RNA–Protein interactions for RNA: ENST00000513098.5

UBE2D3-231, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 3

Gene UBE2D3, Length 702 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-231	ENST00000513098	PLEKHB2	Q96CS7	222 aa		7.31	□□□□□ -1.24
UBE2D3-231	ENST00000513098	TMEM238	C9JI98	176 aa		7.3	□□□□□ -1.24
UBE2D3-231	ENST00000513098	APOC3	P02656	99 aa		7.3	□□□□□ -1.24
UBE2D3-231	ENST00000513098	FAM19A1	Q7Z5A9	133 aa		7.3	□□□□□ -1.24
UBE2D3-231	ENST00000513098	CHCHD1	Q96BP2	118 aa	Known RBP	7.3	□□□□□ -1.24
UBE2D3-231	ENST00000513098	YPEL4	Q96NS1	127 aa		7.3	□□□□□ -1.24
UBE2D3-231	ENST00000513098	CHTOP	Q9Y3Y2	248 aa	Known RBP	7.3	□□□□□ -1.24
UBE2D3-231	ENST00000513098	TMEM223	A0PJW6	202 aa		7.29	□□□□□ -1.24
UBE2D3-231	ENST00000513098	PRLH	P81277	87 aa		7.29	□□□□□ -1.24
UBE2D3-231	ENST00000513098	LINC00304	Q8N9R0	145 aa		7.29	□□□□□ -1.24
UBE2D3-231	ENST00000513098	IGKV2D-26	A0A0A0MRZ7	120 aa		7.28	□□□□□ -1.24
UBE2D3-231	ENST00000513098	NDUFA5	Q16718	116 aa		7.28	□□□□□ -1.24
UBE2D3-231	ENST00000513098	MUC17	Q685J3	4493 aa		7.27	□□□□□ -1.25
UBE2D3-231	ENST00000513098	LINC00158	P58513	81 aa		7.27	□□□□□ -1.25
UBE2D3-231	ENST00000513098	CBLN2	Q8IUK8	224 aa		7.27	□□□□□ -1.25
UBE2D3-231	ENST00000513098	IFI27L1	Q96BM0	104 aa		7.27	□□□□□ -1.25
UBE2D3-231	ENST00000513098	FAT4	Q6V0I7	4981 aa		7.25	□□□□□ -1.25
UBE2D3-231	ENST00000513098	LINC00587	B1AMM8	73 aa		7.25	□□□□□ -1.25
UBE2D3-231	ENST00000513098	HERV-K104	P63124	156 aa		7.24	□□□□□ -1.25
UBE2D3-231	ENST00000513098	TPRXL	Q17RH7	258 aa		7.24	□□□□□ -1.25
UBE2D3-231	ENST00000513098	KCNQ1DN	Q9H478	68 aa		7.24	□□□□□ -1.25
UBE2D3-231	ENST00000513098		A0A0U1RQV1	116 aa		7.23	□□□□□ -1.25
UBE2D3-231	ENST00000513098	SMIM13	P0DJ93	91 aa		7.23	□□□□□ -1.25
UBE2D3-231	ENST00000513098	SPRR1A	P35321	89 aa		7.23	□□□□□ -1.25
UBE2D3-231	ENST00000513098	SPAG11A	Q6PDA7	123 aa		7.23	□□□□□ -1.25
UBE2D3-231	ENST00000513098	LINC00337	Q8N6G1	96 aa		7.23	□□□□□ -1.25
UBE2D3-231	ENST00000513098	SPRR4	Q96PI1	79 aa		7.23	□□□□□ -1.25
UBE2D3-231	ENST00000513098	LOC107984156	A0A0G2JMH3	177 aa		7.22	□□□□□ -1.25
UBE2D3-231	ENST00000513098	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	7.22	□□□□□ -1.25
UBE2D3-231	ENST00000513098	PRY	O14603	147 aa		7.22	□□□□□ -1.25
UBE2D3-231	ENST00000513098	ATP6V1G1	O75348	118 aa		7.22	□□□□□ -1.25
UBE2D3-231	ENST00000513098	ARL17A	Q8IVW1	177 aa		7.22	□□□□□ -1.25
UBE2D3-231	ENST00000513098	HIGD2A	Q9BW72	106 aa		7.22	□□□□□ -1.25
UBE2D3-231	ENST00000513098		A0A0U1RRA0	63 aa		7.21	□□□□□ -1.26
UBE2D3-231	ENST00000513098	BOD1L2	Q8IYS8	172 aa		7.21	□□□□□ -1.26
UBE2D3-231	ENST00000513098	C3orf22	Q8N5N4	141 aa		7.21	□□□□□ -1.26
UBE2D3-231	ENST00000513098	MIR7-3HG	Q8N6C7	128 aa		7.21	□□□□□ -1.26
UBE2D3-231	ENST00000513098	RETNLB	Q9BQ08	111 aa		7.21	□□□□□ -1.26
UBE2D3-231	ENST00000513098	ZNF706	Q9Y5V0	76 aa	Predicted RBP	7.21	□□□□□ -1.26
UBE2D3-231	ENST00000513098	IGLV7-46	A0A075B6I9	117 aa		7.2	□□□□□ -1.26
UBE2D3-231	ENST00000513098	MYMX	A0A1B0GTQ4	84 aa		7.2	□□□□□ -1.26
UBE2D3-231	ENST00000513098	HSBP1	O75506	76 aa		7.2	□□□□□ -1.26
UBE2D3-231	ENST00000513098	NDUFA12	Q9UI09	145 aa		7.2	□□□□□ -1.26
UBE2D3-231	ENST00000513098	MEIG1	Q5JSS6	88 aa		7.19	□□□□□ -1.26
UBE2D3-231	ENST00000513098	FAM19A2	Q8N3H0	131 aa		7.19	□□□□□ -1.26
UBE2D3-231	ENST00000513098	MAP1LC3C	Q9BXW4	147 aa		7.19	□□□□□ -1.26
UBE2D3-231	ENST00000513098	TRBV10-2	A0A0K0K1G8	114 aa		7.17	□□□□□ -1.26
UBE2D3-231	ENST00000513098	LINC00483	Q53H64	154 aa		7.17	□□□□□ -1.26
UBE2D3-231	ENST00000513098	FP248	Q71RG6	208 aa	Predicted RBP	7.17	□□□□□ -1.26
UBE2D3-231	ENST00000513098	SMCR5	Q8TEV8	140 aa		7.17	□□□□□ -1.26
UBE2D3-231	ENST00000513098	CDIP1	Q9H305	208 aa		7.17	□□□□□ -1.26
UBE2D3-231	ENST00000513098	TRBV10-3	A0A0K0K1G6	114 aa		7.16	□□□□□ -1.26
UBE2D3-231	ENST00000513098	LEPROT	O15243	131 aa		7.16	□□□□□ -1.26
UBE2D3-231	ENST00000513098	LEPROTL1	O95214	131 aa		7.16	□□□□□ -1.26
UBE2D3-231	ENST00000513098	TRGC2	P03986	189 aa		7.16	□□□□□ -1.26
UBE2D3-231	ENST00000513098	PLN	P26678	52 aa		7.16	□□□□□ -1.26
UBE2D3-231	ENST00000513098	LINC00310	P59036	64 aa		7.16	□□□□□ -1.26
UBE2D3-231	ENST00000513098	PPDPF	Q9H3Y8	114 aa		7.16	□□□□□ -1.26
UBE2D3-231	ENST00000513098	ETDC	A0A1B0GVM5	59 aa		7.15	□□□□□ -1.26
UBE2D3-231	ENST00000513098	NCR3	O14931	201 aa		7.15	□□□□□ -1.26
UBE2D3-231	ENST00000513098	TSPEAR-AS2	P59090	65 aa		7.15	□□□□□ -1.26
UBE2D3-231	ENST00000513098	C4orf48	Q5BLP8	95 aa		7.15	□□□□□ -1.26
UBE2D3-231	ENST00000513098	LCE2A	Q5TA79	106 aa	Predicted RBP	7.15	□□□□□ -1.26
UBE2D3-231	ENST00000513098		B5MCH6	92 aa		7.14	□□□□□ -1.27
UBE2D3-231	ENST00000513098	SERF1A	O75920	110 aa		7.14	□□□□□ -1.27
UBE2D3-231	ENST00000513098	SPINK1	P00995	79 aa		7.14	□□□□□ -1.27
UBE2D3-231	ENST00000513098	NMU	P48645	174 aa		7.14	□□□□□ -1.27
UBE2D3-231	ENST00000513098	S100A12	P80511	92 aa		7.14	□□□□□ -1.27
UBE2D3-231	ENST00000513098	HSPB8	Q9UJY1	196 aa		7.14	□□□□□ -1.27
UBE2D3-231	ENST00000513098		J3QQQ9	107 aa		7.13	□□□□□ -1.27
UBE2D3-231	ENST00000513098	NDUFC2	O95298	119 aa		7.13	□□□□□ -1.27
UBE2D3-231	ENST00000513098		Q8NBF4	154 aa		7.13	□□□□□ -1.27
UBE2D3-231	ENST00000513098	DPM2	O94777	84 aa		7.12	□□□□□ -1.27
UBE2D3-231	ENST00000513098	LCE2D	Q5TA82	110 aa	Predicted RBP	7.12	□□□□□ -1.27
UBE2D3-231	ENST00000513098		H0Y8G0	127 aa		7.11	□□□□□ -1.27
UBE2D3-231	ENST00000513098	IGLV6-57	P01721	117 aa		7.11	□□□□□ -1.27
UBE2D3-231	ENST00000513098	DDT	P30046	118 aa		7.11	□□□□□ -1.27
UBE2D3-231	ENST00000513098	RPS29	P62273	56 aa	Known RBP	7.11	□□□□□ -1.27
UBE2D3-231	ENST00000513098	SSBP3-AS1	Q7Z2R9	100 aa		7.11	□□□□□ -1.27
UBE2D3-231	ENST00000513098	DAND5	Q8N907	189 aa		7.11	□□□□□ -1.27
UBE2D3-231	ENST00000513098	SPANXB1	Q9NS25	103 aa	Predicted RBP	7.11	□□□□□ -1.27
UBE2D3-231	ENST00000513098	ERC2-IT1	O76042	136 aa		7.1	□□□□□ -1.27
UBE2D3-231	ENST00000513098	IGKC	P01834	107 aa		7.1	□□□□□ -1.27
UBE2D3-231	ENST00000513098	HERVK_113	P61574	105 aa		7.1	□□□□□ -1.27
UBE2D3-231	ENST00000513098		Q6ZRX8	168 aa		7.1	□□□□□ -1.27
UBE2D3-231	ENST00000513098		Q9BRP9	147 aa		7.1	□□□□□ -1.27
UBE2D3-231	ENST00000513098	COLCA2	A8K830	154 aa		7.09	□□□□□ -1.27
UBE2D3-231	ENST00000513098	KRTAP13-3	Q3SY46	172 aa		7.09	□□□□□ -1.27
UBE2D3-231	ENST00000513098	GAGE2A	Q6NT46	116 aa		7.09	□□□□□ -1.27
UBE2D3-231	ENST00000513098	FABP4	P15090	132 aa		7.08	□□□□□ -1.28
UBE2D3-231	ENST00000513098	LGALS3	P17931	250 aa	Known RBP	7.08	□□□□□ -1.28
UBE2D3-231	ENST00000513098	MIEN1	Q9BRT3	115 aa		7.08	□□□□□ -1.28
UBE2D3-231	ENST00000513098	C5orf52	A6NGY3	159 aa		7.07	□□□□□ -1.28
UBE2D3-231	ENST00000513098	JOSD1	Q15040	202 aa	Predicted RBP	7.07	□□□□□ -1.28
UBE2D3-231	ENST00000513098		A0A0J9YXY3	114 aa		7.06	□□□□□ -1.28
UBE2D3-231	ENST00000513098		E9PLD3	99 aa		7.06	□□□□□ -1.28
UBE2D3-231	ENST00000513098	ASB16-AS1	Q495Z4	193 aa		7.06	□□□□□ -1.28
UBE2D3-231	ENST00000513098	S100A7L2	Q5SY68	101 aa		7.06	□□□□□ -1.28
UBE2D3-231	ENST00000513098	ADAMTSL4-AS1	Q5T5F5	129 aa		7.06	□□□□□ -1.28
UBE2D3-231	ENST00000513098	PMCHL2	Q9BQD1	86 aa		7.06	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms