RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 GAGE2DQ9UEU5 116 aa8.01□□□□□ -1.13
PDPN-210ENST00000513143 KRTAP10-1P60331 282 aa8□□□□□ -1.13
PDPN-210ENST00000513143 LCE3BQ5TA77 95 aa8□□□□□ -1.13
PDPN-210ENST00000513143 C2orf91Q6ZV80 131 aa8□□□□□ -1.13
PDPN-210ENST00000513143 DAND5Q8N907 189 aa8□□□□□ -1.13
PDPN-210ENST00000513143 SPANXDQ9BXN6 97 aa8□□□□□ -1.13
PDPN-210ENST00000513143 SPANXB1Q9NS25 103 aaPredicted RBP8□□□□□ -1.13
PDPN-210ENST00000513143 SPANXCQ9NY87 97 aa8□□□□□ -1.13
PDPN-210ENST00000513143 LINC00474Q9P2X8 69 aa8□□□□□ -1.13
PDPN-210ENST00000513143 IGKV2-24A0A0C4DH68 120 aa7.99□□□□□ -1.13
PDPN-210ENST00000513143 CHTF8P0CG12 524 aa7.99□□□□□ -1.13
PDPN-210ENST00000513143 C9orf129Q5T035 196 aaKnown RBP7.99□□□□□ -1.13
PDPN-210ENST00000513143 Q6ZVH6 145 aa7.99□□□□□ -1.13
PDPN-210ENST00000513143 MIEN1Q9BRT3 115 aa7.99□□□□□ -1.13
PDPN-210ENST00000513143 XAGE1AQ9HD64 81 aa7.99□□□□□ -1.13
PDPN-210ENST00000513143 DYNC1H1Q14204 4646 aaKnown RBP7.98□□□□□ -1.13
PDPN-210ENST00000513143 LOC107984156A0A0G2JMH3 177 aa7.98□□□□□ -1.13
PDPN-210ENST00000513143 PANO1I0J062 215 aa7.98□□□□□ -1.13
PDPN-210ENST00000513143 Q6ZSA8 131 aa7.98□□□□□ -1.13
PDPN-210ENST00000513143 ARL17AQ8IVW1 177 aa7.98□□□□□ -1.13
PDPN-210ENST00000513143 SPACA4Q8TDM5 124 aa7.98□□□□□ -1.13
PDPN-210ENST00000513143 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.98□□□□□ -1.13
PDPN-210ENST00000513143 LINC00308Q8TCZ7 52 aa7.97□□□□□ -1.13
PDPN-210ENST00000513143 DNAH8Q96JB1 4490 aa7.96□□□□□ -1.13
PDPN-210ENST00000513143 LRP1BQ9NZR2 4599 aa7.96□□□□□ -1.14
PDPN-210ENST00000513143 TSTD3H0UI37 97 aa7.96□□□□□ -1.14
PDPN-210ENST00000513143 EIF4EBP3O60516 100 aaPredicted RBP7.96□□□□□ -1.14
PDPN-210ENST00000513143 IFITM1P13164 125 aa7.96□□□□□ -1.14
PDPN-210ENST00000513143 SRSF9Q13242 221 aaKnown RBP eCLIP7.96□□□□□ -1.14
PDPN-210ENST00000513143 SOSTDC1Q6X4U4 206 aa7.96□□□□□ -1.14
PDPN-210ENST00000513143 PPDPFQ9H3Y8 114 aa7.96□□□□□ -1.14
PDPN-210ENST00000513143 FAM30AQ9NZY2 134 aa7.96□□□□□ -1.14
PDPN-210ENST00000513143 PLA2G2DQ9UNK4 145 aa7.96□□□□□ -1.14
PDPN-210ENST00000513143 NPC2P61916 151 aa7.95□□□□□ -1.14
PDPN-210ENST00000513143 A0A1W2PNN7 141 aa7.94□□□□□ -1.14
PDPN-210ENST00000513143 TAL2Q16559 108 aa7.94□□□□□ -1.14
PDPN-210ENST00000513143 MUSTN1Q8IVN3 82 aa7.94□□□□□ -1.14
PDPN-210ENST00000513143 COPS9Q8WXC6 57 aa7.94□□□□□ -1.14
PDPN-210ENST00000513143 HIST1H4GQ99525 98 aa7.94□□□□□ -1.14
PDPN-210ENST00000513143 FAM168BA1KXE4 195 aa7.93□□□□□ -1.14
PDPN-210ENST00000513143 EPM2AB3EWF7 344 aa7.93□□□□□ -1.14
PDPN-210ENST00000513143 HNRNPA3P51991 378 aaKnown RBP7.93□□□□□ -1.14
PDPN-210ENST00000513143 KRTAP7-1Q8IUC3 87 aa7.93□□□□□ -1.14
PDPN-210ENST00000513143 Q8NDZ9 215 aa7.93□□□□□ -1.14
PDPN-210ENST00000513143 DPH3Q96FX2 82 aa7.93□□□□□ -1.14
PDPN-210ENST00000513143 A0A087WYN8 130 aa7.92□□□□□ -1.14
PDPN-210ENST00000513143 VPREB1P12018 145 aa7.92□□□□□ -1.14
PDPN-210ENST00000513143 SERTAD4-AS1Q5TG53 156 aa7.92□□□□□ -1.14
PDPN-210ENST00000513143 PLAC8Q9NZF1 115 aa7.92□□□□□ -1.14
PDPN-210ENST00000513143 IGLV5-37A0A075B6J1 123 aa7.91□□□□□ -1.14
PDPN-210ENST00000513143 NDUFC2O95298 119 aa7.91□□□□□ -1.14
PDPN-210ENST00000513143 RPL24P83731 157 aaKnown RBP7.91□□□□□ -1.14
PDPN-210ENST00000513143 HSD52Q0P140 79 aa7.9□□□□□ -1.14
PDPN-210ENST00000513143 FAM19A5Q7Z5A7 132 aaPredicted RBP7.9□□□□□ -1.14
PDPN-210ENST00000513143 CEND1Q8N111 149 aa7.9□□□□□ -1.14
PDPN-210ENST00000513143 CIRBP-AS1Q8TBR5 109 aa7.9□□□□□ -1.14
PDPN-210ENST00000513143 EPPK1P58107 5090 aaKnown RBP7.89□□□□□ -1.15
PDPN-210ENST00000513143 SCXQ7RTU7 201 aa7.89□□□□□ -1.15
PDPN-210ENST00000513143 DDTP30046 118 aa7.88□□□□□ -1.15
PDPN-210ENST00000513143 PRR3P79522 188 aaKnown RBP7.88□□□□□ -1.15
PDPN-210ENST00000513143 NKAPP1Q8N9T2 125 aa7.88□□□□□ -1.15
PDPN-210ENST00000513143 C22orf24Q9Y442 160 aa7.88□□□□□ -1.15
PDPN-210ENST00000513143 TRBV10-2A0A0K0K1G8 114 aa7.87□□□□□ -1.15
PDPN-210ENST00000513143 A4D1N5 150 aa7.87□□□□□ -1.15
PDPN-210ENST00000513143 M0QXV9 152 aa7.87□□□□□ -1.15
PDPN-210ENST00000513143 XGP55808 180 aa7.87□□□□□ -1.15
PDPN-210ENST00000513143 CTAG1AP78358 180 aa7.87□□□□□ -1.15
PDPN-210ENST00000513143 APOBP04114 4563 aaKnown RBP7.87□□□□□ -1.15
PDPN-210ENST00000513143 IGKV2-28A0A075B6P5 120 aa7.86□□□□□ -1.15
PDPN-210ENST00000513143 M0R378 163 aa7.86□□□□□ -1.15
PDPN-210ENST00000513143 NCR3O14931 201 aa7.86□□□□□ -1.15
PDPN-210ENST00000513143 IGKV2D-28P01615 120 aa7.86□□□□□ -1.15
PDPN-210ENST00000513143 HAMPP81172 84 aa7.86□□□□□ -1.15
PDPN-210ENST00000513143 MRPL55Q7Z7F7 128 aaKnown RBP7.86□□□□□ -1.15
PDPN-210ENST00000513143 FXYD2P54710 66 aa7.85□□□□□ -1.15
PDPN-210ENST00000513143 LBHQ53QV2 105 aaPredicted RBP7.85□□□□□ -1.15
PDPN-210ENST00000513143 PHF5AQ7RTV0 110 aaKnown RBP7.85□□□□□ -1.15
PDPN-210ENST00000513143 KRTAP19-1Q8IUB9 90 aa7.85□□□□□ -1.15
PDPN-210ENST00000513143 C7orf33Q8WU49 177 aa7.85□□□□□ -1.15
PDPN-210ENST00000513143 KRTAP9-9Q9BYP9 154 aa7.85□□□□□ -1.15
PDPN-210ENST00000513143 KRTAP9-4Q9BYQ2 154 aa7.85□□□□□ -1.15
PDPN-210ENST00000513143 LINC00167Q96N53 147 aa7.84□□□□□ -1.15
PDPN-210ENST00000513143 TMEM238LA0A1B0GVL6 79 aa7.83□□□□□ -1.16
PDPN-210ENST00000513143 CDK2AP2O75956 126 aa7.83□□□□□ -1.16
PDPN-210ENST00000513143 BVES-AS1Q5T3Y7 98 aa7.83□□□□□ -1.16
PDPN-210ENST00000513143 LINC00337Q8N6G1 96 aa7.83□□□□□ -1.16
PDPN-210ENST00000513143 GAGE10A6NGK3 116 aa7.82□□□□□ -1.16
PDPN-210ENST00000513143 M0R143 59 aa7.82□□□□□ -1.16
PDPN-210ENST00000513143 CFC1BP0CG36 223 aa7.82□□□□□ -1.16
PDPN-210ENST00000513143 CFC1P0CG37 223 aa7.82□□□□□ -1.16
PDPN-210ENST00000513143 IGLV1-50A0A075B6I6 118 aa7.81□□□□□ -1.16
PDPN-210ENST00000513143 TRAV13-2A0A0B4J235 113 aa7.81□□□□□ -1.16
PDPN-210ENST00000513143 IGLV6-57P01721 117 aa7.81□□□□□ -1.16
PDPN-210ENST00000513143 HINT1P49773 126 aaPredicted RBP7.81□□□□□ -1.16
PDPN-210ENST00000513143 A0A0B4J2C4 111 aa7.8□□□□□ -1.16
PDPN-210ENST00000513143 TRBV10-3A0A0K0K1G6 114 aa7.8□□□□□ -1.16
PDPN-210ENST00000513143 RPL37AP8A6NKH3 93 aa7.8□□□□□ -1.16
PDPN-210ENST00000513143 S100A7L2Q5SY68 101 aa7.8□□□□□ -1.16
PDPN-210ENST00000513143 OR13C6PQ8NH95 151 aa7.8□□□□□ -1.16
PDPN-210ENST00000513143 TMEM126AQ9H061 195 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms