RNA–Protein interactions for RNA: ENST00000515792.5

RPS3A-213, Transcript of ribosomal protein S3A, humanhuman

TSL 3

Gene RPS3A, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-213ENST00000515792 PPRC1Q5VV67 1664 aaKnown RBP0.35□□□□□ -2.35
RPS3A-213ENST00000515792 LEPROTL1O95214 131 aa0.35□□□□□ -2.35
RPS3A-213ENST00000515792 CYB5AP00167 134 aa0.35□□□□□ -2.35
RPS3A-213ENST00000515792 COX6B1P14854 86 aa0.35□□□□□ -2.35
RPS3A-213ENST00000515792 CHD6Q8TD26 2715 aa0.35□□□□□ -2.35
RPS3A-213ENST00000515792 FSIP2Q5CZC0 6907 aa0.35□□□□□ -2.35
RPS3A-213ENST00000515792 PTPN23Q9H3S7 1636 aa0.35□□□□□ -2.35
RPS3A-213ENST00000515792 COL14A1Q05707 1796 aaKnown RBP0.34□□□□□ -2.35
RPS3A-213ENST00000515792 DCAF1Q9Y4B6 1507 aa0.34□□□□□ -2.35
RPS3A-213ENST00000515792 PHGR1C9JFL3 82 aa0.34□□□□□ -2.36
RPS3A-213ENST00000515792 K7EQZ3 153 aa0.34□□□□□ -2.36
RPS3A-213ENST00000515792 IGLC3P0DOY3 106 aa0.34□□□□□ -2.36
RPS3A-213ENST00000515792 ANK2Q01484 3957 aa0.34□□□□□ -2.36
RPS3A-213ENST00000515792 DEFB107AQ8IZN7 70 aa0.34□□□□□ -2.36
RPS3A-213ENST00000515792 FDCSPQ8NFU4 85 aa0.34□□□□□ -2.36
RPS3A-213ENST00000515792 CFAP74Q9C0B2 1584 aa0.34□□□□□ -2.36
RPS3A-213ENST00000515792 SPTA1P02549 2419 aa0.34□□□□□ -2.36
RPS3A-213ENST00000515792 MAP3K1Q13233 1512 aa0.33□□□□□ -2.36
RPS3A-213ENST00000515792 KDM5DQ9BY66 1539 aa0.33□□□□□ -2.36
RPS3A-213ENST00000515792 TENM4Q6N022 2769 aa0.33□□□□□ -2.36
RPS3A-213ENST00000515792 RGPD8O14715 1765 aaPredicted RBP0.33□□□□□ -2.36
RPS3A-213ENST00000515792 RGPD5Q99666 1765 aa0.33□□□□□ -2.36
RPS3A-213ENST00000515792 SCN11AQ9UI33 1791 aa0.33□□□□□ -2.36
RPS3A-213ENST00000515792 KANTRA0A1W2PQU2 76 aa0.33□□□□□ -2.36
RPS3A-213ENST00000515792 GNGT1P63211 74 aa0.33□□□□□ -2.36
RPS3A-213ENST00000515792 PLGLAQ15195 96 aa0.33□□□□□ -2.36
RPS3A-213ENST00000515792 NKTRP30414 1462 aaKnown RBP0.33□□□□□ -2.36
RPS3A-213ENST00000515792 PTPN13Q12923 2485 aa0.32□□□□□ -2.36
RPS3A-213ENST00000515792 DIP2BQ9P265 1576 aa0.32□□□□□ -2.36
RPS3A-213ENST00000515792 LTN1O94822 1766 aa0.32□□□□□ -2.36
RPS3A-213ENST00000515792 NCOR2Q9Y618 2525 aa0.32□□□□□ -2.36
RPS3A-213ENST00000515792 CNOT1A5YKK6 2376 aaKnown RBP0.32□□□□□ -2.36
RPS3A-213ENST00000515792 MAST4O15021 2626 aa0.32□□□□□ -2.36
RPS3A-213ENST00000515792 MYMXA0A1B0GTQ4 84 aa0.32□□□□□ -2.36
RPS3A-213ENST00000515792 SPINK1P00995 79 aa0.32□□□□□ -2.36
RPS3A-213ENST00000515792 COX8AP10176 69 aa0.32□□□□□ -2.36
RPS3A-213ENST00000515792 TDRG1Q3Y452 100 aa0.32□□□□□ -2.36
RPS3A-213ENST00000515792 S100A13Q99584 98 aa0.32□□□□□ -2.36
RPS3A-213ENST00000515792 ERVK-7P63135 1459 aa0.32□□□□□ -2.36
RPS3A-213ENST00000515792 UBR3Q6ZT12 1888 aa0.32□□□□□ -2.36
RPS3A-213ENST00000515792 RGPD1P0DJD0 1748 aa0.32□□□□□ -2.36
RPS3A-213ENST00000515792 ABCC1P33527 1531 aa0.32□□□□□ -2.36
RPS3A-213ENST00000515792 MAGI3Q5TCQ9 1506 aa0.32□□□□□ -2.36
RPS3A-213ENST00000515792 RGPD2P0DJD1 1756 aa0.32□□□□□ -2.36
RPS3A-213ENST00000515792 CEP170BQ9Y4F5 1589 aaPredicted RBP0.32□□□□□ -2.36
RPS3A-213ENST00000515792 RRBP1Q9P2E9 1410 aaKnown RBP0.31□□□□□ -2.36
RPS3A-213ENST00000515792 CCDC88BA6NC98 1476 aa0.31□□□□□ -2.36
RPS3A-213ENST00000515792 ATRQ13535 2644 aa0.31□□□□□ -2.36
RPS3A-213ENST00000515792 FXYD6-FXYD2A0A087WZ82 144 aa0.31□□□□□ -2.36
RPS3A-213ENST00000515792 ST20Q9HBF5 79 aa0.31□□□□□ -2.36
RPS3A-213ENST00000515792 WNK2Q9Y3S1 2297 aa0.31□□□□□ -2.36
RPS3A-213ENST00000515792 HIVEP3Q5T1R4 2406 aa0.3□□□□□ -2.36
RPS3A-213ENST00000515792 CSMD3Q7Z407 3707 aa0.3□□□□□ -2.36
RPS3A-213ENST00000515792 POLR1AO95602 1720 aaPredicted RBP0.3□□□□□ -2.36
RPS3A-213ENST00000515792 FMN2Q9NZ56 1722 aa0.3□□□□□ -2.36
RPS3A-213ENST00000515792 BCORQ6W2J9 1755 aa0.3□□□□□ -2.36
RPS3A-213ENST00000515792 URB2Q14146 1524 aaKnown RBP0.3□□□□□ -2.36
RPS3A-213ENST00000515792 A0A1B0GUT8 65 aa0.3□□□□□ -2.36
RPS3A-213ENST00000515792 IQCF6A8MYZ5 107 aa0.3□□□□□ -2.36
RPS3A-213ENST00000515792 IGLC2P0DOY2 106 aa0.3□□□□□ -2.36
RPS3A-213ENST00000515792 HMGA1P17096 107 aaKnown RBP0.3□□□□□ -2.36
RPS3A-213ENST00000515792 SPRR1AP35321 89 aa0.3□□□□□ -2.36
RPS3A-213ENST00000515792 ABCA2Q9BZC7 2435 aa0.3□□□□□ -2.36
RPS3A-213ENST00000515792 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.3□□□□□ -2.364e-7■■■■■ 38.3
RPS3A-213ENST00000515792 NCOA2Q15596 1464 aa0.29□□□□□ -2.36
RPS3A-213ENST00000515792 SYNE1Q8NF91 8797 aaKnown RBP0.29□□□□□ -2.36
RPS3A-213ENST00000515792 DEFB121Q5J5C9 76 aa0.29□□□□□ -2.36
RPS3A-213ENST00000515792 U3KQA8 63 aa0.29□□□□□ -2.36
RPS3A-213ENST00000515792 UBR5O95071 2799 aaPredicted RBP0.29□□□□□ -2.36
RPS3A-213ENST00000515792 CLIP1P30622 1438 aa0.29□□□□□ -2.36
RPS3A-213ENST00000515792 PKD1L1Q8TDX9 2849 aa0.28□□□□□ -2.36
RPS3A-213ENST00000515792 PREX1Q8TCU6 1659 aa0.28□□□□□ -2.36
RPS3A-213ENST00000515792 CEBPZOSA8MTT3 80 aa0.28□□□□□ -2.36
RPS3A-213ENST00000515792 NDUFB1O75438 58 aa0.28□□□□□ -2.36
RPS3A-213ENST00000515792 SPRR1BP22528 89 aa0.28□□□□□ -2.36
RPS3A-213ENST00000515792 ADIRFQ15847 76 aa0.28□□□□□ -2.36
RPS3A-213ENST00000515792 CRIPTQ9P021 101 aa0.28□□□□□ -2.36
RPS3A-213ENST00000515792 CSPG4Q6UVK1 2322 aa0.28□□□□□ -2.36
RPS3A-213ENST00000515792 PIK3C2BO00750 1634 aa0.27□□□□□ -2.37
RPS3A-213ENST00000515792 CCL22O00626 93 aa0.27□□□□□ -2.37
RPS3A-213ENST00000515792 DEFB109BQ30KR1 87 aa0.27□□□□□ -2.37
RPS3A-213ENST00000515792 LRRC7Q96NW7 1537 aa0.27□□□□□ -2.37
RPS3A-213ENST00000515792 HRNRQ86YZ3 2850 aaPredicted RBP0.27□□□□□ -2.37
RPS3A-213ENST00000515792 ARFGEF2Q9Y6D5 1785 aa0.27□□□□□ -2.37
RPS3A-213ENST00000515792 CHD8Q9HCK8 2581 aa0.26□□□□□ -2.37
RPS3A-213ENST00000515792 I3L3M4 83 aa0.26□□□□□ -2.37
RPS3A-213ENST00000515792 SPINK4O60575 86 aa0.26□□□□□ -2.37
RPS3A-213ENST00000515792 CFDP00746 253 aaPredicted RBP0.26□□□□□ -2.37
RPS3A-213ENST00000515792 COX7BP24311 80 aa0.26□□□□□ -2.37
RPS3A-213ENST00000515792 DEFB112Q30KQ8 113 aa0.26□□□□□ -2.37
RPS3A-213ENST00000515792 ATP5EP2Q5VTU8 51 aa0.26□□□□□ -2.37
RPS3A-213ENST00000515792 COX6B2Q6YFQ2 88 aa0.26□□□□□ -2.37
RPS3A-213ENST00000515792 ABCA8O94911 1581 aa0.26□□□□□ -2.37
RPS3A-213ENST00000515792 USP32Q8NFA0 1604 aa0.26□□□□□ -2.37
RPS3A-213ENST00000515792 LRP1Q07954 4544 aaKnown RBP0.26□□□□□ -2.37
RPS3A-213ENST00000515792 ANKARQ7Z5J8 1434 aa0.25□□□□□ -2.37
RPS3A-213ENST00000515792 SPTY2D1-AS1A0A0U1RR47 76 aa0.25□□□□□ -2.37
RPS3A-213ENST00000515792 CPSF4LA6NMK7 179 aaKnown RBP0.25□□□□□ -2.37
RPS3A-213ENST00000515792 DSTQ03001 7570 aaKnown RBP0.25□□□□□ -2.37
RPS3A-213ENST00000515792 CELSR1Q9NYQ6 3014 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms