RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 SVBPQ8N300 66 aa8.94□□□□□ -0.98
COL1A1-213ENST00000511732 TMEM223A0PJW6 202 aa8.93□□□□□ -0.98
COL1A1-213ENST00000511732 A0A0U1RRA0 63 aa8.92□□□□□ -0.98
COL1A1-213ENST00000511732 FAM229BQ4G0N7 80 aa8.92□□□□□ -0.98
COL1A1-213ENST00000511732 TRAV12-1A0A0B4J245 112 aa8.91□□□□□ -0.98
COL1A1-213ENST00000511732 LINC00158P58513 81 aa8.91□□□□□ -0.98
COL1A1-213ENST00000511732 NDUFA5Q16718 116 aa8.91□□□□□ -0.98
COL1A1-213ENST00000511732 SFTA2Q6UW10 78 aa8.91□□□□□ -0.98
COL1A1-213ENST00000511732 IFI27L1Q96BM0 104 aa8.91□□□□□ -0.98
COL1A1-213ENST00000511732 CHCHD1Q96BP2 118 aaKnown RBP8.91□□□□□ -0.98
COL1A1-213ENST00000511732 MUC2Q02817 5179 aa8.91□□□□□ -0.98
COL1A1-213ENST00000511732 PLEKHB2Q96CS7 222 aa8.89□□□□□ -0.99
COL1A1-213ENST00000511732 FAM19A2Q8N3H0 131 aa8.88□□□□□ -0.99
COL1A1-213ENST00000511732 LINC00304Q8N9R0 145 aa8.88□□□□□ -0.99
COL1A1-213ENST00000511732 RETNLBQ9BQ08 111 aa8.88□□□□□ -0.99
COL1A1-213ENST00000511732 SMIM13P0DJ93 91 aa8.87□□□□□ -0.99
COL1A1-213ENST00000511732 CBLN2Q8IUK8 224 aa8.87□□□□□ -0.99
COL1A1-213ENST00000511732 IGKV2D-26A0A0A0MRZ7 120 aa8.86□□□□□ -0.99
COL1A1-213ENST00000511732 C3orf22Q8N5N4 141 aa8.86□□□□□ -0.99
COL1A1-213ENST00000511732 HIGD2AQ9BW72 106 aa8.86□□□□□ -0.99
COL1A1-213ENST00000511732 HSBP1O75506 76 aa8.84□□□□□ -0.99
COL1A1-213ENST00000511732 MEIG1Q5JSS6 88 aa8.84□□□□□ -0.99
COL1A1-213ENST00000511732 MIR7-3HGQ8N6C7 128 aa8.84□□□□□ -0.99
COL1A1-213ENST00000511732 LINC00310P59036 64 aa8.83□□□□□ -1
COL1A1-213ENST00000511732 BOD1L2Q8IYS8 172 aa8.83□□□□□ -1
COL1A1-213ENST00000511732 MUC17Q685J3 4493 aa8.83□□□□□ -1
COL1A1-213ENST00000511732 NCR3O14931 201 aa8.82□□□□□ -1
COL1A1-213ENST00000511732 TRGC2P03986 189 aa8.82□□□□□ -1
COL1A1-213ENST00000511732 SPRR4Q96PI1 79 aa8.82□□□□□ -1
COL1A1-213ENST00000511732 H0Y8G0 127 aa8.81□□□□□ -1
COL1A1-213ENST00000511732 SPRR1AP35321 89 aa8.81□□□□□ -1
COL1A1-213ENST00000511732 TSPEAR-AS2P59090 65 aa8.81□□□□□ -1
COL1A1-213ENST00000511732 HERV-K104P63124 156 aa8.81□□□□□ -1
COL1A1-213ENST00000511732 NDUFA12Q9UI09 145 aa8.81□□□□□ -1
COL1A1-213ENST00000511732 KRTAP4-16G5E9R7 235 aaPredicted RBP8.8□□□□□ -1
COL1A1-213ENST00000511732 PRYO14603 147 aa8.8□□□□□ -1
COL1A1-213ENST00000511732 ATP6V1G1O75348 118 aa8.8□□□□□ -1
COL1A1-213ENST00000511732 LEPROTL1O95214 131 aa8.79□□□□□ -1
COL1A1-213ENST00000511732 KCNQ1DNQ9H478 68 aa8.79□□□□□ -1
COL1A1-213ENST00000511732 TRBV10-3A0A0K0K1G6 114 aa8.78□□□□□ -1
COL1A1-213ENST00000511732 MYMXA0A1B0GTQ4 84 aa8.78□□□□□ -1
COL1A1-213ENST00000511732 SERF1AO75920 110 aa8.78□□□□□ -1
COL1A1-213ENST00000511732 LINC00337Q8N6G1 96 aa8.78□□□□□ -1
COL1A1-213ENST00000511732 CTAG1AP78358 180 aa8.77□□□□□ -1.01
COL1A1-213ENST00000511732 DAND5Q8N907 189 aa8.77□□□□□ -1.01
COL1A1-213ENST00000511732 SMCR5Q8TEV8 140 aa8.77□□□□□ -1.01
COL1A1-213ENST00000511732 IGLV7-46A0A075B6I9 117 aa8.76□□□□□ -1.01
COL1A1-213ENST00000511732 LINC00587B1AMM8 73 aa8.76□□□□□ -1.01
COL1A1-213ENST00000511732 LEPROTO15243 131 aa8.76□□□□□ -1.01
COL1A1-213ENST00000511732 TPRXLQ17RH7 258 aa8.76□□□□□ -1.01
COL1A1-213ENST00000511732 LOC107984156A0A0G2JMH3 177 aa8.75□□□□□ -1.01
COL1A1-213ENST00000511732 ARL17AQ8IVW1 177 aa8.75□□□□□ -1.01
COL1A1-213ENST00000511732 MAP1LC3CQ9BXW4 147 aa8.75□□□□□ -1.01
COL1A1-213ENST00000511732 ZNF706Q9Y5V0 76 aaPredicted RBP8.75□□□□□ -1.01
COL1A1-213ENST00000511732 FABP4P15090 132 aa8.74□□□□□ -1.01
COL1A1-213ENST00000511732 PMCHL2Q9BQD1 86 aa8.74□□□□□ -1.01
COL1A1-213ENST00000511732 PPDPFQ9H3Y8 114 aa8.74□□□□□ -1.01
COL1A1-213ENST00000511732 ETDCA0A1B0GVM5 59 aa8.73□□□□□ -1.01
COL1A1-213ENST00000511732 J3QQQ9 107 aa8.73□□□□□ -1.01
COL1A1-213ENST00000511732 SPAG11AQ6PDA7 123 aa8.73□□□□□ -1.01
COL1A1-213ENST00000511732 SLC7A5P1Q8MH63 180 aa8.73□□□□□ -1.01
COL1A1-213ENST00000511732 CDIP1Q9H305 208 aa8.73□□□□□ -1.01
COL1A1-213ENST00000511732 B5MCH6 92 aa8.72□□□□□ -1.01
COL1A1-213ENST00000511732 PLNP26678 52 aa8.72□□□□□ -1.01
COL1A1-213ENST00000511732 COLCA2A8K830 154 aa8.71□□□□□ -1.02
COL1A1-213ENST00000511732 ERC2-IT1O76042 136 aa8.71□□□□□ -1.02
COL1A1-213ENST00000511732 DPM2O94777 84 aa8.71□□□□□ -1.02
COL1A1-213ENST00000511732 LINC00483Q53H64 154 aa8.71□□□□□ -1.02
COL1A1-213ENST00000511732 Q8NBF4 154 aa8.71□□□□□ -1.02
COL1A1-213ENST00000511732 HSPB8Q9UJY1 196 aa8.71□□□□□ -1.02
COL1A1-213ENST00000511732 TRBV10-2A0A0K0K1G8 114 aa8.7□□□□□ -1.02
COL1A1-213ENST00000511732 IGKCP01834 107 aa8.7□□□□□ -1.02
COL1A1-213ENST00000511732 DDTP30046 118 aa8.7□□□□□ -1.02
COL1A1-213ENST00000511732 A0A0U1RQV1 116 aa8.69□□□□□ -1.02
COL1A1-213ENST00000511732 GAGE2AQ6NT46 116 aa8.69□□□□□ -1.02
COL1A1-213ENST00000511732 Q9BRP9 147 aa8.69□□□□□ -1.02
COL1A1-213ENST00000511732 EIF4EBP3O60516 100 aaPredicted RBP8.68□□□□□ -1.02
COL1A1-213ENST00000511732 LGALS3P17931 250 aaKnown RBP8.68□□□□□ -1.02
COL1A1-213ENST00000511732 NMUP48645 174 aa8.68□□□□□ -1.02
COL1A1-213ENST00000511732 HERVK_113P61574 105 aa8.68□□□□□ -1.02
COL1A1-213ENST00000511732 C4orf48Q5BLP8 95 aa8.68□□□□□ -1.02
COL1A1-213ENST00000511732 SOSTDC1Q6X4U4 206 aa8.68□□□□□ -1.02
COL1A1-213ENST00000511732 S100A12P80511 92 aa8.67□□□□□ -1.02
COL1A1-213ENST00000511732 ADAMTSL4-AS1Q5T5F5 129 aa8.67□□□□□ -1.02
COL1A1-213ENST00000511732 SPANXB1Q9NS25 103 aaPredicted RBP8.67□□□□□ -1.02
COL1A1-213ENST00000511732 NDUFC2O95298 119 aa8.66□□□□□ -1.02
COL1A1-213ENST00000511732 IGLV6-57P01721 117 aa8.66□□□□□ -1.02
COL1A1-213ENST00000511732 NPC2P61916 151 aa8.66□□□□□ -1.02
COL1A1-213ENST00000511732 LCE2AQ5TA79 106 aaPredicted RBP8.66□□□□□ -1.02
COL1A1-213ENST00000511732 Q6ZRX8 168 aa8.66□□□□□ -1.02
COL1A1-213ENST00000511732 FAT4Q6V0I7 4981 aa8.66□□□□□ -1.02
COL1A1-213ENST00000511732 A0A0J9YXY3 114 aa8.65□□□□□ -1.02
COL1A1-213ENST00000511732 FP248Q71RG6 208 aaPredicted RBP8.65□□□□□ -1.02
COL1A1-213ENST00000511732 MIEN1Q9BRT3 115 aa8.65□□□□□ -1.02
COL1A1-213ENST00000511732 IGLV9-49A0A0B4J1Y8 123 aa8.64□□□□□ -1.03
COL1A1-213ENST00000511732 E9PLD3 99 aa8.64□□□□□ -1.03
COL1A1-213ENST00000511732 SPINK1P00995 79 aa8.64□□□□□ -1.03
COL1A1-213ENST00000511732 MOBPQ13875 183 aa8.64□□□□□ -1.03
COL1A1-213ENST00000511732 KRTAP13-3Q3SY46 172 aa8.63□□□□□ -1.03
COL1A1-213ENST00000511732 S100A7L2Q5SY68 101 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms