RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 HIST1H2BJP06899 126 aa7.75□□□□□ -1.17
CLCN3-210ENST00000515420 HIST1H2BOP23527 126 aa7.75□□□□□ -1.17
CLCN3-210ENST00000515420 HIST1H2BBP33778 126 aa7.75□□□□□ -1.17
CLCN3-210ENST00000515420 HIST1H2BDP58876 126 aa7.75□□□□□ -1.17
CLCN3-210ENST00000515420 HIST1H2BCP62807 126 aa7.75□□□□□ -1.17
CLCN3-210ENST00000515420 HIST2H2BEQ16778 126 aa7.75□□□□□ -1.17
CLCN3-210ENST00000515420 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.75□□□□□ -1.17
CLCN3-210ENST00000515420 HIST1H2BHQ93079 126 aa7.75□□□□□ -1.17
CLCN3-210ENST00000515420 LINC00167Q96N53 147 aa7.75□□□□□ -1.17
CLCN3-210ENST00000515420 HIST1H2BNQ99877 126 aa7.75□□□□□ -1.17
CLCN3-210ENST00000515420 HIST1H2BMQ99879 126 aa7.75□□□□□ -1.17
CLCN3-210ENST00000515420 TNXBP22105 4242 aa7.74□□□□□ -1.17
CLCN3-210ENST00000515420 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.74□□□□□ -1.17
CLCN3-210ENST00000515420 LINC00587B1AMM8 73 aa7.74□□□□□ -1.17
CLCN3-210ENST00000515420 DPM2O94777 84 aa7.74□□□□□ -1.17
CLCN3-210ENST00000515420 VPREB1P12018 145 aa7.74□□□□□ -1.17
CLCN3-210ENST00000515420 FABP4P15090 132 aa7.74□□□□□ -1.17
CLCN3-210ENST00000515420 RPL24P83731 157 aaKnown RBP7.74□□□□□ -1.17
CLCN3-210ENST00000515420 KRTAP9-2Q9BYQ4 174 aa7.74□□□□□ -1.17
CLCN3-210ENST00000515420 BCE1O60756 84 aa7.73□□□□□ -1.17
CLCN3-210ENST00000515420 LINC00158P58513 81 aa7.73□□□□□ -1.17
CLCN3-210ENST00000515420 MAP1LC3CQ9BXW4 147 aa7.73□□□□□ -1.17
CLCN3-210ENST00000515420 NDUFA12Q9UI09 145 aa7.73□□□□□ -1.17
CLCN3-210ENST00000515420 MYMXA0A1B0GTQ4 84 aa7.72□□□□□ -1.17
CLCN3-210ENST00000515420 LEPROTO15243 131 aa7.72□□□□□ -1.17
CLCN3-210ENST00000515420 IGKCP01834 107 aa7.72□□□□□ -1.17
CLCN3-210ENST00000515420 RPL28P46779 137 aaKnown RBP7.72□□□□□ -1.17
CLCN3-210ENST00000515420 HERVK_113P61574 105 aa7.72□□□□□ -1.17
CLCN3-210ENST00000515420 PLEKHB2Q96CS7 222 aa7.72□□□□□ -1.17
CLCN3-210ENST00000515420 IGLV1-50A0A075B6I6 118 aa7.71□□□□□ -1.18
CLCN3-210ENST00000515420 RPL37AP8A6NKH3 93 aa7.71□□□□□ -1.18
CLCN3-210ENST00000515420 HMCN2Q8NDA2 5059 aa7.7□□□□□ -1.18
CLCN3-210ENST00000515420 GAGE10A6NGK3 116 aa7.7□□□□□ -1.18
CLCN3-210ENST00000515420 ATP6V1G1O75348 118 aa7.7□□□□□ -1.18
CLCN3-210ENST00000515420 KRTAP1-4P0C5Y4 121 aa7.7□□□□□ -1.18
CLCN3-210ENST00000515420 NMUP48645 174 aa7.7□□□□□ -1.18
CLCN3-210ENST00000515420 MEIG1Q5JSS6 88 aa7.7□□□□□ -1.18
CLCN3-210ENST00000515420 KRTAP9-6A0A140TA67 174 aa7.69□□□□□ -1.18
CLCN3-210ENST00000515420 J3QQQ9 107 aa7.69□□□□□ -1.18
CLCN3-210ENST00000515420 SMIM13P0DJ93 91 aa7.69□□□□□ -1.18
CLCN3-210ENST00000515420 COA6Q5JTJ3 125 aaKnown RBP7.69□□□□□ -1.18
CLCN3-210ENST00000515420 IGKV2-28A0A075B6P5 120 aa7.68□□□□□ -1.18
CLCN3-210ENST00000515420 SYS1-DBNDD2H3BUS1 97 aa7.68□□□□□ -1.18
CLCN3-210ENST00000515420 IGKV2D-28P01615 120 aa7.68□□□□□ -1.18
CLCN3-210ENST00000515420 TSPEAR-AS2P59090 65 aa7.68□□□□□ -1.18
CLCN3-210ENST00000515420 A0A0U1RRA0 63 aa7.67□□□□□ -1.18
CLCN3-210ENST00000515420 RPL13AP40429 203 aaKnown RBP7.67□□□□□ -1.18
CLCN3-210ENST00000515420 KRTAP13-1Q8IUC0 172 aa7.67□□□□□ -1.18
CLCN3-210ENST00000515420 MIR7-3HGQ8N6C7 128 aa7.67□□□□□ -1.18
CLCN3-210ENST00000515420 PRR26Q8N8Z3 221 aa7.67□□□□□ -1.18
CLCN3-210ENST00000515420 Q8NDZ9 215 aa7.67□□□□□ -1.18
CLCN3-210ENST00000515420 PMCHL2Q9BQD1 86 aa7.67□□□□□ -1.18
CLCN3-210ENST00000515420 IGKV2D-26A0A0A0MRZ7 120 aa7.66□□□□□ -1.18
CLCN3-210ENST00000515420 LOC107984156A0A0G2JMH3 177 aa7.66□□□□□ -1.18
CLCN3-210ENST00000515420 M0R378 163 aa7.66□□□□□ -1.18
CLCN3-210ENST00000515420 LGALS3P17931 250 aaKnown RBP7.66□□□□□ -1.18
CLCN3-210ENST00000515420 UBE2AP49459 152 aa7.66□□□□□ -1.18
CLCN3-210ENST00000515420 LINC01545Q5VT33 79 aa7.66□□□□□ -1.18
CLCN3-210ENST00000515420 PET117Q6UWS5 81 aa7.66□□□□□ -1.18
CLCN3-210ENST00000515420 ARL17AQ8IVW1 177 aa7.66□□□□□ -1.18
CLCN3-210ENST00000515420 TMEM126AQ9H061 195 aa7.66□□□□□ -1.18
CLCN3-210ENST00000515420 E9PLD3 99 aa7.65□□□□□ -1.18
CLCN3-210ENST00000515420 BOD1L2Q8IYS8 172 aa7.65□□□□□ -1.18
CLCN3-210ENST00000515420 S100A1P23297 94 aa7.64□□□□□ -1.19
CLCN3-210ENST00000515420 TMEM238C9JI98 176 aa7.62□□□□□ -1.19
CLCN3-210ENST00000515420 FAM19A1Q7Z5A9 133 aa7.62□□□□□ -1.19
CLCN3-210ENST00000515420 PRYO14603 147 aa7.61□□□□□ -1.19
CLCN3-210ENST00000515420 C3orf79P0CE67 100 aa7.61□□□□□ -1.19
CLCN3-210ENST00000515420 TRBV10-2A0A0K0K1G8 114 aa7.6□□□□□ -1.19
CLCN3-210ENST00000515420 PRLHP81277 87 aa7.6□□□□□ -1.19
CLCN3-210ENST00000515420 MIEN1Q9BRT3 115 aa7.6□□□□□ -1.19
CLCN3-210ENST00000515420 KCNQ1DNQ9H478 68 aa7.6□□□□□ -1.19
CLCN3-210ENST00000515420 A0A0J9YXY3 114 aa7.59□□□□□ -1.19
CLCN3-210ENST00000515420 NCR3O14931 201 aa7.59□□□□□ -1.19
CLCN3-210ENST00000515420 NDUFC2O95298 119 aa7.59□□□□□ -1.19
CLCN3-210ENST00000515420 CRYGAP11844 174 aa7.59□□□□□ -1.19
CLCN3-210ENST00000515420 AKR1D1P51857 326 aa7.59□□□□□ -1.19
CLCN3-210ENST00000515420 FAM229BQ4G0N7 80 aa7.59□□□□□ -1.19
CLCN3-210ENST00000515420 DAND5Q8N907 189 aa7.59□□□□□ -1.19
CLCN3-210ENST00000515420 C20orf202A1L168 122 aa7.58□□□□□ -1.2
CLCN3-210ENST00000515420 SPRR1AP35321 89 aa7.58□□□□□ -1.2
CLCN3-210ENST00000515420 S100A12P80511 92 aa7.58□□□□□ -1.2
CLCN3-210ENST00000515420 LINC00337Q8N6G1 96 aa7.58□□□□□ -1.2
CLCN3-210ENST00000515420 SPANXB1Q9NS25 103 aaPredicted RBP7.58□□□□□ -1.2
CLCN3-210ENST00000515420 TIMM17BO60830 172 aa7.57□□□□□ -1.2
CLCN3-210ENST00000515420 KRTDAPP60985 99 aa7.57□□□□□ -1.2
CLCN3-210ENST00000515420 A0A087X002 238 aa7.56□□□□□ -1.2
CLCN3-210ENST00000515420 TRBV10-3A0A0K0K1G6 114 aa7.56□□□□□ -1.2
CLCN3-210ENST00000515420 KRTAP4-16G5E9R7 235 aaPredicted RBP7.55□□□□□ -1.2
CLCN3-210ENST00000515420 DDTP30046 118 aa7.55□□□□□ -1.2
CLCN3-210ENST00000515420 ADAMTSL4-AS1Q5T5F5 129 aa7.55□□□□□ -1.2
CLCN3-210ENST00000515420 ZNF815PA8K554 130 aa7.54□□□□□ -1.2
CLCN3-210ENST00000515420 TYMSOSQ8TAI1 123 aa7.54□□□□□ -1.2
CLCN3-210ENST00000515420 LITAFQ99732 161 aa7.54□□□□□ -1.2
CLCN3-210ENST00000515420 HIGD2AQ9BW72 106 aa7.54□□□□□ -1.2
CLCN3-210ENST00000515420 ETDCA0A1B0GVM5 59 aa7.53□□□□□ -1.2
CLCN3-210ENST00000515420 IGLV6-57P01721 117 aa7.53□□□□□ -1.2
CLCN3-210ENST00000515420 SOSTDC1Q6X4U4 206 aa7.53□□□□□ -1.2
CLCN3-210ENST00000515420 CBY1Q9Y3M2 126 aa7.53□□□□□ -1.2
CLCN3-210ENST00000515420 ZNF706Q9Y5V0 76 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms