RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 A0A1B0GX51 115 aa2.53□□□□□ -2
CAST-242ENST00000515063 H0YGX0 51 aa2.53□□□□□ -2
CAST-242ENST00000515063 H7C2G1 150 aa2.53□□□□□ -2
CAST-242ENST00000515063 CXCL5P42830 114 aa2.53□□□□□ -2
CAST-242ENST00000515063 RPL28P46779 137 aaKnown RBP2.53□□□□□ -2
CAST-242ENST00000515063 C2orf82Q6UX34 121 aa2.53□□□□□ -2
CAST-242ENST00000515063 DHRS4-AS1Q9P1J3 65 aa2.53□□□□□ -2
CAST-242ENST00000515063 PRO0255Q9UI72 69 aa2.53□□□□□ -2
CAST-242ENST00000515063 CELA1Q9UNI1 258 aa2.53□□□□□ -2
CAST-242ENST00000515063 APCP25054 2843 aa2.52□□□□□ -2.01
CAST-242ENST00000515063 ZANQ9Y493 2812 aa2.52□□□□□ -2.01
CAST-242ENST00000515063 SS18Q15532 418 aa2.52□□□□□ -2.01
CAST-242ENST00000515063 SOSTDC1Q6X4U4 206 aa2.52□□□□□ -2.01
CAST-242ENST00000515063 IMUPQ9GZP8 106 aa2.52□□□□□ -2.01
CAST-242ENST00000515063 ANK3Q12955 4377 aaKnown RBP2.52□□□□□ -2.01
CAST-242ENST00000515063 WNK1Q9H4A3 2382 aa2.51□□□□□ -2.01
CAST-242ENST00000515063 CRYBG3Q68DQ2 2970 aa2.51□□□□□ -2.01
CAST-242ENST00000515063 IGLV4-60A0A075B6I1 120 aa2.51□□□□□ -2.01
CAST-242ENST00000515063 LINC00959A0A1B0GUT2 108 aa2.51□□□□□ -2.01
CAST-242ENST00000515063 SNCGO76070 127 aa2.51□□□□□ -2.01
CAST-242ENST00000515063 NDUFC2O95298 119 aa2.51□□□□□ -2.01
CAST-242ENST00000515063 LY6G6DO95868 133 aa2.51□□□□□ -2.01
CAST-242ENST00000515063 CRPP02741 224 aa2.51□□□□□ -2.01
CAST-242ENST00000515063 MT-ATP8P03928 68 aa2.51□□□□□ -2.01
CAST-242ENST00000515063 INAFM2P0DMQ5 153 aa2.51□□□□□ -2.01
CAST-242ENST00000515063 APOC4P55056 127 aa2.51□□□□□ -2.01
CAST-242ENST00000515063 CKS1BP61024 79 aa2.51□□□□□ -2.01
CAST-242ENST00000515063 COX17Q14061 63 aa2.51□□□□□ -2.01
CAST-242ENST00000515063 Q8IZM0 81 aa2.51□□□□□ -2.01
CAST-242ENST00000515063 MAP1AP78559 2803 aaPredicted RBP2.5□□□□□ -2.01
CAST-242ENST00000515063 TRBV7-7A0A0K0K1E9 115 aa2.5□□□□□ -2.01
CAST-242ENST00000515063 LOC100131303A0A0U1RQF7 123 aa2.5□□□□□ -2.01
CAST-242ENST00000515063 TEX49A0A1B0GTD5 131 aa2.5□□□□□ -2.01
CAST-242ENST00000515063 H3BQ85 93 aa2.5□□□□□ -2.01
CAST-242ENST00000515063 MIFP14174 115 aa2.5□□□□□ -2.01
CAST-242ENST00000515063 NPC2P61916 151 aa2.5□□□□□ -2.01
CAST-242ENST00000515063 SDIM1Q6ZPB5 146 aa2.5□□□□□ -2.01
CAST-242ENST00000515063 MIR7-3HGQ8N6C7 128 aa2.5□□□□□ -2.01
CAST-242ENST00000515063 DAND5Q8N907 189 aa2.5□□□□□ -2.01
CAST-242ENST00000515063 C15orf53Q8NAA6 179 aa2.5□□□□□ -2.01
CAST-242ENST00000515063 WFDC9Q8NEX5 89 aa2.5□□□□□ -2.01
CAST-242ENST00000515063 CLEC2BQ92478 149 aa2.5□□□□□ -2.01
CAST-242ENST00000515063 WFDC10AQ9H1F0 79 aa2.5□□□□□ -2.01
CAST-242ENST00000515063 SND1-IT1Q9HBX3 110 aa2.5□□□□□ -2.01
CAST-242ENST00000515063 CENPEQ02224 2701 aa2.5□□□□□ -2.01
CAST-242ENST00000515063 FLNAP21333 2647 aaKnown RBP2.5□□□□□ -2.01
CAST-242ENST00000515063 PDZD2O15018 2839 aa2.5□□□□□ -2.01
CAST-242ENST00000515063 TLN2Q9Y4G6 2542 aa2.49□□□□□ -2.01
CAST-242ENST00000515063 DNHD1Q96M86 4753 aa2.49□□□□□ -2.01
CAST-242ENST00000515063 IGKV2-28A0A075B6P5 120 aa2.49□□□□□ -2.01
CAST-242ENST00000515063 H3BNG1 76 aa2.49□□□□□ -2.01
CAST-242ENST00000515063 IGKV2D-28P01615 120 aa2.49□□□□□ -2.01
CAST-242ENST00000515063 ATP5G1P05496 136 aa2.49□□□□□ -2.01
CAST-242ENST00000515063 BAALC-AS2P0C853 105 aa2.49□□□□□ -2.01
CAST-242ENST00000515063 CCL18P55774 89 aa2.49□□□□□ -2.01
CAST-242ENST00000515063 LINC00158P58513 81 aa2.49□□□□□ -2.01
CAST-242ENST00000515063 KIAA0087Q14695 138 aa2.49□□□□□ -2.01
CAST-242ENST00000515063 LINC00643Q86TS7 51 aa2.49□□□□□ -2.01
CAST-242ENST00000515063 LINC00337Q8N6G1 96 aa2.49□□□□□ -2.01
CAST-242ENST00000515063 MRAPQ8TCY5 172 aa2.49□□□□□ -2.01
CAST-242ENST00000515063 OBSCN-AS1Q96MR7 158 aa2.49□□□□□ -2.01
CAST-242ENST00000515063 LINC00167Q96N53 147 aa2.49□□□□□ -2.01
CAST-242ENST00000515063 TOMM7Q9P0U1 55 aa2.49□□□□□ -2.01
CAST-242ENST00000515063 KLK5Q9Y337 293 aaPredicted RBP2.49□□□□□ -2.01
CAST-242ENST00000515063 SETD2Q9BYW2 2564 aaPredicted RBP2.48□□□□□ -2.01
CAST-242ENST00000515063 GVQW2A0A096LPI5 108 aaPredicted RBP2.48□□□□□ -2.01
CAST-242ENST00000515063 DNAL4O96015 105 aa2.48□□□□□ -2.01
CAST-242ENST00000515063 SPART-AS1P0CW21 52 aa2.48□□□□□ -2.01
CAST-242ENST00000515063 DEFB130BP0DP73 79 aa2.48□□□□□ -2.01
CAST-242ENST00000515063 DEFB130AP0DP74 79 aa2.48□□□□□ -2.01
CAST-242ENST00000515063 DAD1P61803 113 aa2.48□□□□□ -2.01
CAST-242ENST00000515063 TTC32Q5I0X7 151 aa2.48□□□□□ -2.01
CAST-242ENST00000515063 LELP1Q5T871 98 aa2.48□□□□□ -2.01
CAST-242ENST00000515063 LCE3AQ5TA76 89 aa2.48□□□□□ -2.01
CAST-242ENST00000515063 C5orf38Q86SI9 138 aa2.48□□□□□ -2.01
CAST-242ENST00000515063 SMIM11BQ8TCY0 68 aa2.48□□□□□ -2.01
CAST-242ENST00000515063 ANAPC13Q9BS18 74 aa2.48□□□□□ -2.01
CAST-242ENST00000515063 TMEM126AQ9H061 195 aa2.48□□□□□ -2.01
CAST-242ENST00000515063 C22orf24Q9Y442 160 aa2.48□□□□□ -2.01
CAST-242ENST00000515063 SONP18583 2426 aaKnown RBP2.48□□□□□ -2.01
CAST-242ENST00000515063 ZNF469Q96JG9 3925 aaPredicted RBP2.47□□□□□ -2.01
CAST-242ENST00000515063 FAM168BA1KXE4 195 aa2.47□□□□□ -2.01
CAST-242ENST00000515063 JMJD7-PLA2G4BH0Y9G9 81 aa2.47□□□□□ -2.01
CAST-242ENST00000515063 CXCL6P80162 114 aa2.47□□□□□ -2.01
CAST-242ENST00000515063 Q8NAQ8 132 aa2.47□□□□□ -2.01
CAST-242ENST00000515063 CHCHD10Q8WYQ3 142 aaPredicted RBP2.47□□□□□ -2.01
CAST-242ENST00000515063 ANAPC11Q9NYG5 84 aa2.47□□□□□ -2.01
CAST-242ENST00000515063 NBPF19A0A087WUL8 3843 aa2.47□□□□□ -2.01
CAST-242ENST00000515063 HIVEP2P31629 2446 aa2.47□□□□□ -2.01
CAST-242ENST00000515063 CSMD2Q7Z408 3487 aa2.46□□□□□ -2.02
CAST-242ENST00000515063 IGKV3OR2-268A0A0C4DH90 116 aa2.46□□□□□ -2.02
CAST-242ENST00000515063 TMEM256-PLSCR3K7ERE1 68 aa2.46□□□□□ -2.02
CAST-242ENST00000515063 XCL1P47992 114 aa2.46□□□□□ -2.02
CAST-242ENST00000515063 REG3AQ06141 175 aa2.46□□□□□ -2.02
CAST-242ENST00000515063 S100A7L2Q5SY68 101 aa2.46□□□□□ -2.02
CAST-242ENST00000515063 LINC00269Q8N2A0 174 aa2.46□□□□□ -2.02
CAST-242ENST00000515063 ORMDL1Q9P0S3 153 aa2.46□□□□□ -2.02
CAST-242ENST00000515063 CCDC168Q8NDH2 2452 aa2.46□□□□□ -2.02
CAST-242ENST00000515063 F8P00451 2351 aa2.45□□□□□ -2.02
CAST-242ENST00000515063 NF1P21359 2839 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms