RNA–Protein interactions for RNA: ENST00000514693.5

PROM1-217, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-217ENST00000514693 DPH3P1Q9H4G8 78 aa2.06□□□□□ -2.08
PROM1-217ENST00000514693 SPG11Q96JI7 2443 aa2.06□□□□□ -2.08
PROM1-217ENST00000514693 SNRNP200O75643 2136 aaKnown RBP2.05□□□□□ -2.08
PROM1-217ENST00000514693 CSMD1Q96PZ7 3565 aa2.05□□□□□ -2.08
PROM1-217ENST00000514693 TRAV2A0A0B4J234 112 aa2.05□□□□□ -2.08
PROM1-217ENST00000514693 A0A0J9YY99 117 aa2.05□□□□□ -2.08
PROM1-217ENST00000514693 TMEM30CPA0ZSE6 113 aa2.05□□□□□ -2.08
PROM1-217ENST00000514693 ATP5EP56381 51 aaPredicted RBP2.05□□□□□ -2.08
PROM1-217ENST00000514693 CCL8P80075 99 aa2.05□□□□□ -2.08
PROM1-217ENST00000514693 RHOHQ15669 191 aa2.05□□□□□ -2.08
PROM1-217ENST00000514693 NCBP2-AS2Q69YL0 99 aa2.05□□□□□ -2.08
PROM1-217ENST00000514693 LINC00322Q6ZN03 302 aaPredicted RBP2.05□□□□□ -2.08
PROM1-217ENST00000514693 TSKUQ8WUA8 353 aa2.05□□□□□ -2.08
PROM1-217ENST00000514693 WFDC10AQ9H1F0 79 aa2.05□□□□□ -2.08
PROM1-217ENST00000514693 ARL2-SNX15V9GYD0 113 aa2.05□□□□□ -2.08
PROM1-217ENST00000514693 PTPRDP23468 1912 aa2.05□□□□□ -2.08
PROM1-217ENST00000514693 COL6A6A6NMZ7 2263 aa2.05□□□□□ -2.08
PROM1-217ENST00000514693 ACACAQ13085 2346 aa2.05□□□□□ -2.08
PROM1-217ENST00000514693 IGLV3-32A0A0A0MS00 114 aa2.04□□□□□ -2.08
PROM1-217ENST00000514693 IGKV3D-7A0A0C4DH55 119 aa2.04□□□□□ -2.08
PROM1-217ENST00000514693 IGKV3OR2-268A0A0C4DH90 116 aa2.04□□□□□ -2.08
PROM1-217ENST00000514693 APCP25054 2843 aa2.04□□□□□ -2.08
PROM1-217ENST00000514693 UBE2L3P68036 154 aaKnown RBP2.04□□□□□ -2.08
PROM1-217ENST00000514693 TMEM170BQ5T4T1 132 aa2.04□□□□□ -2.08
PROM1-217ENST00000514693 C5orf38Q86SI9 138 aa2.04□□□□□ -2.08
PROM1-217ENST00000514693 SERP2Q8N6R1 65 aa2.04□□□□□ -2.08
PROM1-217ENST00000514693 ODF3Q96PU9 254 aa2.04□□□□□ -2.08
PROM1-217ENST00000514693 TRGV9Q99603 122 aa2.04□□□□□ -2.08
PROM1-217ENST00000514693 FAM103A1Q9BTL3 118 aaKnown RBP2.04□□□□□ -2.08
PROM1-217ENST00000514693 CYSTM1Q9H1C7 97 aa2.04□□□□□ -2.08
PROM1-217ENST00000514693 PKD1L1Q8TDX9 2849 aa2.04□□□□□ -2.08
PROM1-217ENST00000514693 MTORP42345 2549 aa2.03□□□□□ -2.08
PROM1-217ENST00000514693 AHCTF1Q8WYP5 2266 aa2.03□□□□□ -2.08
PROM1-217ENST00000514693 UBE2L5PA0A1B0GUS4 154 aa2.03□□□□□ -2.08
PROM1-217ENST00000514693 hADV29S1A0JD25 119 aa2.03□□□□□ -2.08
PROM1-217ENST00000514693 F2Z2F3 143 aa2.03□□□□□ -2.08
PROM1-217ENST00000514693 BCE1O60756 84 aa2.03□□□□□ -2.08
PROM1-217ENST00000514693 IGLV3-1P01715 115 aa2.03□□□□□ -2.08
PROM1-217ENST00000514693 CD52P31358 61 aa2.03□□□□□ -2.08
PROM1-217ENST00000514693 DEFB121Q5J5C9 76 aa2.03□□□□□ -2.08
PROM1-217ENST00000514693 LYPD5Q6UWN5 251 aa2.03□□□□□ -2.08
PROM1-217ENST00000514693 LINC00643Q86TS7 51 aa2.03□□□□□ -2.08
PROM1-217ENST00000514693 DSCR8Q96T75 97 aa2.03□□□□□ -2.08
PROM1-217ENST00000514693 F8P00451 2351 aa2.03□□□□□ -2.08
PROM1-217ENST00000514693 ANKHD1Q8IWZ3 2542 aaKnown RBP2.02□□□□□ -2.09
PROM1-217ENST00000514693 CACNA1EQ15878 2313 aa2.02□□□□□ -2.09
PROM1-217ENST00000514693 TRAV23DV6A0A075B6W5 121 aa2.02□□□□□ -2.09
PROM1-217ENST00000514693 A6NIN4 97 aa2.02□□□□□ -2.09
PROM1-217ENST00000514693 PIRTP0C851 137 aa2.02□□□□□ -2.09
PROM1-217ENST00000514693 SMIM11AP58511 58 aa2.02□□□□□ -2.09
PROM1-217ENST00000514693 UBE2D3P61077 147 aa2.02□□□□□ -2.09
PROM1-217ENST00000514693 UBE2D2P62837 147 aa2.02□□□□□ -2.09
PROM1-217ENST00000514693 GDF5OSQ5U4N7 250 aa2.02□□□□□ -2.09
PROM1-217ENST00000514693 C6orf201Q7Z4U5 140 aa2.02□□□□□ -2.09
PROM1-217ENST00000514693 KRTAP13-1Q8IUC0 172 aa2.02□□□□□ -2.09
PROM1-217ENST00000514693 C10orf105Q8TEF2 133 aa2.02□□□□□ -2.09
PROM1-217ENST00000514693 NXT2Q9NPJ8 142 aaKnown RBP2.02□□□□□ -2.09
PROM1-217ENST00000514693 ASCC3Q8N3C0 2202 aaKnown RBP2.02□□□□□ -2.09
PROM1-217ENST00000514693 NBEAL2Q6ZNJ1 2754 aa2.02□□□□□ -2.09
PROM1-217ENST00000514693 ATRQ13535 2644 aa2.02□□□□□ -2.09
PROM1-217ENST00000514693 ANKRD36A6QL64 1941 aa2.01□□□□□ -2.09
PROM1-217ENST00000514693 NUPR2A6NF83 97 aa2.01□□□□□ -2.09
PROM1-217ENST00000514693 NDUFC1O43677 76 aa2.01□□□□□ -2.09
PROM1-217ENST00000514693 LEPROTL1O95214 131 aa2.01□□□□□ -2.09
PROM1-217ENST00000514693 TFF1P04155 84 aa2.01□□□□□ -2.09
PROM1-217ENST00000514693 GCHFRP30047 84 aa2.01□□□□□ -2.09
PROM1-217ENST00000514693 SERF2P84101 59 aa2.01□□□□□ -2.09
PROM1-217ENST00000514693 SPTSSAQ969W0 71 aa2.01□□□□□ -2.09
PROM1-217ENST00000514693 OBSCN-AS1Q96MR7 158 aa2.01□□□□□ -2.09
PROM1-217ENST00000514693 MRPL36Q9P0J6 103 aaKnown RBP2.01□□□□□ -2.09
PROM1-217ENST00000514693 GNG13Q9P2W3 67 aa2.01□□□□□ -2.09
PROM1-217ENST00000514693 NDUFA12Q9UI09 145 aa2.01□□□□□ -2.09
PROM1-217ENST00000514693 HILPDAQ9Y5L2 63 aa2.01□□□□□ -2.09
PROM1-217ENST00000514693 DOCK11Q5JSL3 2073 aa2□□□□□ -2.09
PROM1-217ENST00000514693 TACC2O95359 2948 aa2□□□□□ -2.09
PROM1-217ENST00000514693 IGKV3-7A0A075B6H7 116 aa2□□□□□ -2.09
PROM1-217ENST00000514693 MYMXA0A1B0GTQ4 84 aa2□□□□□ -2.09
PROM1-217ENST00000514693 CEBPZOSA8MTT3 80 aa2□□□□□ -2.09
PROM1-217ENST00000514693 IGHV3-30P01768 117 aa2□□□□□ -2.09
PROM1-217ENST00000514693 IGHV3-30-5P0DP03 117 aa2□□□□□ -2.09
PROM1-217ENST00000514693 PDE6GP18545 87 aa2□□□□□ -2.09
PROM1-217ENST00000514693 EFNA4P52798 201 aa2□□□□□ -2.09
PROM1-217ENST00000514693 SPANXN1Q5VSR9 72 aa2□□□□□ -2.09
PROM1-217ENST00000514693 IFI27L1Q96BM0 104 aa2□□□□□ -2.09
PROM1-217ENST00000514693 DYNLRB1Q9NP97 96 aa2□□□□□ -2.09
PROM1-217ENST00000514693 HIVEP3Q5T1R4 2406 aa2□□□□□ -2.09
PROM1-217ENST00000514693 CSMD2Q7Z408 3487 aa2□□□□□ -2.09
PROM1-217ENST00000514693 AKAP9Q99996 3911 aa1.99□□□□□ -2.09
PROM1-217ENST00000514693 PLXNA2O75051 1894 aa1.99□□□□□ -2.09
PROM1-217ENST00000514693 NCOA6Q14686 2063 aaPredicted RBP1.99□□□□□ -2.09
PROM1-217ENST00000514693 IGKV2-40A0A087WW87 121 aaPredicted RBP1.99□□□□□ -2.09
PROM1-217ENST00000514693 IGKV2D-40P01614 121 aaPredicted RBP1.99□□□□□ -2.09
PROM1-217ENST00000514693 CCKP06307 115 aa1.99□□□□□ -2.09
PROM1-217ENST00000514693 ZNF56Q15929 161 aa1.99□□□□□ -2.09
PROM1-217ENST00000514693 Q8N8P6 123 aa1.99□□□□□ -2.09
PROM1-217ENST00000514693 DMAC1Q96GE9 116 aa1.99□□□□□ -2.09
PROM1-217ENST00000514693 MUC22E2RYF6 1773 aaPredicted RBP1.99□□□□□ -2.09
PROM1-217ENST00000514693 MED13LQ71F56 2210 aa1.99□□□□□ -2.09
PROM1-217ENST00000514693 STAB1Q9NY15 2570 aa1.99□□□□□ -2.09
PROM1-217ENST00000514693 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms