RNA–Protein interactions for RNA: ENST00000515609.1

TPM3-222, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-222ENST00000515609 M0R2N4 97 aa6.21□□□□□ -1.42
TPM3-222ENST00000515609 PLA2G2DQ9UNK4 145 aa6.21□□□□□ -1.42
TPM3-222ENST00000515609 M0R378 163 aa6.2□□□□□ -1.42
TPM3-222ENST00000515609 LECT2O14960 151 aa6.2□□□□□ -1.42
TPM3-222ENST00000515609 RPL18AQ02543 176 aaKnown RBP6.2□□□□□ -1.42
TPM3-222ENST00000515609 UBE2V1Q13404 147 aa6.2□□□□□ -1.42
TPM3-222ENST00000515609 Q6ZRN7 208 aaPredicted RBP6.2□□□□□ -1.42
TPM3-222ENST00000515609 NKAPP1Q8N9T2 125 aa6.2□□□□□ -1.42
TPM3-222ENST00000515609 K7EP34 96 aa6.19□□□□□ -1.42
TPM3-222ENST00000515609 RPL28P46779 137 aaKnown RBP6.19□□□□□ -1.42
TPM3-222ENST00000515609 ATXN8Q156A1 80 aa6.19□□□□□ -1.42
TPM3-222ENST00000515609 GAGE2EQ4V326 116 aa6.19□□□□□ -1.42
TPM3-222ENST00000515609 GAGE2DQ9UEU5 116 aa6.19□□□□□ -1.42
TPM3-222ENST00000515609 IGKV2-28A0A075B6P5 120 aa6.18□□□□□ -1.42
TPM3-222ENST00000515609 LRCOL1A6NCL2 159 aa6.18□□□□□ -1.42
TPM3-222ENST00000515609 C16orf90A8MZG2 172 aa6.18□□□□□ -1.42
TPM3-222ENST00000515609 EIF4EBP3O60516 100 aaPredicted RBP6.18□□□□□ -1.42
TPM3-222ENST00000515609 IGKV2D-28P01615 120 aa6.18□□□□□ -1.42
TPM3-222ENST00000515609 Q6ZRP5 223 aa6.18□□□□□ -1.42
TPM3-222ENST00000515609 LINC00337Q8N6G1 96 aa6.18□□□□□ -1.42
TPM3-222ENST00000515609 Q8N814 137 aa6.18□□□□□ -1.42
TPM3-222ENST00000515609 XAGE1AQ9HD64 81 aa6.18□□□□□ -1.42
TPM3-222ENST00000515609 DNAH9Q9NYC9 4486 aa6.17□□□□□ -1.42
TPM3-222ENST00000515609 A0A087WTM6 91 aa6.17□□□□□ -1.42
TPM3-222ENST00000515609 GHRHP01286 108 aa6.17□□□□□ -1.42
TPM3-222ENST00000515609 C9orf163Q8N9P6 203 aa6.17□□□□□ -1.42
TPM3-222ENST00000515609 F8W1H4 67 aa6.16□□□□□ -1.42
TPM3-222ENST00000515609 TRIAP1O43715 76 aa6.16□□□□□ -1.42
TPM3-222ENST00000515609 SLPIP03973 132 aa6.16□□□□□ -1.42
TPM3-222ENST00000515609 GAGE2BQ13066 116 aa6.16□□□□□ -1.42
TPM3-222ENST00000515609 NAA38Q9BRA0 125 aaKnown RBP6.16□□□□□ -1.42
TPM3-222ENST00000515609 IGLV5-37A0A075B6J1 123 aa6.15□□□□□ -1.42
TPM3-222ENST00000515609 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.15□□□□□ -1.42
TPM3-222ENST00000515609 A0A1B0GX51 115 aa6.15□□□□□ -1.42
TPM3-222ENST00000515609 NCR3O14931 201 aa6.15□□□□□ -1.42
TPM3-222ENST00000515609 IGLV6-57P01721 117 aa6.15□□□□□ -1.42
TPM3-222ENST00000515609 VPREB1P12018 145 aa6.15□□□□□ -1.42
TPM3-222ENST00000515609 SMIM11BQ8TCY0 68 aa6.15□□□□□ -1.42
TPM3-222ENST00000515609 TRBV7-6A0A0J9YX20 115 aa6.14□□□□□ -1.43
TPM3-222ENST00000515609 H3BQ85 93 aa6.14□□□□□ -1.43
TPM3-222ENST00000515609 SLC25A20O43772 301 aa6.14□□□□□ -1.43
TPM3-222ENST00000515609 DNAL4O96015 105 aa6.14□□□□□ -1.43
TPM3-222ENST00000515609 TRACP01848 142 aa6.13□□□□□ -1.43
TPM3-222ENST00000515609 WFDC2Q14508 124 aa6.13□□□□□ -1.43
TPM3-222ENST00000515609 DIRC1Q969H9 104 aa6.13□□□□□ -1.43
TPM3-222ENST00000515609 TRAV23DV6A0A075B6W5 121 aa6.12□□□□□ -1.43
TPM3-222ENST00000515609 H3BMG7 143 aa6.12□□□□□ -1.43
TPM3-222ENST00000515609 LST1O00453 97 aa6.12□□□□□ -1.43
TPM3-222ENST00000515609 PRR3P79522 188 aaKnown RBP6.12□□□□□ -1.43
TPM3-222ENST00000515609 C9orf129Q5T035 196 aaKnown RBP6.12□□□□□ -1.43
TPM3-222ENST00000515609 DPH3Q96FX2 82 aa6.12□□□□□ -1.43
TPM3-222ENST00000515609 IGLV5-52A0A0A0MRZ9 124 aa6.11□□□□□ -1.43
TPM3-222ENST00000515609 TRBV10-3A0A0K0K1G6 114 aa6.11□□□□□ -1.43
TPM3-222ENST00000515609 LCE6AA0A183 80 aa6.11□□□□□ -1.43
TPM3-222ENST00000515609 TCL1BO95988 128 aa6.11□□□□□ -1.43
TPM3-222ENST00000515609 LINC00336Q6ZUF6 198 aa6.11□□□□□ -1.43
TPM3-222ENST00000515609 MRPL55Q7Z7F7 128 aaKnown RBP6.11□□□□□ -1.43
TPM3-222ENST00000515609 M0QXV9 152 aa6.1□□□□□ -1.43
TPM3-222ENST00000515609 PRYO14603 147 aa6.1□□□□□ -1.43
TPM3-222ENST00000515609 RTL8CO15255 209 aa6.1□□□□□ -1.43
TPM3-222ENST00000515609 ZNF73O43830 326 aaPredicted RBP6.1□□□□□ -1.43
TPM3-222ENST00000515609 LINC01620Q4KN68 170 aa6.1□□□□□ -1.43
TPM3-222ENST00000515609 C6orf99Q4VX62 202 aa6.1□□□□□ -1.43
TPM3-222ENST00000515609 SDIM1Q6ZPB5 146 aa6.1□□□□□ -1.43
TPM3-222ENST00000515609 TENM2Q9NT68 2774 aa6.1□□□□□ -1.43
TPM3-222ENST00000515609 PRKDCP78527 4128 aaKnown RBP6.1□□□□□ -1.43
TPM3-222ENST00000515609 A0A096LNI7 61 aa6.09□□□□□ -1.43
TPM3-222ENST00000515609 IGKV2-24A0A0C4DH68 120 aa6.09□□□□□ -1.43
TPM3-222ENST00000515609 C9JAW5 83 aa6.09□□□□□ -1.43
TPM3-222ENST00000515609 H3BT86 120 aa6.09□□□□□ -1.43
TPM3-222ENST00000515609 KCNQ1DNQ9H478 68 aa6.09□□□□□ -1.43
TPM3-222ENST00000515609 C22orf24Q9Y442 160 aa6.09□□□□□ -1.43
TPM3-222ENST00000515609 INAFM2P0DMQ5 153 aa6.08□□□□□ -1.44
TPM3-222ENST00000515609 COX7BP24311 80 aa6.08□□□□□ -1.44
TPM3-222ENST00000515609 OCIAD2Q56VL3 154 aa6.08□□□□□ -1.44
TPM3-222ENST00000515609 FAM19A5Q7Z5A7 132 aaPredicted RBP6.08□□□□□ -1.44
TPM3-222ENST00000515609 C7orf33Q8WU49 177 aa6.08□□□□□ -1.44
TPM3-222ENST00000515609 IGLV1-50A0A075B6I6 118 aa6.07□□□□□ -1.44
TPM3-222ENST00000515609 J3QR89 54 aa6.07□□□□□ -1.44
TPM3-222ENST00000515609 SERTAD4-AS1Q5TG53 156 aa6.07□□□□□ -1.44
TPM3-222ENST00000515609 CLEC2BQ92478 149 aa6.07□□□□□ -1.44
TPM3-222ENST00000515609 TGP01266 2768 aa6.06□□□□□ -1.44
TPM3-222ENST00000515609 ETDCA0A1B0GVM5 59 aa6.06□□□□□ -1.44
TPM3-222ENST00000515609 hADV29S1A0JD25 119 aa6.06□□□□□ -1.44
TPM3-222ENST00000515609 ANKRD29Q8N6D5 301 aa6.06□□□□□ -1.44
TPM3-222ENST00000515609 Q8NDZ9 215 aa6.06□□□□□ -1.44
TPM3-222ENST00000515609 LINC01600Q96MT4 127 aa6.06□□□□□ -1.44
TPM3-222ENST00000515609 LINC00167Q96N53 147 aa6.06□□□□□ -1.44
TPM3-222ENST00000515609 DHRS4-AS1Q9P1J3 65 aa6.06□□□□□ -1.44
TPM3-222ENST00000515609 ELOF1P60002 83 aaKnown RBP6.05□□□□□ -1.44
TPM3-222ENST00000515609 UBE2BP63146 152 aa6.05□□□□□ -1.44
TPM3-222ENST00000515609 TNP2Q05952 138 aa6.05□□□□□ -1.44
TPM3-222ENST00000515609 LINC00575Q6W349 94 aa6.05□□□□□ -1.44
TPM3-222ENST00000515609 ORMDL1Q9P0S3 153 aa6.05□□□□□ -1.44
TPM3-222ENST00000515609 TMEM256-PLSCR3K7ERE1 68 aa6.04□□□□□ -1.44
TPM3-222ENST00000515609 REG3GQ6UW15 175 aa6.04□□□□□ -1.44
TPM3-222ENST00000515609 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.04□□□□□ -1.44
TPM3-222ENST00000515609 SPACA4Q8TDM5 124 aa6.04□□□□□ -1.44
TPM3-222ENST00000515609 FAM168BA1KXE4 195 aa6.03□□□□□ -1.44
TPM3-222ENST00000515609 K7ERU9 68 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms