RNA–Protein interactions for RNA: ENST00000515982.1

SCARNA6-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 265 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6-201ENST00000515982 IFITM1P13164 125 aa4.49□□□□□ -1.69
SCARNA6-201ENST00000515982 SRSF9Q13242 221 aaKnown RBP eCLIP4.49□□□□□ -1.69
SCARNA6-201ENST00000515982 ADAMTSL4-AS1Q5T5F5 129 aa4.49□□□□□ -1.69
SCARNA6-201ENST00000515982 ARL17AQ8IVW1 177 aa4.49□□□□□ -1.69
SCARNA6-201ENST00000515982 SPANXDQ9BXN6 97 aa4.49□□□□□ -1.69
SCARNA6-201ENST00000515982 SPANXCQ9NY87 97 aa4.49□□□□□ -1.69
SCARNA6-201ENST00000515982 PLAC8Q9NZF1 115 aa4.49□□□□□ -1.69
SCARNA6-201ENST00000515982 A0A1W2PNN7 141 aa4.48□□□□□ -1.69
SCARNA6-201ENST00000515982 EPM2AB3EWF7 344 aa4.48□□□□□ -1.69
SCARNA6-201ENST00000515982 CDK2AP2O75956 126 aa4.48□□□□□ -1.69
SCARNA6-201ENST00000515982 CTAG1AP78358 180 aa4.48□□□□□ -1.69
SCARNA6-201ENST00000515982 LBHQ53QV2 105 aaPredicted RBP4.48□□□□□ -1.69
SCARNA6-201ENST00000515982 C9orf129Q5T035 196 aaKnown RBP4.48□□□□□ -1.69
SCARNA6-201ENST00000515982 LITAFQ99732 161 aa4.48□□□□□ -1.69
SCARNA6-201ENST00000515982 PPDPFQ9H3Y8 114 aa4.48□□□□□ -1.69
SCARNA6-201ENST00000515982 SPANXB1Q9NS25 103 aaPredicted RBP4.48□□□□□ -1.69
SCARNA6-201ENST00000515982 HIGD1BQ9P298 99 aa4.48□□□□□ -1.69
SCARNA6-201ENST00000515982 UQCR10Q9UDW1 63 aa4.48□□□□□ -1.69
SCARNA6-201ENST00000515982 PANO1I0J062 215 aa4.47□□□□□ -1.69
SCARNA6-201ENST00000515982 SCXQ7RTU7 201 aa4.47□□□□□ -1.69
SCARNA6-201ENST00000515982 DAND5Q8N907 189 aa4.47□□□□□ -1.69
SCARNA6-201ENST00000515982 NKAPP1Q8N9T2 125 aa4.47□□□□□ -1.69
SCARNA6-201ENST00000515982 CIRBP-AS1Q8TBR5 109 aa4.47□□□□□ -1.69
SCARNA6-201ENST00000515982 LINC00308Q8TCZ7 52 aa4.47□□□□□ -1.69
SCARNA6-201ENST00000515982 C12orf57Q99622 126 aa4.47□□□□□ -1.69
SCARNA6-201ENST00000515982 TP73-AS1Q9UF72 201 aa4.47□□□□□ -1.69
SCARNA6-201ENST00000515982 HSPG2P98160 4391 aa4.46□□□□□ -1.7
SCARNA6-201ENST00000515982 SRRM2Q9UQ35 2752 aaKnown RBP4.46□□□□□ -1.7
SCARNA6-201ENST00000515982 IGLV5-37A0A075B6J1 123 aa4.46□□□□□ -1.7
SCARNA6-201ENST00000515982 NDUFC2O95298 119 aa4.46□□□□□ -1.7
SCARNA6-201ENST00000515982 XGP55808 180 aa4.46□□□□□ -1.7
SCARNA6-201ENST00000515982 TAL2Q16559 108 aa4.46□□□□□ -1.7
SCARNA6-201ENST00000515982 FAM19A5Q7Z5A7 132 aaPredicted RBP4.46□□□□□ -1.7
SCARNA6-201ENST00000515982 HIST1H4GQ99525 98 aa4.46□□□□□ -1.7
SCARNA6-201ENST00000515982 C22orf24Q9Y442 160 aa4.46□□□□□ -1.7
SCARNA6-201ENST00000515982 FAM168BA1KXE4 195 aa4.45□□□□□ -1.7
SCARNA6-201ENST00000515982 M0QXV9 152 aa4.45□□□□□ -1.7
SCARNA6-201ENST00000515982 M0R378 163 aa4.45□□□□□ -1.7
SCARNA6-201ENST00000515982 VPREB1P12018 145 aa4.45□□□□□ -1.7
SCARNA6-201ENST00000515982 NPC2P61916 151 aa4.45□□□□□ -1.7
SCARNA6-201ENST00000515982 SERTAD4-AS1Q5TG53 156 aa4.45□□□□□ -1.7
SCARNA6-201ENST00000515982 MRPL55Q7Z7F7 128 aaKnown RBP4.45□□□□□ -1.7
SCARNA6-201ENST00000515982 MUSTN1Q8IVN3 82 aa4.45□□□□□ -1.7
SCARNA6-201ENST00000515982 LINC00518Q8N0U6 118 aa4.45□□□□□ -1.7
SCARNA6-201ENST00000515982 C7orf33Q8WU49 177 aa4.45□□□□□ -1.7
SCARNA6-201ENST00000515982 TRBV10-2A0A0K0K1G8 114 aa4.44□□□□□ -1.7
SCARNA6-201ENST00000515982 TSTD3H0UI37 97 aa4.44□□□□□ -1.7
SCARNA6-201ENST00000515982 SOSTDC1Q6X4U4 206 aa4.44□□□□□ -1.7
SCARNA6-201ENST00000515982 C2orf91Q6ZV80 131 aa4.44□□□□□ -1.7
SCARNA6-201ENST00000515982 PRO1933Q9H354 126 aa4.44□□□□□ -1.7
SCARNA6-201ENST00000515982 CBY1Q9Y3M2 126 aa4.44□□□□□ -1.7
SCARNA6-201ENST00000515982 DNAH5Q8TE73 4624 aa4.43□□□□□ -1.7
SCARNA6-201ENST00000515982 HNRNPA3P51991 378 aaKnown RBP4.43□□□□□ -1.7
SCARNA6-201ENST00000515982 UBE2BP63146 152 aa4.43□□□□□ -1.7
SCARNA6-201ENST00000515982 PRR3P79522 188 aaKnown RBP4.43□□□□□ -1.7
SCARNA6-201ENST00000515982 PHF5AQ7RTV0 110 aaKnown RBP4.43□□□□□ -1.7
SCARNA6-201ENST00000515982 KRTAP7-1Q8IUC3 87 aa4.43□□□□□ -1.7
SCARNA6-201ENST00000515982 Q8N1X5 172 aa4.43□□□□□ -1.7
SCARNA6-201ENST00000515982 LINC00167Q96N53 147 aa4.43□□□□□ -1.7
SCARNA6-201ENST00000515982 TMEM238LA0A1B0GVL6 79 aa4.42□□□□□ -1.7
SCARNA6-201ENST00000515982 A6NJY4 79 aa4.42□□□□□ -1.7
SCARNA6-201ENST00000515982 FAM229AH3BQW9 127 aa4.42□□□□□ -1.7
SCARNA6-201ENST00000515982 EIF4EBP3O60516 100 aaPredicted RBP4.42□□□□□ -1.7
SCARNA6-201ENST00000515982 HAMPP81172 84 aa4.42□□□□□ -1.7
SCARNA6-201ENST00000515982 HSD52Q0P140 79 aa4.42□□□□□ -1.7
SCARNA6-201ENST00000515982 S100A7L2Q5SY68 101 aa4.42□□□□□ -1.7
SCARNA6-201ENST00000515982 CEND1Q8N111 149 aa4.42□□□□□ -1.7
SCARNA6-201ENST00000515982 FLG2Q5D862 2391 aaPredicted RBP4.42□□□□□ -1.7
SCARNA6-201ENST00000515982 IGLV1-50A0A075B6I6 118 aa4.41□□□□□ -1.7
SCARNA6-201ENST00000515982 TRAV13-2A0A0B4J235 113 aa4.41□□□□□ -1.7
SCARNA6-201ENST00000515982 A4D1N5 150 aa4.41□□□□□ -1.7
SCARNA6-201ENST00000515982 GAGE10A6NGK3 116 aa4.41□□□□□ -1.7
SCARNA6-201ENST00000515982 NCR3O14931 201 aa4.41□□□□□ -1.7
SCARNA6-201ENST00000515982 SMR3BP02814 79 aaPredicted RBP4.41□□□□□ -1.7
SCARNA6-201ENST00000515982 Q8NDZ9 215 aa4.41□□□□□ -1.7
SCARNA6-201ENST00000515982 OR13C6PQ8NH95 151 aa4.41□□□□□ -1.7
SCARNA6-201ENST00000515982 TMEM126AQ9H061 195 aa4.41□□□□□ -1.7
SCARNA6-201ENST00000515982 UBR4Q5T4S7 5183 aa4.41□□□□□ -1.7
SCARNA6-201ENST00000515982 APOBP04114 4563 aaKnown RBP4.41□□□□□ -1.7
SCARNA6-201ENST00000515982 DNAH8Q96JB1 4490 aa4.4□□□□□ -1.7
SCARNA6-201ENST00000515982 LRP1BQ9NZR2 4599 aa4.4□□□□□ -1.7
SCARNA6-201ENST00000515982 IGKV2-28A0A075B6P5 120 aa4.4□□□□□ -1.71
SCARNA6-201ENST00000515982 A6NDN8 102 aa4.4□□□□□ -1.71
SCARNA6-201ENST00000515982 RPL37AP8A6NKH3 93 aa4.4□□□□□ -1.71
SCARNA6-201ENST00000515982 IGKV2D-28P01615 120 aa4.4□□□□□ -1.71
SCARNA6-201ENST00000515982 PLA2G1BP04054 148 aaKnown RBP4.4□□□□□ -1.71
SCARNA6-201ENST00000515982 DDTP30046 118 aa4.4□□□□□ -1.71
SCARNA6-201ENST00000515982 LINC00528Q8N1L1 170 aa4.4□□□□□ -1.71
SCARNA6-201ENST00000515982 TRBV10-3A0A0K0K1G6 114 aa4.39□□□□□ -1.71
SCARNA6-201ENST00000515982 PRYO14603 147 aa4.39□□□□□ -1.71
SCARNA6-201ENST00000515982 IGLV6-57P01721 117 aa4.39□□□□□ -1.71
SCARNA6-201ENST00000515982 RPL37AP61513 92 aaKnown RBP4.39□□□□□ -1.71
SCARNA6-201ENST00000515982 RAB37Q96AX2 223 aa4.39□□□□□ -1.71
SCARNA6-201ENST00000515982 KCNQ1DNQ9H478 68 aa4.39□□□□□ -1.71
SCARNA6-201ENST00000515982 PSORS1C2Q9UIG4 136 aa4.39□□□□□ -1.71
SCARNA6-201ENST00000515982 A0A0B4J2C4 111 aa4.38□□□□□ -1.71
SCARNA6-201ENST00000515982 M0R143 59 aa4.38□□□□□ -1.71
SCARNA6-201ENST00000515982 HINT1P49773 126 aaPredicted RBP4.38□□□□□ -1.71
SCARNA6-201ENST00000515982 C1orf137Q5JT78 98 aa4.38□□□□□ -1.71
SCARNA6-201ENST00000515982 REG3GQ6UW15 175 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms