RNA–Protein interactions for RNA: ENST00000517354.5

CPNE3-201, Transcript of copine 3, humanhuman

TSL 4

Gene CPNE3, Length 566 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-201ENST00000517354 DYNLRB2Q8TF09 96 aa2.36□□□□□ -2.03
CPNE3-201ENST00000517354 C20orf78Q9BR46 151 aa2.36□□□□□ -2.03
CPNE3-201ENST00000517354 ALPK2Q86TB3 2170 aa2.36□□□□□ -2.03
CPNE3-201ENST00000517354 NINQ8N4C6 2090 aa2.35□□□□□ -2.03
CPNE3-201ENST00000517354 HEATR5BQ9P2D3 2071 aa2.35□□□□□ -2.03
CPNE3-201ENST00000517354 A0A096LNT2 108 aa2.35□□□□□ -2.03
CPNE3-201ENST00000517354 SFT2D2O95562 160 aa2.35□□□□□ -2.03
CPNE3-201ENST00000517354 CBLN1P23435 193 aa2.35□□□□□ -2.03
CPNE3-201ENST00000517354 RHOHQ15669 191 aa2.35□□□□□ -2.03
CPNE3-201ENST00000517354 Q5BKY6 102 aa2.35□□□□□ -2.03
CPNE3-201ENST00000517354 SPANXN1Q5VSR9 72 aa2.35□□□□□ -2.03
CPNE3-201ENST00000517354 UNQ6190/PRO20217Q6UXQ8 127 aa2.35□□□□□ -2.03
CPNE3-201ENST00000517354 Q8TAT8 98 aa2.35□□□□□ -2.03
CPNE3-201ENST00000517354 CYSTM1Q9H1C7 97 aa2.35□□□□□ -2.03
CPNE3-201ENST00000517354 ORMDL1Q9P0S3 153 aa2.35□□□□□ -2.03
CPNE3-201ENST00000517354 LINC00474Q9P2X8 69 aa2.35□□□□□ -2.03
CPNE3-201ENST00000517354 MED12LQ86YW9 2145 aa2.35□□□□□ -2.03
CPNE3-201ENST00000517354 LOC285095A0A1B0GVY8 99 aa2.34□□□□□ -2.03
CPNE3-201ENST00000517354 CYB5AP00167 134 aa2.34□□□□□ -2.03
CPNE3-201ENST00000517354 IGKCP01834 107 aa2.34□□□□□ -2.03
CPNE3-201ENST00000517354 TFF1P04155 84 aa2.34□□□□□ -2.03
CPNE3-201ENST00000517354 ASIPP42127 132 aa2.34□□□□□ -2.03
CPNE3-201ENST00000517354 UBE2G1P62253 170 aa2.34□□□□□ -2.03
CPNE3-201ENST00000517354 CNBPP62633 177 aaKnown RBP2.34□□□□□ -2.03
CPNE3-201ENST00000517354 COMMD6Q7Z4G1 85 aa2.34□□□□□ -2.03
CPNE3-201ENST00000517354 TSLPQ969D9 159 aa2.34□□□□□ -2.03
CPNE3-201ENST00000517354 TMEM141Q96I45 108 aa2.34□□□□□ -2.03
CPNE3-201ENST00000517354 CDC42SE1Q9NRR8 79 aa2.34□□□□□ -2.03
CPNE3-201ENST00000517354 BIRC6Q9NR09 4857 aa2.33□□□□□ -2.04
CPNE3-201ENST00000517354 IGKV2-40A0A087WW87 121 aaPredicted RBP2.33□□□□□ -2.04
CPNE3-201ENST00000517354 IGLC7A0M8Q6 106 aa2.33□□□□□ -2.04
CPNE3-201ENST00000517354 PIN1P1O15428 100 aa2.33□□□□□ -2.04
CPNE3-201ENST00000517354 IGKV2D-40P01614 121 aaPredicted RBP2.33□□□□□ -2.04
CPNE3-201ENST00000517354 CCKP06307 115 aa2.33□□□□□ -2.04
CPNE3-201ENST00000517354 TRAPPC2P0DI81 140 aa2.33□□□□□ -2.04
CPNE3-201ENST00000517354 TRAPPC2BP0DI82 140 aa2.33□□□□□ -2.04
CPNE3-201ENST00000517354 MIR22HGQ0VDD5 57 aa2.33□□□□□ -2.04
CPNE3-201ENST00000517354 S100A13Q99584 98 aa2.33□□□□□ -2.04
CPNE3-201ENST00000517354 F8W1H4 67 aa2.32□□□□□ -2.04
CPNE3-201ENST00000517354 APOC3P02656 99 aa2.32□□□□□ -2.04
CPNE3-201ENST00000517354 GYPAP02724 150 aa2.32□□□□□ -2.04
CPNE3-201ENST00000517354 EFNA4P52798 201 aa2.32□□□□□ -2.04
CPNE3-201ENST00000517354 NCBP2-AS2Q69YL0 99 aa2.32□□□□□ -2.04
CPNE3-201ENST00000517354 SLC48A1Q6P1K1 146 aa2.32□□□□□ -2.04
CPNE3-201ENST00000517354 FAM213BQ8TBF2 198 aa2.32□□□□□ -2.04
CPNE3-201ENST00000517354 UQCR10Q9UDW1 63 aa2.32□□□□□ -2.04
CPNE3-201ENST00000517354 COL7A1Q02388 2944 aa2.32□□□□□ -2.04
CPNE3-201ENST00000517354 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
CPNE3-201ENST00000517354 PCLOQ9Y6V0 5065 aa2.32□□□□□ -2.04
CPNE3-201ENST00000517354 IGKV3-7A0A075B6H7 116 aa2.31□□□□□ -2.04
CPNE3-201ENST00000517354 TRBV7-7A0A0K0K1E9 115 aa2.31□□□□□ -2.04
CPNE3-201ENST00000517354 IGKV2-29A2NJV5 120 aaPredicted RBP2.31□□□□□ -2.04
CPNE3-201ENST00000517354 FAUP35544 74 aaKnown RBP2.31□□□□□ -2.04
CPNE3-201ENST00000517354 MPV17LQ2QL34 196 aa2.31□□□□□ -2.04
CPNE3-201ENST00000517354 SPTSSBQ8NFR3 76 aa2.31□□□□□ -2.04
CPNE3-201ENST00000517354 S100A16Q96FQ6 103 aaKnown RBP2.31□□□□□ -2.04
CPNE3-201ENST00000517354 AMELYQ99218 206 aa2.31□□□□□ -2.04
CPNE3-201ENST00000517354 EPPK1P58107 5090 aaKnown RBP2.31□□□□□ -2.04
CPNE3-201ENST00000517354 CMYA5Q8N3K9 4069 aa2.31□□□□□ -2.04
CPNE3-201ENST00000517354 HEATR1Q9H583 2144 aaKnown RBP2.3□□□□□ -2.04
CPNE3-201ENST00000517354 TRBV6-4A0A1B0GX49 114 aa2.3□□□□□ -2.04
CPNE3-201ENST00000517354 H3BRM9 83 aa2.3□□□□□ -2.04
CPNE3-201ENST00000517354 ATOX1O00244 68 aa2.3□□□□□ -2.04
CPNE3-201ENST00000517354 DEFA5Q01523 94 aa2.3□□□□□ -2.04
CPNE3-201ENST00000517354 PROK2Q9HC23 129 aa2.3□□□□□ -2.04
CPNE3-201ENST00000517354 EXPH5Q8NEV8 1989 aa2.3□□□□□ -2.04
CPNE3-201ENST00000517354 PDCD5O14737 125 aa2.29□□□□□ -2.04
CPNE3-201ENST00000517354 GNG11P61952 73 aa2.29□□□□□ -2.04
CPNE3-201ENST00000517354 SEC11AP67812 179 aa2.29□□□□□ -2.04
CPNE3-201ENST00000517354 C9orf116Q5BN46 136 aaPredicted RBP2.29□□□□□ -2.04
CPNE3-201ENST00000517354 RPL7L1Q6DKI1 246 aaKnown RBP2.29□□□□□ -2.04
CPNE3-201ENST00000517354 KRTAP26-1Q6PEX3 210 aa2.29□□□□□ -2.04
CPNE3-201ENST00000517354 OR10AG1Q8NH19 301 aa2.29□□□□□ -2.04
CPNE3-201ENST00000517354 SMCO4Q9NRQ5 59 aa2.29□□□□□ -2.04
CPNE3-201ENST00000517354 MRPL35Q9NZE8 188 aaKnown RBP2.29□□□□□ -2.04
CPNE3-201ENST00000517354 PLCE1Q9P212 2302 aa2.29□□□□□ -2.04
CPNE3-201ENST00000517354 TRAV2A0A0B4J234 112 aa2.28□□□□□ -2.04
CPNE3-201ENST00000517354 POLR2JP52435 117 aaKnown RBP2.28□□□□□ -2.04
CPNE3-201ENST00000517354 CCL8P80075 99 aa2.28□□□□□ -2.04
CPNE3-201ENST00000517354 SPCS1Q9Y6A9 102 aa2.28□□□□□ -2.04
CPNE3-201ENST00000517354 ARFGEF3Q5TH69 2177 aa2.27□□□□□ -2.05
CPNE3-201ENST00000517354 RYR1P21817 5038 aa2.27□□□□□ -2.05
CPNE3-201ENST00000517354 LOC110117498A0A087WWA1 95 aa2.27□□□□□ -2.05
CPNE3-201ENST00000517354 TRBV6-7A0A0A0MS04 114 aa2.27□□□□□ -2.05
CPNE3-201ENST00000517354 CRYM-AS1A6NIL9 109 aa2.27□□□□□ -2.05
CPNE3-201ENST00000517354 HCG22E2RYF7 251 aa2.27□□□□□ -2.05
CPNE3-201ENST00000517354 DNAL4O96015 105 aa2.27□□□□□ -2.05
CPNE3-201ENST00000517354 MYOZ3Q8TDC0 251 aa2.27□□□□□ -2.05
CPNE3-201ENST00000517354 PPDPFLQ8WWR9 84 aa2.27□□□□□ -2.05
CPNE3-201ENST00000517354 BPESC1Q9GZL8 116 aa2.27□□□□□ -2.05
CPNE3-201ENST00000517354 WNK2Q9Y3S1 2297 aa2.26□□□□□ -2.05
CPNE3-201ENST00000517354 TENM2Q9NT68 2774 aa2.26□□□□□ -2.05
CPNE3-201ENST00000517354 TRAV13-2A0A0B4J235 113 aa2.26□□□□□ -2.05
CPNE3-201ENST00000517354 PIGBOS1A0A0B4J2F0 54 aa2.26□□□□□ -2.05
CPNE3-201ENST00000517354 TRBV10-3A0A0K0K1G6 114 aa2.26□□□□□ -2.05
CPNE3-201ENST00000517354 NAP1L6A6NFF2 107 aa2.26□□□□□ -2.05
CPNE3-201ENST00000517354 A6NIN4 97 aa2.26□□□□□ -2.05
CPNE3-201ENST00000517354 M0R2N4 97 aa2.26□□□□□ -2.05
CPNE3-201ENST00000517354 CCL22O00626 93 aa2.26□□□□□ -2.05
CPNE3-201ENST00000517354 INE1O15225 51 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms