RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 SMIM13P0DJ93 91 aa6.89□□□□□ -1.31
VCAN-212ENST00000515397 VPREB1P12018 145 aa6.89□□□□□ -1.31
VCAN-212ENST00000515397 ANAPC11Q9NYG5 84 aa6.89□□□□□ -1.31
VCAN-212ENST00000515397 TMEM238C9JI98 176 aa6.88□□□□□ -1.31
VCAN-212ENST00000515397 TSPEAR-AS2P59090 65 aa6.87□□□□□ -1.31
VCAN-212ENST00000515397 COX17Q14061 63 aa6.87□□□□□ -1.31
VCAN-212ENST00000515397 RPL28P46779 137 aaKnown RBP6.86□□□□□ -1.31
VCAN-212ENST00000515397 MEIG1Q5JSS6 88 aa6.86□□□□□ -1.31
VCAN-212ENST00000515397 NDUFA12Q9UI09 145 aa6.86□□□□□ -1.31
VCAN-212ENST00000515397 IGLV1-50A0A075B6I6 118 aa6.85□□□□□ -1.31
VCAN-212ENST00000515397 ATP6V1G1O75348 118 aa6.85□□□□□ -1.31
VCAN-212ENST00000515397 UBE2AP49459 152 aa6.85□□□□□ -1.31
VCAN-212ENST00000515397 RPL24P83731 157 aaKnown RBP6.85□□□□□ -1.31
VCAN-212ENST00000515397 HSPB8Q9UJY1 196 aa6.85□□□□□ -1.31
VCAN-212ENST00000515397 LRP2P98164 4655 aa6.85□□□□□ -1.31
VCAN-212ENST00000515397 HIST1H2BKO60814 126 aa6.84□□□□□ -1.31
VCAN-212ENST00000515397 HIST1H2BJP06899 126 aa6.84□□□□□ -1.31
VCAN-212ENST00000515397 HIST1H2BOP23527 126 aa6.84□□□□□ -1.31
VCAN-212ENST00000515397 HIST1H2BBP33778 126 aa6.84□□□□□ -1.31
VCAN-212ENST00000515397 HIST1H2BDP58876 126 aa6.84□□□□□ -1.31
VCAN-212ENST00000515397 HIST1H2BCP62807 126 aa6.84□□□□□ -1.31
VCAN-212ENST00000515397 PRLHP81277 87 aa6.84□□□□□ -1.31
VCAN-212ENST00000515397 HIST2H2BEQ16778 126 aa6.84□□□□□ -1.31
VCAN-212ENST00000515397 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.84□□□□□ -1.31
VCAN-212ENST00000515397 MIR7-3HGQ8N6C7 128 aa6.84□□□□□ -1.31
VCAN-212ENST00000515397 DAND5Q8N907 189 aa6.84□□□□□ -1.31
VCAN-212ENST00000515397 HIST1H2BHQ93079 126 aa6.84□□□□□ -1.31
VCAN-212ENST00000515397 HIST1H2BNQ99877 126 aa6.84□□□□□ -1.31
VCAN-212ENST00000515397 HIST1H2BMQ99879 126 aa6.84□□□□□ -1.31
VCAN-212ENST00000515397 A0A087X002 238 aa6.83□□□□□ -1.32
VCAN-212ENST00000515397 DPM2O94777 84 aa6.83□□□□□ -1.32
VCAN-212ENST00000515397 SFTA2Q6UW10 78 aa6.83□□□□□ -1.32
VCAN-212ENST00000515397 FAM19A1Q7Z5A9 133 aa6.83□□□□□ -1.32
VCAN-212ENST00000515397 KRTAP13-1Q8IUC0 172 aa6.83□□□□□ -1.32
VCAN-212ENST00000515397 BOD1L2Q8IYS8 172 aa6.83□□□□□ -1.32
VCAN-212ENST00000515397 M0R378 163 aa6.82□□□□□ -1.32
VCAN-212ENST00000515397 NCR3O14931 201 aa6.82□□□□□ -1.32
VCAN-212ENST00000515397 LEPROTO15243 131 aa6.82□□□□□ -1.32
VCAN-212ENST00000515397 IGKCP01834 107 aa6.82□□□□□ -1.32
VCAN-212ENST00000515397 TMEM126AQ9H061 195 aa6.82□□□□□ -1.32
VCAN-212ENST00000515397 MYMXA0A1B0GTQ4 84 aa6.81□□□□□ -1.32
VCAN-212ENST00000515397 J3QQQ9 107 aa6.81□□□□□ -1.32
VCAN-212ENST00000515397 TSPAN13O95857 204 aa6.81□□□□□ -1.32
VCAN-212ENST00000515397 PLNP26678 52 aa6.81□□□□□ -1.32
VCAN-212ENST00000515397 MAP1LC3CQ9BXW4 147 aa6.81□□□□□ -1.32
VCAN-212ENST00000515397 HERV-K104P63124 156 aa6.8□□□□□ -1.32
VCAN-212ENST00000515397 PLEKHB2Q96CS7 222 aa6.8□□□□□ -1.32
VCAN-212ENST00000515397 SYS1-DBNDD2H3BUS1 97 aa6.78□□□□□ -1.32
VCAN-212ENST00000515397 LGALS3P17931 250 aaKnown RBP6.78□□□□□ -1.32
VCAN-212ENST00000515397 RPL13AP40429 203 aaKnown RBP6.78□□□□□ -1.32
VCAN-212ENST00000515397 HERVK_113P61574 105 aa6.78□□□□□ -1.32
VCAN-212ENST00000515397 NPC2P61916 151 aa6.78□□□□□ -1.32
VCAN-212ENST00000515397 KRTAP13-2Q52LG2 175 aa6.78□□□□□ -1.32
VCAN-212ENST00000515397 LPAP08519 4548 aa6.78□□□□□ -1.32
VCAN-212ENST00000515397 EIF4EBP3O60516 100 aaPredicted RBP6.77□□□□□ -1.33
VCAN-212ENST00000515397 CRYGAP11844 174 aa6.77□□□□□ -1.33
VCAN-212ENST00000515397 TYMSOSQ8TAI1 123 aa6.77□□□□□ -1.33
VCAN-212ENST00000515397 HIGD2AQ9BW72 106 aa6.77□□□□□ -1.33
VCAN-212ENST00000515397 TRBV10-3A0A0K0K1G6 114 aa6.76□□□□□ -1.33
VCAN-212ENST00000515397 ADAMTSL4-AS1Q5T5F5 129 aa6.76□□□□□ -1.33
VCAN-212ENST00000515397 LINC00587B1AMM8 73 aa6.75□□□□□ -1.33
VCAN-212ENST00000515397 A0A0J9YXY3 114 aa6.74□□□□□ -1.33
VCAN-212ENST00000515397 E9PLD3 99 aa6.74□□□□□ -1.33
VCAN-212ENST00000515397 C3orf79P0CE67 100 aa6.74□□□□□ -1.33
VCAN-212ENST00000515397 PRR4Q16378 134 aa6.74□□□□□ -1.33
VCAN-212ENST00000515397 SOSTDC1Q6X4U4 206 aa6.74□□□□□ -1.33
VCAN-212ENST00000515397 TTTY13Q9BZ97 58 aa6.74□□□□□ -1.33
VCAN-212ENST00000515397 RNF213Q63HN8 5207 aa6.73□□□□□ -1.33
VCAN-212ENST00000515397 IGKV2D-26A0A0A0MRZ7 120 aa6.73□□□□□ -1.33
VCAN-212ENST00000515397 NMUP48645 174 aa6.73□□□□□ -1.33
VCAN-212ENST00000515397 KRTDAPP60985 99 aa6.73□□□□□ -1.33
VCAN-212ENST00000515397 LINC01545Q5VT33 79 aa6.73□□□□□ -1.33
VCAN-212ENST00000515397 C3orf22Q8N5N4 141 aa6.73□□□□□ -1.33
VCAN-212ENST00000515397 PRYO14603 147 aa6.72□□□□□ -1.33
VCAN-212ENST00000515397 PET117Q6UWS5 81 aa6.72□□□□□ -1.33
VCAN-212ENST00000515397 SMCR5Q8TEV8 140 aa6.72□□□□□ -1.33
VCAN-212ENST00000515397 PPDPFQ9H3Y8 114 aa6.72□□□□□ -1.33
VCAN-212ENST00000515397 KCNQ1DNQ9H478 68 aa6.72□□□□□ -1.33
VCAN-212ENST00000515397 LOC107984156A0A0G2JMH3 177 aa6.71□□□□□ -1.34
VCAN-212ENST00000515397 ETDCA0A1B0GVM5 59 aa6.71□□□□□ -1.34
VCAN-212ENST00000515397 DDTP30046 118 aa6.71□□□□□ -1.34
VCAN-212ENST00000515397 ARL17AQ8IVW1 177 aa6.71□□□□□ -1.34
VCAN-212ENST00000515397 MIEN1Q9BRT3 115 aa6.71□□□□□ -1.34
VCAN-212ENST00000515397 KRTAP4-16G5E9R7 235 aaPredicted RBP6.7□□□□□ -1.34
VCAN-212ENST00000515397 SPRR1AP35321 89 aa6.7□□□□□ -1.34
VCAN-212ENST00000515397 FAM229BQ4G0N7 80 aa6.7□□□□□ -1.34
VCAN-212ENST00000515397 COA6Q5JTJ3 125 aaKnown RBP6.7□□□□□ -1.34
VCAN-212ENST00000515397 ATOH7Q8N100 152 aa6.7□□□□□ -1.34
VCAN-212ENST00000515397 SPRR4Q96PI1 79 aa6.7□□□□□ -1.34
VCAN-212ENST00000515397 ERC2-IT1O76042 136 aa6.69□□□□□ -1.34
VCAN-212ENST00000515397 LINC00337Q8N6G1 96 aa6.69□□□□□ -1.34
VCAN-212ENST00000515397 RETNLBQ9BQ08 111 aa6.69□□□□□ -1.34
VCAN-212ENST00000515397 ZNF815PA8K554 130 aa6.68□□□□□ -1.34
VCAN-212ENST00000515397 B5MCH6 92 aa6.68□□□□□ -1.34
VCAN-212ENST00000515397 S100A7L2Q5SY68 101 aa6.68□□□□□ -1.34
VCAN-212ENST00000515397 LINC00304Q8N9R0 145 aa6.68□□□□□ -1.34
VCAN-212ENST00000515397 LITAFQ99732 161 aa6.68□□□□□ -1.34
VCAN-212ENST00000515397 SPANXB1Q9NS25 103 aaPredicted RBP6.68□□□□□ -1.34
VCAN-212ENST00000515397 TRBV10-2A0A0K0K1G8 114 aa6.67□□□□□ -1.34
VCAN-212ENST00000515397 LINC00308Q8TCZ7 52 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 232 ms