A1B0GU69 56 aa3.06□□□□□ -1.92
HMGB1P19-201ENST00000517578 A8MWP4 228 aa3.06□□□□□ -1.92
HMGB1P19-201ENST00000517578 CDK2AP2O75956 126 aa3.06□□□□□ -1.92
HMGB1P19-201ENST00000517578 SEC61BP60468 96 aaKnown RBP3.06□□□□□ -1.92
HMGB1P19-201ENST00000517578 ICE1Q9Y2F5 2266 aa3.05□□□□□ -1.92
HMGB1P19-201ENST00000517578 K7ERS5 55 aa3.05□□□□□ -1.92
HMGB1P19-201ENST00000517578 MT3P25713 68 aa3.05□□□□□ -1.92
HMGB1P19-201ENST00000517578 C16orf74Q96GX8 76 aa3.05□□□□□ -1.92
HMGB1P19-201ENST00000517578 IGLV5-37A0A075B6J1 123 aa3.04□□□□□ -1.92
HMGB1P19-201ENST00000517578 DEFB131AP59861 70 aa3.04□□□□□ -1.92
HMGB1P19-201ENST00000517578 Q6ZR54 194 aa3.04□□□□□ -1.92
HMGB1P19-201ENST00000517578 WFDC10BQ8IUB3 73 aa3.04□□□□□ -1.92
HMGB1P19-201ENST00000517578 WFDC13Q8IUB5 93 aa3.04□□□□□ -1.92
HMGB1P19-201ENST00000517578 Q8N377 158 aa3.04□□□□□ -1.92
HMGB1P19-201ENST00000517578 DMAC1Q96GE9 116 aa3.04□□□□□ -1.92
HMGB1P19-201ENST00000517578 FAM186AA6NE01 2351 aa3.04□□□□□ -1.92
HMGB1P19-201ENST00000517578 MED13LQ71F56 2210 aa3.04□□□□□ -1.92
HMGB1P19-201ENST00000517578 IGLV10-54A0A075B6I4 117 aa3.03□□□□□ -1.92
HMGB1P19-201ENST00000517578 IGLV1-50A0A075B6I6 118 aa3.03□□□□□ -1.92
HMGB1P19-201ENST00000517578 H3BUX3 64 aa3.03□□□□□ -1.92
HMGB1P19-201ENST00000517578 EGFEM1PQ0D2K5 195 aa3.03□□□□□ -1.92
HMGB1P19-201ENST00000517578 KRTAP25-1Q3LHN0 102 aa3.03□□□□□ -1.92
HMGB1P19-201ENST00000517578 ADM2Q7Z4H4 148 aa3.03□□□□□ -1.92
HMGB1P19-201ENST00000517578 HRES1P13985 223 aa3.02□□□□□ -1.93
HMGB1P19-201ENST00000517578 TECTAO75443 2155 aa3.02□□□□□ -1.93
HMGB1P19-201ENST00000517578 WDR87Q6ZQQ6 2873 aa3.02□□□□□ -1.93
HMGB1P19-201ENST00000517578 Q8NDZ9 215 aa3.01□□□□□ -1.93
HMGB1P19-201ENST00000517578 DEFB105AQ8NG35 78 aa3.01□□□□□ -1.93
HMGB1P19-201ENST00000517578 AHCTF1Q8WYP5 2266 aa3.01□□□□□ -1.93
HMGB1P19-201ENST00000517578 DOPEY2Q9Y3R5 2298 aa3□□□□□ -1.93
HMGB1P19-201ENST00000517578 LINC01565O15544 149 aa3□□□□□ -1.93
HMGB1P19-201ENST00000517578 ZNF861PO60384 105 aa3□□□□□ -1.93
HMGB1P19-201ENST00000517578 REG3AQ06141 175 aa3□□□□□ -1.93
HMGB1P19-201ENST00000517578 UNQ6190/PRO20217Q6UXQ8 127 aa3□□□□□ -1.93
HMGB1P19-201ENST00000517578 C7orf33Q8WU49 177 aa3□□□□□ -1.93
HMGB1P19-201ENST00000517578 IGLV8-61A0A075B6I0 122 aa2.99□□□□□ -1.93
HMGB1P19-201ENST00000517578 A6NDX4 124 aa2.99□□□□□ -1.93
HMGB1P19-201ENST00000517578 ANGP03950 147 aaKnown RBP2.99□□□□□ -1.93
HMGB1P19-201ENST00000517578 Q6ZRX8 168 aa2.99□□□□□ -1.93
HMGB1P19-201ENST00000517578 CAMK2N2Q96S95 79 aa2.99□□□□□ -1.93
HMGB1P19-201ENST00000517578 CACNA1EQ15878 2313 aa2.99□□□□□ -1.93
HMGB1P19-201ENST00000517578 IGKV2-24A0A0C4DH68 120 aa2.98□□□□□ -1.93
HMGB1P19-201ENST00000517578 LYNX1G3V0Z9 82 aa2.98□□□□□ -1.93
HMGB1P19-201ENST00000517578 LYNX1P0DP58 116 aa2.98□□□□□ -1.93
HMGB1P19-201ENST00000517578 NOP10Q9NPE3 64 aaKnown RBP2.98□□□□□ -1.93
HMGB1P19-201ENST00000517578 C6orf48Q9UBA6 75 aa2.98□□□□□ -1.93
HMGB1P19-201ENST00000517578 SPTBN1Q01082 2364 aaKnown RBP2.97□□□□□ -1.93
HMGB1P19-201ENST00000517578 DEFB109BQ30KR1 87 aa2.97□□□□□ -1.93
HMGB1P19-201ENST00000517578 LINC00483Q53H64 154 aa2.97□□□□□ -1.93
HMGB1P19-201ENST00000517578 PCOTHQ58A44 107 aa2.97□□□□□ -1.93
HMGB1P19-201ENST00000517578 PRR34Q9NV39 138 aa2.97□□□□□ -1.93
HMGB1P19-201ENST00000517578 PRO0255Q9UI72 69 aa2.97□□□□□ -1.93
HMGB1P19-201ENST00000517578 NUPR2A6NF83 97 aa2.96□□□□□ -1.94
HMGB1P19-201ENST00000517578 IGLV7-43P04211 117 aa2.96□□□□□ -1.94
HMGB1P19-201ENST00000517578 KRTAP10-5P60370 271 aa2.96□□□□□ -1.94
HMGB1P19-201ENST00000517578 DEFB116Q30KQ4 102 aa2.96□□□□□ -1.94
HMGB1P19-201ENST00000517578 KRTAP5-1Q6L8H4 278 aa2.96□□□□□ -1.94
HMGB1P19-201ENST00000517578 PCNTO95613 3336 aa2.95□□□□□ -1.94
HMGB1P19-201ENST00000517578 CACNA1BQ00975 2339 aa2.94□□□□□ -1.94
HMGB1P19-201ENST00000517578 CHTF8P0CG12 524 aa2.94□□□□□ -1.94
HMGB1P19-201ENST00000517578 SPRR1AP35321 89 aa2.94□□□□□ -1.94
HMGB1P19-201ENST00000517578 C20orf166-AS1Q96NR2 134 aa2.94□□□□□ -1.94
HMGB1P19-201ENST00000517578 PRO3102Q9H379 93 aa2.94□□□□□ -1.94
HMGB1P19-201ENST00000517578 CEP250Q9BV73 2442 aa2.94□□□□□ -1.94
HMGB1P19-201ENST00000517578 SDK1Q7Z5N4 2213 aa2.93□□□□□ -1.94
HMGB1P19-201ENST00000517578 ZFHX3Q15911 3703 aa2.93□□□□□ -1.94
HMGB1P19-201ENST00000517578 IGFL1Q6UW32 110 aa2.93□□□□□ -1.94
HMGB1P19-201ENST00000517578 LINC00472Q9H8W2 130 aa2.93□□□□□ -1.94
HMGB1P19-201ENST00000517578 IGLV9-49A0A0B4J1Y8 123 aa2.92□□□□□ -1.94
HMGB1P19-201ENST00000517578 MMP24-AS1A0A0U1RRL7 71 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms