RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 M0R378 163 aa3.45□□□□□ -1.86
SCARNA16.4-201ENST00000516956 DLEU1O43261 78 aa3.45□□□□□ -1.86
SCARNA16.4-201ENST00000516956 SMIM6P0DI80 62 aa3.45□□□□□ -1.86
SCARNA16.4-201ENST00000516956 XGP55808 180 aa3.45□□□□□ -1.86
SCARNA16.4-201ENST00000516956 RPL37AP61513 92 aaKnown RBP3.45□□□□□ -1.86
SCARNA16.4-201ENST00000516956 PHF5AQ7RTV0 110 aaKnown RBP3.45□□□□□ -1.86
SCARNA16.4-201ENST00000516956 MRPL55Q7Z7F7 128 aaKnown RBP3.45□□□□□ -1.86
SCARNA16.4-201ENST00000516956 LINC00518Q8N0U6 118 aa3.45□□□□□ -1.86
SCARNA16.4-201ENST00000516956 LINC00308Q8TCZ7 52 aa3.45□□□□□ -1.86
SCARNA16.4-201ENST00000516956 TP73-AS1Q9UF72 201 aa3.45□□□□□ -1.86
SCARNA16.4-201ENST00000516956 RYR2Q92736 4967 aa3.45□□□□□ -1.86
SCARNA16.4-201ENST00000516956 NCR3O14931 201 aa3.44□□□□□ -1.86
SCARNA16.4-201ENST00000516956 HINT1P49773 126 aaPredicted RBP3.44□□□□□ -1.86
SCARNA16.4-201ENST00000516956 ADAMTSL4-AS1Q5T5F5 129 aa3.44□□□□□ -1.86
SCARNA16.4-201ENST00000516956 SPANXDQ9BXN6 97 aa3.44□□□□□ -1.86
SCARNA16.4-201ENST00000516956 SPANXB1Q9NS25 103 aaPredicted RBP3.44□□□□□ -1.86
SCARNA16.4-201ENST00000516956 SPANXCQ9NY87 97 aa3.44□□□□□ -1.86
SCARNA16.4-201ENST00000516956 UQCR10Q9UDW1 63 aa3.44□□□□□ -1.86
SCARNA16.4-201ENST00000516956 DNAH6Q9C0G6 4158 aa3.44□□□□□ -1.86
SCARNA16.4-201ENST00000516956 IGLV5-37A0A075B6J1 123 aa3.43□□□□□ -1.86
SCARNA16.4-201ENST00000516956 TMEM238LA0A1B0GVL6 79 aa3.43□□□□□ -1.86
SCARNA16.4-201ENST00000516956 A6NDN8 102 aa3.43□□□□□ -1.86
SCARNA16.4-201ENST00000516956 A6NJY4 79 aa3.43□□□□□ -1.86
SCARNA16.4-201ENST00000516956 RPL37AP8A6NKH3 93 aa3.43□□□□□ -1.86
SCARNA16.4-201ENST00000516956 TSTD3H0UI37 97 aa3.43□□□□□ -1.86
SCARNA16.4-201ENST00000516956 NDUFC2O95298 119 aa3.43□□□□□ -1.86
SCARNA16.4-201ENST00000516956 VPREB1P12018 145 aa3.43□□□□□ -1.86
SCARNA16.4-201ENST00000516956 HNRNPA3P51991 378 aaKnown RBP3.43□□□□□ -1.86
SCARNA16.4-201ENST00000516956 C1orf137Q5JT78 98 aa3.43□□□□□ -1.86
SCARNA16.4-201ENST00000516956 SERTAD4-AS1Q5TG53 156 aa3.43□□□□□ -1.86
SCARNA16.4-201ENST00000516956 MUSTN1Q8IVN3 82 aa3.43□□□□□ -1.86
SCARNA16.4-201ENST00000516956 LINC00167Q96N53 147 aa3.43□□□□□ -1.86
SCARNA16.4-201ENST00000516956 IGKV2-28A0A075B6P5 120 aa3.42□□□□□ -1.86
SCARNA16.4-201ENST00000516956 TRAV13-2A0A0B4J235 113 aa3.42□□□□□ -1.86
SCARNA16.4-201ENST00000516956 TRBV10-2A0A0K0K1G8 114 aa3.42□□□□□ -1.86
SCARNA16.4-201ENST00000516956 LOC105371267A0A1B0GV96 52 aa3.42□□□□□ -1.86
SCARNA16.4-201ENST00000516956 ETDCA0A1B0GVM5 59 aa3.42□□□□□ -1.86
SCARNA16.4-201ENST00000516956 IGKV2D-28P01615 120 aa3.42□□□□□ -1.86
SCARNA16.4-201ENST00000516956 DDTP30046 118 aa3.42□□□□□ -1.86
SCARNA16.4-201ENST00000516956 UBE2AP49459 152 aa3.42□□□□□ -1.86
SCARNA16.4-201ENST00000516956 PRR3P79522 188 aaKnown RBP3.42□□□□□ -1.86
SCARNA16.4-201ENST00000516956 TAL2Q16559 108 aa3.42□□□□□ -1.86
SCARNA16.4-201ENST00000516956 Q5VSD8 79 aa3.42□□□□□ -1.86
SCARNA16.4-201ENST00000516956 Q8N1X5 172 aa3.42□□□□□ -1.86
SCARNA16.4-201ENST00000516956 RAB37Q96AX2 223 aa3.42□□□□□ -1.86
SCARNA16.4-201ENST00000516956 C12orf57Q99622 126 aa3.42□□□□□ -1.86
SCARNA16.4-201ENST00000516956 HIGD1BQ9P298 99 aa3.42□□□□□ -1.86
SCARNA16.4-201ENST00000516956 SACSQ9NZJ4 4579 aa3.42□□□□□ -1.86
SCARNA16.4-201ENST00000516956 RYR3Q15413 4870 aa3.42□□□□□ -1.86
SCARNA16.4-201ENST00000516956 HYDINQ4G0P3 5121 aa3.41□□□□□ -1.86
SCARNA16.4-201ENST00000516956 LOC107984156A0A0G2JMH3 177 aa3.41□□□□□ -1.86
SCARNA16.4-201ENST00000516956 RPL28P46779 137 aaKnown RBP3.41□□□□□ -1.86
SCARNA16.4-201ENST00000516956 REG3GQ6UW15 175 aa3.41□□□□□ -1.86
SCARNA16.4-201ENST00000516956 ARL17AQ8IVW1 177 aa3.41□□□□□ -1.86
SCARNA16.4-201ENST00000516956 LITAFQ99732 161 aa3.41□□□□□ -1.86
SCARNA16.4-201ENST00000516956 TMEM126AQ9H061 195 aa3.41□□□□□ -1.86
SCARNA16.4-201ENST00000516956 PRO1933Q9H354 126 aa3.41□□□□□ -1.86
SCARNA16.4-201ENST00000516956 PPDPFQ9H3Y8 114 aa3.41□□□□□ -1.86
SCARNA16.4-201ENST00000516956 PSORS1C2Q9UIG4 136 aa3.41□□□□□ -1.86
SCARNA16.4-201ENST00000516956 IGLV1-50A0A075B6I6 118 aa3.4□□□□□ -1.87
SCARNA16.4-201ENST00000516956 TRAV23DV6A0A075B6W5 121 aa3.4□□□□□ -1.87
SCARNA16.4-201ENST00000516956 TRBV10-3A0A0K0K1G6 114 aa3.4□□□□□ -1.87
SCARNA16.4-201ENST00000516956 A4D1N5 150 aa3.4□□□□□ -1.87
SCARNA16.4-201ENST00000516956 PRYO14603 147 aa3.4□□□□□ -1.87
SCARNA16.4-201ENST00000516956 HSD52Q0P140 79 aa3.4□□□□□ -1.87
SCARNA16.4-201ENST00000516956 VAMP3Q15836 100 aa3.4□□□□□ -1.87
SCARNA16.4-201ENST00000516956 Q1RN00 199 aa3.4□□□□□ -1.87
SCARNA16.4-201ENST00000516956 SOSTDC1Q6X4U4 206 aa3.4□□□□□ -1.87
SCARNA16.4-201ENST00000516956 FAM19A1Q7Z5A9 133 aa3.4□□□□□ -1.87
SCARNA16.4-201ENST00000516956 DNAH17Q9UFH2 4485 aa3.39□□□□□ -1.87
SCARNA16.4-201ENST00000516956 M0R143 59 aa3.39□□□□□ -1.87
SCARNA16.4-201ENST00000516956 BCE1O60756 84 aa3.39□□□□□ -1.87
SCARNA16.4-201ENST00000516956 SNCGO76070 127 aa3.39□□□□□ -1.87
SCARNA16.4-201ENST00000516956 INAFM2P0DMQ5 153 aa3.39□□□□□ -1.87
SCARNA16.4-201ENST00000516956 CEND1Q8N111 149 aa3.39□□□□□ -1.87
SCARNA16.4-201ENST00000516956 DIRC1Q969H9 104 aa3.39□□□□□ -1.87
SCARNA16.4-201ENST00000516956 FRAS1Q86XX4 4008 aa3.39□□□□□ -1.87
SCARNA16.4-201ENST00000516956 DNAH2Q9P225 4427 aa3.39□□□□□ -1.87
SCARNA16.4-201ENST00000516956 DNAH10Q8IVF4 4471 aa3.39□□□□□ -1.87
SCARNA16.4-201ENST00000516956 HECTD4Q9Y4D8 3996 aa3.38□□□□□ -1.87
SCARNA16.4-201ENST00000516956 PKD1P98161 4303 aa3.38□□□□□ -1.87
SCARNA16.4-201ENST00000516956 H7C2G1 150 aa3.38□□□□□ -1.87
SCARNA16.4-201ENST00000516956 SLC25A20O43772 301 aa3.38□□□□□ -1.87
SCARNA16.4-201ENST00000516956 ZNF73O43830 326 aaPredicted RBP3.38□□□□□ -1.87
SCARNA16.4-201ENST00000516956 IGLV6-57P01721 117 aa3.38□□□□□ -1.87
SCARNA16.4-201ENST00000516956 IGLV7-43P04211 117 aa3.38□□□□□ -1.87
SCARNA16.4-201ENST00000516956 RPL13AP40429 203 aaKnown RBP3.38□□□□□ -1.87
SCARNA16.4-201ENST00000516956 SPINK6Q6UWN8 80 aa3.38□□□□□ -1.87
SCARNA16.4-201ENST00000516956 C2orf91Q6ZV80 131 aa3.38□□□□□ -1.87
SCARNA16.4-201ENST00000516956 KRTAP7-1Q8IUC3 87 aa3.38□□□□□ -1.87
SCARNA16.4-201ENST00000516956 KCNQ1DNQ9H478 68 aa3.38□□□□□ -1.87
SCARNA16.4-201ENST00000516956 ZNF861PO60384 105 aa3.37□□□□□ -1.87
SCARNA16.4-201ENST00000516956 EIF4EBP3O60516 100 aaPredicted RBP3.37□□□□□ -1.87
SCARNA16.4-201ENST00000516956 COX7BP24311 80 aa3.37□□□□□ -1.87
SCARNA16.4-201ENST00000516956 PSMB2P49721 201 aa3.37□□□□□ -1.87
SCARNA16.4-201ENST00000516956 LINC00337Q8N6G1 96 aa3.37□□□□□ -1.87
SCARNA16.4-201ENST00000516956 Q8NDZ9 215 aa3.37□□□□□ -1.87
SCARNA16.4-201ENST00000516956 HIGD2AQ9BW72 106 aa3.37□□□□□ -1.87
SCARNA16.4-201ENST00000516956 NHP2Q9NX24 153 aaKnown RBP3.37□□□□□ -1.87
SCARNA16.4-201ENST00000516956 ZNF706Q9Y5V0 76 aaPredicted RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms