RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 TLX1NBP0CAT3 122 aa4.03□□□□□ -1.76
KDM3B-208ENST00000512928 REG3GQ6UW15 175 aa4.03□□□□□ -1.76
KDM3B-208ENST00000512928 SPINK6Q6UWN8 80 aa4.03□□□□□ -1.76
KDM3B-208ENST00000512928 Q8IZM0 81 aa4.03□□□□□ -1.76
KDM3B-208ENST00000512928 PSORS1C2Q9UIG4 136 aa4.03□□□□□ -1.76
KDM3B-208ENST00000512928 SMIM1B2RUZ4 78 aa4.02□□□□□ -1.77
KDM3B-208ENST00000512928 F8VRH5 84 aa4.02□□□□□ -1.77
KDM3B-208ENST00000512928 LEPROTL1O95214 131 aa4.02□□□□□ -1.77
KDM3B-208ENST00000512928 ZNF22P17026 224 aaPredicted RBP4.02□□□□□ -1.77
KDM3B-208ENST00000512928 LINC01545Q5VT33 79 aa4.02□□□□□ -1.77
KDM3B-208ENST00000512928 HIST3H2BBQ8N257 126 aa4.02□□□□□ -1.77
KDM3B-208ENST00000512928 COX7B2Q8TF08 81 aa4.02□□□□□ -1.77
KDM3B-208ENST00000512928 XAGE1AQ9HD64 81 aa4.02□□□□□ -1.77
KDM3B-208ENST00000512928 HSPB8Q9UJY1 196 aa4.02□□□□□ -1.77
KDM3B-208ENST00000512928 PLA2G2DQ9UNK4 145 aa4.02□□□□□ -1.77
KDM3B-208ENST00000512928 A0A1B0GV72 72 aa4.01□□□□□ -1.77
KDM3B-208ENST00000512928 C11orf86A6NJI1 115 aa4.01□□□□□ -1.77
KDM3B-208ENST00000512928 H3BRM9 83 aa4.01□□□□□ -1.77
KDM3B-208ENST00000512928 MT1HL1P0DM35 61 aa4.01□□□□□ -1.77
KDM3B-208ENST00000512928 CXCL5P42830 114 aa4.01□□□□□ -1.77
KDM3B-208ENST00000512928 C9orf129Q5T035 196 aaKnown RBP4.01□□□□□ -1.77
KDM3B-208ENST00000512928 SYS1-DBNDD2H3BUS1 97 aa4□□□□□ -1.77
KDM3B-208ENST00000512928 MTURNQ8N3F0 131 aa4□□□□□ -1.77
KDM3B-208ENST00000512928 HIST1H2BLQ99880 126 aa4□□□□□ -1.77
KDM3B-208ENST00000512928 A0A1B0GV90 55 aa3.99□□□□□ -1.77
KDM3B-208ENST00000512928 TMEM223A0PJW6 202 aa3.99□□□□□ -1.77
KDM3B-208ENST00000512928 C20orf202A1L168 122 aa3.99□□□□□ -1.77
KDM3B-208ENST00000512928 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.99□□□□□ -1.77
KDM3B-208ENST00000512928 IGLV7-43P04211 117 aa3.99□□□□□ -1.77
KDM3B-208ENST00000512928 C3orf79P0CE67 100 aa3.99□□□□□ -1.77
KDM3B-208ENST00000512928 FABP4P15090 132 aa3.99□□□□□ -1.77
KDM3B-208ENST00000512928 PLNP26678 52 aa3.99□□□□□ -1.77
KDM3B-208ENST00000512928 SRSF9Q13242 221 aaKnown RBP eCLIP3.99□□□□□ -1.77
KDM3B-208ENST00000512928 TMEM170BQ5T4T1 132 aa3.99□□□□□ -1.77
KDM3B-208ENST00000512928 KRTAP11-1Q8IUC1 163 aa3.99□□□□□ -1.77
KDM3B-208ENST00000512928 DIRC1Q969H9 104 aa3.99□□□□□ -1.77
KDM3B-208ENST00000512928 ZNF625Q96I27 306 aaPredicted RBP3.99□□□□□ -1.77
KDM3B-208ENST00000512928 LINC01600Q96MT4 127 aa3.99□□□□□ -1.77
KDM3B-208ENST00000512928 PFN2P35080 140 aa3.98□□□□□ -1.77
KDM3B-208ENST00000512928 KRTAP7-1Q8IUC3 87 aa3.98□□□□□ -1.77
KDM3B-208ENST00000512928 KRTAP9-2Q9BYQ4 174 aa3.98□□□□□ -1.77
KDM3B-208ENST00000512928 C22orf24Q9Y442 160 aa3.98□□□□□ -1.77
KDM3B-208ENST00000512928 TNXBP22105 4242 aa3.98□□□□□ -1.77
KDM3B-208ENST00000512928 GAGE10A6NGK3 116 aa3.97□□□□□ -1.77
KDM3B-208ENST00000512928 DPM2O94777 84 aa3.97□□□□□ -1.77
KDM3B-208ENST00000512928 VAMP3Q15836 100 aa3.97□□□□□ -1.77
KDM3B-208ENST00000512928 MRPL55Q7Z7F7 128 aaKnown RBP3.97□□□□□ -1.77
KDM3B-208ENST00000512928 NKAPP1Q8N9T2 125 aa3.97□□□□□ -1.77
KDM3B-208ENST00000512928 MAP1LC3CQ9BXW4 147 aa3.97□□□□□ -1.77
KDM3B-208ENST00000512928 RNF213Q63HN8 5207 aa3.96□□□□□ -1.78
KDM3B-208ENST00000512928 KRTAP9-6A0A140TA67 174 aa3.96□□□□□ -1.78
KDM3B-208ENST00000512928 RPL37AP8A6NKH3 93 aa3.96□□□□□ -1.78
KDM3B-208ENST00000512928 E9PLD3 99 aa3.96□□□□□ -1.78
KDM3B-208ENST00000512928 H0Y9J4 135 aa3.96□□□□□ -1.78
KDM3B-208ENST00000512928 IGKCP01834 107 aa3.96□□□□□ -1.78
KDM3B-208ENST00000512928 SCGB1A1P11684 91 aa3.96□□□□□ -1.78
KDM3B-208ENST00000512928 TSPEAR-AS2P59090 65 aa3.96□□□□□ -1.78
KDM3B-208ENST00000512928 JOSD1Q15040 202 aaPredicted RBP3.96□□□□□ -1.78
KDM3B-208ENST00000512928 SFTA2Q6UW10 78 aa3.96□□□□□ -1.78
KDM3B-208ENST00000512928 TSTD3H0UI37 97 aa3.95□□□□□ -1.78
KDM3B-208ENST00000512928 EIF4EBP3O60516 100 aaPredicted RBP3.95□□□□□ -1.78
KDM3B-208ENST00000512928 PRR26Q8N8Z3 221 aa3.95□□□□□ -1.78
KDM3B-208ENST00000512928 ERG28Q9UKR5 140 aa3.95□□□□□ -1.78
KDM3B-208ENST00000512928 IGKV2-28A0A075B6P5 120 aa3.94□□□□□ -1.78
KDM3B-208ENST00000512928 A0A0U1RRA0 63 aa3.94□□□□□ -1.78
KDM3B-208ENST00000512928 LEPROTO15243 131 aa3.94□□□□□ -1.78
KDM3B-208ENST00000512928 DLEU1O43261 78 aa3.94□□□□□ -1.78
KDM3B-208ENST00000512928 IGKV2D-28P01615 120 aa3.94□□□□□ -1.78
KDM3B-208ENST00000512928 RPL28P46779 137 aaKnown RBP3.94□□□□□ -1.78
KDM3B-208ENST00000512928 LINC00158P58513 81 aa3.94□□□□□ -1.78
KDM3B-208ENST00000512928 KRTAP10-8P60410 259 aa3.94□□□□□ -1.78
KDM3B-208ENST00000512928 KRTDAPP60985 99 aa3.94□□□□□ -1.78
KDM3B-208ENST00000512928 C5orf47Q569G3 176 aa3.94□□□□□ -1.78
KDM3B-208ENST00000512928 LINC00167Q96N53 147 aa3.94□□□□□ -1.78
KDM3B-208ENST00000512928 PMCHL2Q9BQD1 86 aa3.94□□□□□ -1.78
KDM3B-208ENST00000512928 SND1-IT1Q9HBX3 110 aa3.94□□□□□ -1.78
KDM3B-208ENST00000512928 TP73-AS1Q9UF72 201 aa3.94□□□□□ -1.78
KDM3B-208ENST00000512928 LRP2P98164 4655 aa3.94□□□□□ -1.78
KDM3B-208ENST00000512928 IGKV2D-26A0A0A0MRZ7 120 aa3.93□□□□□ -1.78
KDM3B-208ENST00000512928 LOC107984156A0A0G2JMH3 177 aa3.93□□□□□ -1.78
KDM3B-208ENST00000512928 ZNF861PO60384 105 aa3.93□□□□□ -1.78
KDM3B-208ENST00000512928 BCE1O60756 84 aa3.93□□□□□ -1.78
KDM3B-208ENST00000512928 NMUP48645 174 aa3.93□□□□□ -1.78
KDM3B-208ENST00000512928 UBE2AP49459 152 aa3.93□□□□□ -1.78
KDM3B-208ENST00000512928 MEIG1Q5JSS6 88 aa3.93□□□□□ -1.78
KDM3B-208ENST00000512928 ARL17AQ8IVW1 177 aa3.93□□□□□ -1.78
KDM3B-208ENST00000512928 PLEKHB2Q96CS7 222 aa3.93□□□□□ -1.78
KDM3B-208ENST00000512928 J3QQQ9 107 aa3.92□□□□□ -1.78
KDM3B-208ENST00000512928 RPL24P83731 157 aaKnown RBP3.92□□□□□ -1.78
KDM3B-208ENST00000512928 COX17Q14061 63 aa3.92□□□□□ -1.78
KDM3B-208ENST00000512928 C14orf144Q96I85 54 aa3.92□□□□□ -1.78
KDM3B-208ENST00000512928 VAMP8Q9BV40 100 aa3.92□□□□□ -1.78
KDM3B-208ENST00000512928 IGLV1-50A0A075B6I6 118 aa3.91□□□□□ -1.78
KDM3B-208ENST00000512928 IGLV5-37A0A075B6J1 123 aa3.91□□□□□ -1.78
KDM3B-208ENST00000512928 HERV-K104P63124 156 aa3.91□□□□□ -1.78
KDM3B-208ENST00000512928 LITAFQ99732 161 aa3.91□□□□□ -1.78
KDM3B-208ENST00000512928 NDUFA12Q9UI09 145 aa3.91□□□□□ -1.78
KDM3B-208ENST00000512928 KRTAP1-4P0C5Y4 121 aa3.9□□□□□ -1.79
KDM3B-208ENST00000512928 SMIM13P0DJ93 91 aa3.9□□□□□ -1.79
KDM3B-208ENST00000512928 VPREB1P12018 145 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms