RNA–Protein interactions for RNA: ENST00000513433.1

SNX25-206, Transcript of sorting nexin 25, humanhuman

TSL 3

Gene SNX25, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-206ENST00000513433 SPATA12Q7Z6I5 190 aa3.03□□□□□ -1.92
SNX25-206ENST00000513433 LINC00469Q8N7U9 141 aa3.03□□□□□ -1.92
SNX25-206ENST00000513433 GEMIN7Q9H840 131 aaKnown RBP3.03□□□□□ -1.92
SNX25-206ENST00000513433 CDKN2A-AS1Q9UH64 79 aa3.03□□□□□ -1.92
SNX25-206ENST00000513433 HMCN2Q8NDA2 5059 aa3.03□□□□□ -1.92
SNX25-206ENST00000513433 HSPG2P98160 4391 aa3.03□□□□□ -1.92
SNX25-206ENST00000513433 DYNC1H1Q14204 4646 aaKnown RBP3.02□□□□□ -1.93
SNX25-206ENST00000513433 FLG2Q5D862 2391 aaPredicted RBP3.02□□□□□ -1.93
SNX25-206ENST00000513433 PKD1P98161 4303 aa3.02□□□□□ -1.93
SNX25-206ENST00000513433 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.02□□□□□ -1.93
SNX25-206ENST00000513433 IGHV3-64A0A075B6Q5 118 aa3.02□□□□□ -1.93
SNX25-206ENST00000513433 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.02□□□□□ -1.93
SNX25-206ENST00000513433 F8WDY8 70 aa3.02□□□□□ -1.93
SNX25-206ENST00000513433 H3BRM9 83 aa3.02□□□□□ -1.93
SNX25-206ENST00000513433 ZNF22P17026 224 aaPredicted RBP3.02□□□□□ -1.93
SNX25-206ENST00000513433 PLNP26678 52 aa3.02□□□□□ -1.93
SNX25-206ENST00000513433 XGP55808 180 aa3.02□□□□□ -1.93
SNX25-206ENST00000513433 NDUFA6P56556 154 aa3.02□□□□□ -1.93
SNX25-206ENST00000513433 SPAG11BQ08648 103 aa3.02□□□□□ -1.93
SNX25-206ENST00000513433 C5orf38Q86SI9 138 aa3.02□□□□□ -1.93
SNX25-206ENST00000513433 Q8IZM0 81 aa3.02□□□□□ -1.93
SNX25-206ENST00000513433 MAP1LC3CQ9BXW4 147 aa3.02□□□□□ -1.93
SNX25-206ENST00000513433 CHTOPQ9Y3Y2 248 aaKnown RBP3.02□□□□□ -1.93
SNX25-206ENST00000513433 MYCBP2O75592 4640 aa3.02□□□□□ -1.93
SNX25-206ENST00000513433 C11orf86A6NJI1 115 aa3.01□□□□□ -1.93
SNX25-206ENST00000513433 C16orf90A8MZG2 172 aa3.01□□□□□ -1.93
SNX25-206ENST00000513433 SYS1-DBNDD2H3BUS1 97 aa3.01□□□□□ -1.93
SNX25-206ENST00000513433 S100A6P06703 90 aa3.01□□□□□ -1.93
SNX25-206ENST00000513433 INAFM2P0DMQ5 153 aa3.01□□□□□ -1.93
SNX25-206ENST00000513433 FABP4P15090 132 aa3.01□□□□□ -1.93
SNX25-206ENST00000513433 CXCL5P42830 114 aa3.01□□□□□ -1.93
SNX25-206ENST00000513433 HIST3H2BBQ8N257 126 aa3.01□□□□□ -1.93
SNX25-206ENST00000513433 ORAOV1Q8WV07 137 aa3.01□□□□□ -1.93
SNX25-206ENST00000513433 C2orf48Q96LS8 159 aa3.01□□□□□ -1.93
SNX25-206ENST00000513433 CARD19Q96LW7 228 aa3.01□□□□□ -1.93
SNX25-206ENST00000513433 HIST1H2BLQ99880 126 aa3.01□□□□□ -1.93
SNX25-206ENST00000513433 MRPL35Q9NZE8 188 aaKnown RBP3.01□□□□□ -1.93
SNX25-206ENST00000513433 PKIGQ9Y2B9 76 aa3.01□□□□□ -1.93
SNX25-206ENST00000513433 APOBP04114 4563 aaKnown RBP3□□□□□ -1.93
SNX25-206ENST00000513433 H0Y8G0 127 aa3□□□□□ -1.93
SNX25-206ENST00000513433 NDUFA1O15239 70 aa3□□□□□ -1.93
SNX25-206ENST00000513433 DPM2O94777 84 aa3□□□□□ -1.93
SNX25-206ENST00000513433 SPINK8P0C7L1 97 aa3□□□□□ -1.93
SNX25-206ENST00000513433 C3orf79P0CE67 100 aa3□□□□□ -1.93
SNX25-206ENST00000513433 S100A2P29034 98 aa3□□□□□ -1.93
SNX25-206ENST00000513433 FUSP35637 526 aaKnown RBP eCLIP3□□□□□ -1.93
SNX25-206ENST00000513433 SYCNQ0VAF6 134 aa3□□□□□ -1.93
SNX25-206ENST00000513433 KIAA0087Q14695 138 aa3□□□□□ -1.93
SNX25-206ENST00000513433 TMEM170BQ5T4T1 132 aa3□□□□□ -1.93
SNX25-206ENST00000513433 LINC01545Q5VT33 79 aa3□□□□□ -1.93
SNX25-206ENST00000513433 SFTA2Q6UW10 78 aa3□□□□□ -1.93
SNX25-206ENST00000513433 Q6ZSA8 131 aa3□□□□□ -1.93
SNX25-206ENST00000513433 KRTAP11-1Q8IUC1 163 aa3□□□□□ -1.93
SNX25-206ENST00000513433 C9orf163Q8N9P6 203 aa3□□□□□ -1.93
SNX25-206ENST00000513433 CAMK2N2Q96S95 79 aa3□□□□□ -1.93
SNX25-206ENST00000513433 PRO0461Q9UI25 63 aa3□□□□□ -1.93
SNX25-206ENST00000513433 TRBV30A0A0K0K1B3 111 aa2.99□□□□□ -1.93
SNX25-206ENST00000513433 TMEM223A0PJW6 202 aa2.99□□□□□ -1.93
SNX25-206ENST00000513433 C20orf202A1L168 122 aa2.99□□□□□ -1.93
SNX25-206ENST00000513433 IGKCP01834 107 aa2.99□□□□□ -1.93
SNX25-206ENST00000513433 AKR1D1P51857 326 aa2.99□□□□□ -1.93
SNX25-206ENST00000513433 KRTDAPP60985 99 aa2.99□□□□□ -1.93
SNX25-206ENST00000513433 CIRBPQ14011 172 aaKnown RBP2.99□□□□□ -1.93
SNX25-206ENST00000513433 Q6ZRU5 148 aa2.99□□□□□ -1.93
SNX25-206ENST00000513433 COX7B2Q8TF08 81 aa2.99□□□□□ -1.93
SNX25-206ENST00000513433 LINC00526Q96FQ7 95 aa2.99□□□□□ -1.93
SNX25-206ENST00000513433 FAT4Q6V0I7 4981 aa2.99□□□□□ -1.93
SNX25-206ENST00000513433 DNAH5Q8TE73 4624 aa2.99□□□□□ -1.93
SNX25-206ENST00000513433 TLX1NBP0CAT3 122 aa2.98□□□□□ -1.93
SNX25-206ENST00000513433 CKS1BP61024 79 aa2.98□□□□□ -1.93
SNX25-206ENST00000513433 HERVK_113P61574 105 aa2.98□□□□□ -1.93
SNX25-206ENST00000513433 SRSF9Q13242 221 aaKnown RBP eCLIP2.98□□□□□ -1.93
SNX25-206ENST00000513433 LINC01620Q4KN68 170 aa2.98□□□□□ -1.93
SNX25-206ENST00000513433 C2orf82Q6UX34 121 aa2.98□□□□□ -1.93
SNX25-206ENST00000513433 SDIM1Q6ZPB5 146 aa2.98□□□□□ -1.93
SNX25-206ENST00000513433 PMCHL2Q9BQD1 86 aa2.98□□□□□ -1.93
SNX25-206ENST00000513433 TOMM7Q9P0U1 55 aa2.98□□□□□ -1.93
SNX25-206ENST00000513433 C6orf48Q9UBA6 75 aa2.98□□□□□ -1.93
SNX25-206ENST00000513433 LOC107984640A0A0U1RRK4 108 aa2.97□□□□□ -1.93
SNX25-206ENST00000513433 E9PLD3 99 aa2.97□□□□□ -1.93
SNX25-206ENST00000513433 NDUFC2-KCTD14E9PQ53 114 aa2.97□□□□□ -1.93
SNX25-206ENST00000513433 C6orf226Q5I0X4 101 aa2.97□□□□□ -1.93
SNX25-206ENST00000513433 UNQ6190/PRO20217Q6UXQ8 127 aa2.97□□□□□ -1.93
SNX25-206ENST00000513433 SPACA4Q8TDM5 124 aa2.97□□□□□ -1.93
SNX25-206ENST00000513433 PLEKHB2Q96CS7 222 aa2.97□□□□□ -1.93
SNX25-206ENST00000513433 ZNF625Q96I27 306 aaPredicted RBP2.97□□□□□ -1.93
SNX25-206ENST00000513433 FAM218AQ96MZ4 157 aa2.97□□□□□ -1.93
SNX25-206ENST00000513433 ANAPC11Q9NYG5 84 aa2.97□□□□□ -1.93
SNX25-206ENST00000513433 LINC00474Q9P2X8 69 aa2.97□□□□□ -1.93
SNX25-206ENST00000513433 LRP1BQ9NZR2 4599 aa2.97□□□□□ -1.93
SNX25-206ENST00000513433 A0A096LNI7 61 aa2.96□□□□□ -1.94
SNX25-206ENST00000513433 J3QQQ9 107 aa2.96□□□□□ -1.94
SNX25-206ENST00000513433 LEPROTO15243 131 aa2.96□□□□□ -1.94
SNX25-206ENST00000513433 NMUP48645 174 aa2.96□□□□□ -1.94
SNX25-206ENST00000513433 TSPEAR-AS2P59090 65 aa2.96□□□□□ -1.94
SNX25-206ENST00000513433 HERV-K104P63124 156 aa2.96□□□□□ -1.94
SNX25-206ENST00000513433 RPL18AQ02543 176 aaKnown RBP2.96□□□□□ -1.94
SNX25-206ENST00000513433 COX17Q14061 63 aa2.96□□□□□ -1.94
SNX25-206ENST00000513433 SCXQ7RTU7 201 aa2.96□□□□□ -1.94
SNX25-206ENST00000513433 TYMSOSQ8TAI1 123 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms