RNA–Protein interactions for RNA: ENST00000515324.1

PDE4D-224, Transcript of phosphodiesterase 4D, humanhuman

TSL 2

Gene PDE4D, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-224ENST00000515324 GEMIN7Q9H840 131 aaKnown RBP3.49□□□□□ -1.85
PDE4D-224ENST00000515324 FAT1Q14517 4588 aa3.48□□□□□ -1.85
PDE4D-224ENST00000515324 LOC107984640A0A0U1RRK4 108 aa3.48□□□□□ -1.85
PDE4D-224ENST00000515324 TINCRA0A1B0GVN0 87 aa3.48□□□□□ -1.85
PDE4D-224ENST00000515324 A0A1W2PNN7 141 aa3.48□□□□□ -1.85
PDE4D-224ENST00000515324 LINC01549A6NIU2 74 aa3.48□□□□□ -1.85
PDE4D-224ENST00000515324 NDUFA1O15239 70 aa3.48□□□□□ -1.85
PDE4D-224ENST00000515324 NUPR1O60356 82 aa3.48□□□□□ -1.85
PDE4D-224ENST00000515324 KRTAP10-4P60372 401 aaPredicted RBP3.48□□□□□ -1.85
PDE4D-224ENST00000515324 HERVK_113P63121 156 aa3.48□□□□□ -1.85
PDE4D-224ENST00000515324 SEC11AP67812 179 aa3.48□□□□□ -1.85
PDE4D-224ENST00000515324 BAGE3Q86Y29 109 aa3.48□□□□□ -1.85
PDE4D-224ENST00000515324 FAM19A2Q8N3H0 131 aa3.48□□□□□ -1.85
PDE4D-224ENST00000515324 CHCHD1Q96BP2 118 aaKnown RBP3.48□□□□□ -1.85
PDE4D-224ENST00000515324 MRPL35Q9NZE8 188 aaKnown RBP3.48□□□□□ -1.85
PDE4D-224ENST00000515324 PLAC8Q9NZF1 115 aa3.48□□□□□ -1.85
PDE4D-224ENST00000515324 TOMM7Q9P0U1 55 aa3.48□□□□□ -1.85
PDE4D-224ENST00000515324 C6orf48Q9UBA6 75 aa3.48□□□□□ -1.85
PDE4D-224ENST00000515324 SERF1AO75920 110 aa3.47□□□□□ -1.85
PDE4D-224ENST00000515324 SPINK8P0C7L1 97 aa3.47□□□□□ -1.85
PDE4D-224ENST00000515324 IGLC3P0DOY3 106 aa3.47□□□□□ -1.85
PDE4D-224ENST00000515324 RPL18AQ02543 176 aaKnown RBP3.47□□□□□ -1.85
PDE4D-224ENST00000515324 C9orf116Q5BN46 136 aaPredicted RBP3.47□□□□□ -1.85
PDE4D-224ENST00000515324 C6orf226Q5I0X4 101 aa3.47□□□□□ -1.85
PDE4D-224ENST00000515324 LINC00469Q8N7U9 141 aa3.47□□□□□ -1.85
PDE4D-224ENST00000515324 PACRGQ96M98 296 aaPredicted RBP3.47□□□□□ -1.85
PDE4D-224ENST00000515324 SRRM2Q9UQ35 2752 aaKnown RBP3.47□□□□□ -1.85
PDE4D-224ENST00000515324 HSBP1O75506 76 aa3.46□□□□□ -1.86
PDE4D-224ENST00000515324 CKS1BP61024 79 aa3.46□□□□□ -1.86
PDE4D-224ENST00000515324 RPL37AP61513 92 aaKnown RBP3.46□□□□□ -1.86
PDE4D-224ENST00000515324 Q8IZM0 81 aa3.46□□□□□ -1.86
PDE4D-224ENST00000515324 IFI27L1Q96BM0 104 aa3.46□□□□□ -1.86
PDE4D-224ENST00000515324 LINC00474Q9P2X8 69 aa3.46□□□□□ -1.86
PDE4D-224ENST00000515324 FLG2Q5D862 2391 aaPredicted RBP3.46□□□□□ -1.86
PDE4D-224ENST00000515324 TRBV30A0A0K0K1B3 111 aa3.45□□□□□ -1.86
PDE4D-224ENST00000515324 FAM168BA1KXE4 195 aa3.45□□□□□ -1.86
PDE4D-224ENST00000515324 C11orf86A6NJI1 115 aa3.45□□□□□ -1.86
PDE4D-224ENST00000515324 TLX1NBP0CAT3 122 aa3.45□□□□□ -1.86
PDE4D-224ENST00000515324 FABP4P15090 132 aa3.45□□□□□ -1.86
PDE4D-224ENST00000515324 ZNF22P17026 224 aaPredicted RBP3.45□□□□□ -1.86
PDE4D-224ENST00000515324 HNRNPA3P51991 378 aaKnown RBP3.45□□□□□ -1.86
PDE4D-224ENST00000515324 COX7B2Q8TF08 81 aa3.45□□□□□ -1.86
PDE4D-224ENST00000515324 KRTAP9-8Q9BYQ0 159 aa3.45□□□□□ -1.86
PDE4D-224ENST00000515324 CHTOPQ9Y3Y2 248 aaKnown RBP3.45□□□□□ -1.86
PDE4D-224ENST00000515324 TRAV12-1A0A0B4J245 112 aa3.44□□□□□ -1.86
PDE4D-224ENST00000515324 H3BRM9 83 aa3.44□□□□□ -1.86
PDE4D-224ENST00000515324 HIST1H2BKO60814 126 aa3.44□□□□□ -1.86
PDE4D-224ENST00000515324 LEPROTL1O95214 131 aa3.44□□□□□ -1.86
PDE4D-224ENST00000515324 HIST1H2BJP06899 126 aa3.44□□□□□ -1.86
PDE4D-224ENST00000515324 HIST1H2BOP23527 126 aa3.44□□□□□ -1.86
PDE4D-224ENST00000515324 HIST1H2BBP33778 126 aa3.44□□□□□ -1.86
PDE4D-224ENST00000515324 HIST1H2BDP58876 126 aa3.44□□□□□ -1.86
PDE4D-224ENST00000515324 HIST1H2BCP62807 126 aa3.44□□□□□ -1.86
PDE4D-224ENST00000515324 HIST2H2BEQ16778 126 aa3.44□□□□□ -1.86
PDE4D-224ENST00000515324 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.44□□□□□ -1.86
PDE4D-224ENST00000515324 C9orf129Q5T035 196 aaKnown RBP3.44□□□□□ -1.86
PDE4D-224ENST00000515324 TMEM170BQ5T4T1 132 aa3.44□□□□□ -1.86
PDE4D-224ENST00000515324 PHF5AQ7RTV0 110 aaKnown RBP3.44□□□□□ -1.86
PDE4D-224ENST00000515324 C7orf33Q8WU49 177 aa3.44□□□□□ -1.86
PDE4D-224ENST00000515324 HIST1H2BHQ93079 126 aa3.44□□□□□ -1.86
PDE4D-224ENST00000515324 HIST1H4GQ99525 98 aa3.44□□□□□ -1.86
PDE4D-224ENST00000515324 HIST1H2BNQ99877 126 aa3.44□□□□□ -1.86
PDE4D-224ENST00000515324 HIST1H2BMQ99879 126 aa3.44□□□□□ -1.86
PDE4D-224ENST00000515324 PKIGQ9Y2B9 76 aa3.44□□□□□ -1.86
PDE4D-224ENST00000515324 NDUFC2-KCTD14E9PQ53 114 aa3.43□□□□□ -1.86
PDE4D-224ENST00000515324 F8VRH5 84 aa3.43□□□□□ -1.86
PDE4D-224ENST00000515324 PRR4Q16378 134 aa3.43□□□□□ -1.86
PDE4D-224ENST00000515324 FAM19A5Q7Z5A7 132 aaPredicted RBP3.43□□□□□ -1.86
PDE4D-224ENST00000515324 ABCA13Q86UQ4 5058 aa3.43□□□□□ -1.86
PDE4D-224ENST00000515324 TMEM223A0PJW6 202 aa3.42□□□□□ -1.86
PDE4D-224ENST00000515324 CXCL5P42830 114 aa3.42□□□□□ -1.86
PDE4D-224ENST00000515324 KRTAP11-1Q8IUC1 163 aa3.42□□□□□ -1.86
PDE4D-224ENST00000515324 ZNF625Q96I27 306 aaPredicted RBP3.42□□□□□ -1.86
PDE4D-224ENST00000515324 PMCHL2Q9BQD1 86 aa3.42□□□□□ -1.86
PDE4D-224ENST00000515324 XAGE1AQ9HD64 81 aa3.42□□□□□ -1.86
PDE4D-224ENST00000515324 VPS13BQ7Z7G8 4022 aa3.41□□□□□ -1.86
PDE4D-224ENST00000515324 PCLOQ9Y6V0 5065 aa3.41□□□□□ -1.86
PDE4D-224ENST00000515324 S100A1P23297 94 aa3.41□□□□□ -1.86
PDE4D-224ENST00000515324 PFN2P35080 140 aa3.41□□□□□ -1.86
PDE4D-224ENST00000515324 DSCR10P59022 87 aa3.41□□□□□ -1.86
PDE4D-224ENST00000515324 PRR3P79522 188 aaKnown RBP3.41□□□□□ -1.86
PDE4D-224ENST00000515324 PSORS1C2Q9UIG4 136 aa3.41□□□□□ -1.86
PDE4D-224ENST00000515324 HSPB8Q9UJY1 196 aa3.41□□□□□ -1.86
PDE4D-224ENST00000515324 A0A0J9YXY3 114 aa3.4□□□□□ -1.87
PDE4D-224ENST00000515324 ERG28Q9UKR5 140 aa3.4□□□□□ -1.87
PDE4D-224ENST00000515324 C22orf24Q9Y442 160 aa3.4□□□□□ -1.87
PDE4D-224ENST00000515324 SYS1-DBNDD2H3BUS1 97 aa3.39□□□□□ -1.87
PDE4D-224ENST00000515324 M0QXV9 152 aa3.39□□□□□ -1.87
PDE4D-224ENST00000515324 DPM2O94777 84 aa3.39□□□□□ -1.87
PDE4D-224ENST00000515324 IGKCP01834 107 aa3.39□□□□□ -1.87
PDE4D-224ENST00000515324 C1orf137Q5JT78 98 aa3.39□□□□□ -1.87
PDE4D-224ENST00000515324 MAP1LC3CQ9BXW4 147 aa3.39□□□□□ -1.87
PDE4D-224ENST00000515324 LEPROTO15243 131 aa3.38□□□□□ -1.87
PDE4D-224ENST00000515324 OXTP01178 125 aa3.38□□□□□ -1.87
PDE4D-224ENST00000515324 C3orf79P0CE67 100 aa3.38□□□□□ -1.87
PDE4D-224ENST00000515324 SMIM13P0DJ93 91 aa3.38□□□□□ -1.87
PDE4D-224ENST00000515324 LINC00158P58513 81 aa3.38□□□□□ -1.87
PDE4D-224ENST00000515324 TSPEAR-AS2P59090 65 aa3.38□□□□□ -1.87
PDE4D-224ENST00000515324 UBE2BP63146 152 aa3.38□□□□□ -1.87
PDE4D-224ENST00000515324 COX17Q14061 63 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms