RNA–Protein interactions for RNA: ENST00000514494.1

PPARGC1A-213, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 4

Gene PPARGC1A, Length 529 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-213ENST00000514494 RP1P56715 2156 aa2.67□□□□□ -1.98
PPARGC1A-213ENST00000514494 ARFGEF3Q5TH69 2177 aa2.67□□□□□ -1.98
PPARGC1A-213ENST00000514494 C5orf42Q9H799 3197 aa2.67□□□□□ -1.98
PPARGC1A-213ENST00000514494 J3QRE1 110 aa2.66□□□□□ -1.98
PPARGC1A-213ENST00000514494 SERF2P84101 59 aa2.66□□□□□ -1.98
PPARGC1A-213ENST00000514494 ZCCHC13Q8WW36 166 aaKnown RBP2.66□□□□□ -1.98
PPARGC1A-213ENST00000514494 MUC3AQ02505 3323 aa2.66□□□□□ -1.98
PPARGC1A-213ENST00000514494 FAM186AA6NE01 2351 aa2.65□□□□□ -1.98
PPARGC1A-213ENST00000514494 PIEZO1Q92508 2521 aa2.65□□□□□ -1.99
PPARGC1A-213ENST00000514494 A0A087WTM6 91 aa2.65□□□□□ -1.99
PPARGC1A-213ENST00000514494 TRAV21A0A0B4J279 112 aa2.65□□□□□ -1.99
PPARGC1A-213ENST00000514494 TRBV6-4A0A1B0GX49 114 aa2.65□□□□□ -1.99
PPARGC1A-213ENST00000514494 JMJD7-PLA2G4BH0Y9G9 81 aa2.65□□□□□ -1.99
PPARGC1A-213ENST00000514494 MGPP08493 103 aa2.65□□□□□ -1.99
PPARGC1A-213ENST00000514494 SPINK7P58062 85 aa2.65□□□□□ -1.99
PPARGC1A-213ENST00000514494 LINC00208Q96KT6 92 aa2.65□□□□□ -1.99
PPARGC1A-213ENST00000514494 CCL26Q9Y258 94 aa2.65□□□□□ -1.99
PPARGC1A-213ENST00000514494 XIRP2A4UGR9 3374 aa2.65□□□□□ -1.99
PPARGC1A-213ENST00000514494 H0Y9P7 68 aa2.64□□□□□ -1.99
PPARGC1A-213ENST00000514494 SPATA8Q6RVD6 105 aa2.64□□□□□ -1.99
PPARGC1A-213ENST00000514494 ENHOQ6UWT2 76 aa2.64□□□□□ -1.99
PPARGC1A-213ENST00000514494 LINC00322Q6ZN03 302 aaPredicted RBP2.64□□□□□ -1.99
PPARGC1A-213ENST00000514494 WFDC6Q9BQY6 131 aa2.64□□□□□ -1.99
PPARGC1A-213ENST00000514494 ABCA4P78363 2273 aa2.64□□□□□ -1.99
PPARGC1A-213ENST00000514494 ZFHX2Q9C0A1 2572 aaPredicted RBP2.64□□□□□ -1.99
PPARGC1A-213ENST00000514494 CACNA1HO95180 2353 aa2.64□□□□□ -1.99
PPARGC1A-213ENST00000514494 WDFY4Q6ZS81 3184 aa2.63□□□□□ -1.99
PPARGC1A-213ENST00000514494 RIF1Q5UIP0 2472 aaKnown RBP2.63□□□□□ -1.99
PPARGC1A-213ENST00000514494 SPAG17Q6Q759 2223 aa2.63□□□□□ -1.99
PPARGC1A-213ENST00000514494 SDK1Q7Z5N4 2213 aa2.63□□□□□ -1.99
PPARGC1A-213ENST00000514494 UNC13CQ8NB66 2214 aa2.63□□□□□ -1.99
PPARGC1A-213ENST00000514494 NBDYA0A0U1RRE5 68 aa2.63□□□□□ -1.99
PPARGC1A-213ENST00000514494 HRES1P13985 223 aa2.63□□□□□ -1.99
PPARGC1A-213ENST00000514494 PLNP26678 52 aa2.63□□□□□ -1.99
PPARGC1A-213ENST00000514494 TPRXLQ17RH7 258 aa2.63□□□□□ -1.99
PPARGC1A-213ENST00000514494 TRIOO75962 3097 aa2.62□□□□□ -1.99
PPARGC1A-213ENST00000514494 IGKV2-40A0A087WW87 121 aaPredicted RBP2.62□□□□□ -1.99
PPARGC1A-213ENST00000514494 CTXND1A0A1B0GTU2 59 aa2.62□□□□□ -1.99
PPARGC1A-213ENST00000514494 IGKV2D-40P01614 121 aaPredicted RBP2.62□□□□□ -1.99
PPARGC1A-213ENST00000514494 UBL5Q9BZL1 73 aa2.62□□□□□ -1.99
PPARGC1A-213ENST00000514494 SPTBN4Q9H254 2564 aa2.62□□□□□ -1.99
PPARGC1A-213ENST00000514494 MUC19Q7Z5P9 8384 aa2.62□□□□□ -1.99
PPARGC1A-213ENST00000514494 DOCK10Q96BY6 2186 aa2.61□□□□□ -1.99
PPARGC1A-213ENST00000514494 EP300Q09472 2414 aaPredicted RBP2.61□□□□□ -1.99
PPARGC1A-213ENST00000514494 A0A0G2JQZ4 141 aa2.61□□□□□ -1.99
PPARGC1A-213ENST00000514494 TRBV6-1A0A0K0K1D8 114 aa2.61□□□□□ -1.99
PPARGC1A-213ENST00000514494 A0A1W2PNN7 141 aa2.61□□□□□ -1.99
PPARGC1A-213ENST00000514494 SPACA4Q8TDM5 124 aa2.61□□□□□ -1.99
PPARGC1A-213ENST00000514494 CACNA1BQ00975 2339 aa2.6□□□□□ -1.99
PPARGC1A-213ENST00000514494 LINC01546A6NGU7 62 aa2.6□□□□□ -1.99
PPARGC1A-213ENST00000514494 RNASE3P12724 160 aaKnown RBP2.6□□□□□ -1.99
PPARGC1A-213ENST00000514494 COX6B1P14854 86 aa2.6□□□□□ -1.99
PPARGC1A-213ENST00000514494 WFDC9Q8NEX5 89 aa2.6□□□□□ -1.99
PPARGC1A-213ENST00000514494 TMEM14CQ9P0S9 112 aa2.6□□□□□ -1.99
PPARGC1A-213ENST00000514494 KLK9Q9UKQ9 250 aa2.6□□□□□ -1.99
PPARGC1A-213ENST00000514494 CFAP54Q96N23 3096 aa2.6□□□□□ -1.99
PPARGC1A-213ENST00000514494 OTOGLQ3ZCN5 2332 aa2.6□□□□□ -1.99
PPARGC1A-213ENST00000514494 COL4A2P08572 1712 aa2.59□□□□□ -1.99
PPARGC1A-213ENST00000514494 SPTBN2O15020 2390 aa2.59□□□□□ -1.99
PPARGC1A-213ENST00000514494 GPR179Q6PRD1 2367 aa2.59□□□□□ -1.99
PPARGC1A-213ENST00000514494 IGIPA6NJ69 53 aa2.59□□□□□ -1.99
PPARGC1A-213ENST00000514494 RPL37AP61513 92 aaKnown RBP2.59□□□□□ -1.99
PPARGC1A-213ENST00000514494 FXYD3Q14802 87 aa2.59□□□□□ -1.99
PPARGC1A-213ENST00000514494 C10orf113Q5VZT2 155 aa2.59□□□□□ -1.99
PPARGC1A-213ENST00000514494 F5P12259 2224 aa2.58□□□□□ -2
PPARGC1A-213ENST00000514494 GVINP1Q7Z2Y8 2422 aa2.58□□□□□ -2
PPARGC1A-213ENST00000514494 WFDC10AQ9H1F0 79 aa2.58□□□□□ -2
PPARGC1A-213ENST00000514494 LINC00472Q9H8W2 130 aa2.58□□□□□ -2
PPARGC1A-213ENST00000514494 USP34Q70CQ2 3546 aa2.58□□□□□ -2
PPARGC1A-213ENST00000514494 CACNA1GO43497 2377 aa2.58□□□□□ -2
PPARGC1A-213ENST00000514494 TPRP12270 2363 aaKnown RBP2.58□□□□□ -2
PPARGC1A-213ENST00000514494 CEP250Q9BV73 2442 aa2.58□□□□□ -2
PPARGC1A-213ENST00000514494 MAP1BP46821 2468 aaKnown RBP2.58□□□□□ -2
PPARGC1A-213ENST00000514494 KMT2BQ9UMN6 2715 aaPredicted RBP2.57□□□□□ -2
PPARGC1A-213ENST00000514494 DCHS1Q96JQ0 3298 aa2.57□□□□□ -2
PPARGC1A-213ENST00000514494 TRAV40A0A0B4J280 105 aa2.57□□□□□ -2
PPARGC1A-213ENST00000514494 IGKV2-29A2NJV5 120 aaPredicted RBP2.57□□□□□ -2
PPARGC1A-213ENST00000514494 COX17Q14061 63 aa2.57□□□□□ -2
PPARGC1A-213ENST00000514494 DEFB119Q8N690 84 aa2.57□□□□□ -2
PPARGC1A-213ENST00000514494 C5orf56Q8N8D9 126 aa2.57□□□□□ -2
PPARGC1A-213ENST00000514494 ZNF625Q96I27 306 aaPredicted RBP2.57□□□□□ -2
PPARGC1A-213ENST00000514494 Q96NJ1 140 aa2.57□□□□□ -2
PPARGC1A-213ENST00000514494 ASCC3Q8N3C0 2202 aaKnown RBP2.56□□□□□ -2
PPARGC1A-213ENST00000514494 NCOR2Q9Y618 2525 aa2.56□□□□□ -2
PPARGC1A-213ENST00000514494 TRGV4A0A0C4DH28 118 aa2.56□□□□□ -2
PPARGC1A-213ENST00000514494 I3L3M4 83 aa2.56□□□□□ -2
PPARGC1A-213ENST00000514494 M0R1W7 72 aa2.56□□□□□ -2
PPARGC1A-213ENST00000514494 DEFB134Q4QY38 66 aa2.56□□□□□ -2
PPARGC1A-213ENST00000514494 C10orf55Q5SWW7 151 aa2.56□□□□□ -2
PPARGC1A-213ENST00000514494 DEFB124Q8NES8 71 aa2.56□□□□□ -2
PPARGC1A-213ENST00000514494 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.55□□□□□ -2
PPARGC1A-213ENST00000514494 LINC00959A0A1B0GUT2 108 aa2.55□□□□□ -2
PPARGC1A-213ENST00000514494 CNOT1A5YKK6 2376 aaKnown RBP2.55□□□□□ -2
PPARGC1A-213ENST00000514494 CACNA1AO00555 2505 aa2.55□□□□□ -2
PPARGC1A-213ENST00000514494 IGKV4-1P06312 121 aa2.55□□□□□ -2
PPARGC1A-213ENST00000514494 LINC00304Q8N9R0 145 aa2.55□□□□□ -2
PPARGC1A-213ENST00000514494 GAFA1Q96PS6 74 aa2.55□□□□□ -2
PPARGC1A-213ENST00000514494 VPS13AQ96RL7 3174 aa2.55□□□□□ -2
PPARGC1A-213ENST00000514494 DMXL1Q9Y485 3027 aa2.55□□□□□ -2
PPARGC1A-213ENST00000514494 PRB1P04280 392 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms