RNA–Protein interactions for RNA: ENST00000511649.5

RAB28-207, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 5

Gene RAB28, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-207ENST00000511649 MAP1LC3AQ9H492 121 aa3.7□□□□□ -1.82
RAB28-207ENST00000511649 CARHSP1Q9Y2V2 147 aaKnown RBP3.7□□□□□ -1.82
RAB28-207ENST00000511649 LINC01546A6NGU7 62 aa3.69□□□□□ -1.82
RAB28-207ENST00000511649 F8VRH5 84 aa3.69□□□□□ -1.82
RAB28-207ENST00000511649 S100A8P05109 93 aa3.69□□□□□ -1.82
RAB28-207ENST00000511649 SPINK8P0C7L1 97 aa3.69□□□□□ -1.82
RAB28-207ENST00000511649 VPREB1P12018 145 aa3.69□□□□□ -1.82
RAB28-207ENST00000511649 Q6ZN92 141 aa3.69□□□□□ -1.82
RAB28-207ENST00000511649 PACRGQ96M98 296 aaPredicted RBP3.69□□□□□ -1.82
RAB28-207ENST00000511649 TIMM17AQ99595 171 aa3.69□□□□□ -1.82
RAB28-207ENST00000511649 ALKBH7Q9BT30 221 aaPredicted RBP3.69□□□□□ -1.82
RAB28-207ENST00000511649 VCX2Q9H322 139 aa3.69□□□□□ -1.82
RAB28-207ENST00000511649 TP73-AS1Q9UF72 201 aa3.69□□□□□ -1.82
RAB28-207ENST00000511649 LAMTOR2Q9Y2Q5 125 aa3.69□□□□□ -1.82
RAB28-207ENST00000511649 IGLV9-49A0A0B4J1Y8 123 aa3.68□□□□□ -1.82
RAB28-207ENST00000511649 TMEM238C9JI98 176 aa3.68□□□□□ -1.82
RAB28-207ENST00000511649 NUPR1O60356 82 aa3.68□□□□□ -1.82
RAB28-207ENST00000511649 RPL13AP40429 203 aaKnown RBP3.68□□□□□ -1.82
RAB28-207ENST00000511649 PRLHP81277 87 aa3.68□□□□□ -1.82
RAB28-207ENST00000511649 ORMDL2Q53FV1 153 aa3.68□□□□□ -1.82
RAB28-207ENST00000511649 C3orf22Q8N5N4 141 aa3.68□□□□□ -1.82
RAB28-207ENST00000511649 C2orf88Q9BSF0 95 aa3.68□□□□□ -1.82
RAB28-207ENST00000511649 IGKV2-28A0A075B6P5 120 aa3.67□□□□□ -1.82
RAB28-207ENST00000511649 IGKV2D-28P01615 120 aa3.67□□□□□ -1.82
RAB28-207ENST00000511649 CKS1BP61024 79 aa3.67□□□□□ -1.82
RAB28-207ENST00000511649 HERVK_113P63121 156 aa3.67□□□□□ -1.82
RAB28-207ENST00000511649 C6orf226Q5I0X4 101 aa3.67□□□□□ -1.82
RAB28-207ENST00000511649 COX7B2Q8TF08 81 aa3.67□□□□□ -1.82
RAB28-207ENST00000511649 CST9LQ9H4G1 147 aa3.67□□□□□ -1.82
RAB28-207ENST00000511649 TINCRA0A1B0GVN0 87 aa3.66□□□□□ -1.82
RAB28-207ENST00000511649 M0R378 163 aa3.66□□□□□ -1.82
RAB28-207ENST00000511649 RAB5BP61020 215 aa3.66□□□□□ -1.82
RAB28-207ENST00000511649 IFITM2Q01629 132 aa3.66□□□□□ -1.82
RAB28-207ENST00000511649 PDZD11Q5EBL8 140 aa3.66□□□□□ -1.82
RAB28-207ENST00000511649 NXT2Q9NPJ8 142 aaKnown RBP3.66□□□□□ -1.82
RAB28-207ENST00000511649 IGLC3P0DOY3 106 aa3.65□□□□□ -1.83
RAB28-207ENST00000511649 CRYGAP11844 174 aa3.65□□□□□ -1.83
RAB28-207ENST00000511649 ZNF22P17026 224 aaPredicted RBP3.65□□□□□ -1.83
RAB28-207ENST00000511649 RPL28P46779 137 aaKnown RBP3.65□□□□□ -1.83
RAB28-207ENST00000511649 ERASQ7Z444 233 aa3.65□□□□□ -1.83
RAB28-207ENST00000511649 TYMSOSQ8TAI1 123 aa3.65□□□□□ -1.83
RAB28-207ENST00000511649 SCGB3A1Q96QR1 104 aa3.65□□□□□ -1.83
RAB28-207ENST00000511649 K7EMI3 77 aa3.64□□□□□ -1.83
RAB28-207ENST00000511649 MT-ND4LP03901 98 aa3.64□□□□□ -1.83
RAB28-207ENST00000511649 CXCL5P42830 114 aa3.64□□□□□ -1.83
RAB28-207ENST00000511649 PMCHL1Q16048 86 aa3.64□□□□□ -1.83
RAB28-207ENST00000511649 LBHQ53QV2 105 aaPredicted RBP3.64□□□□□ -1.83
RAB28-207ENST00000511649 ADAMTSL4-AS1Q5T5F5 129 aa3.64□□□□□ -1.83
RAB28-207ENST00000511649 LINC00304Q8N9R0 145 aa3.64□□□□□ -1.83
RAB28-207ENST00000511649 PRAC1Q96KF2 57 aa3.64□□□□□ -1.83
RAB28-207ENST00000511649 TMEM126AQ9H061 195 aa3.64□□□□□ -1.83
RAB28-207ENST00000511649 GEMIN7Q9H840 131 aaKnown RBP3.64□□□□□ -1.83
RAB28-207ENST00000511649 SND1-IT1Q9HBX3 110 aa3.64□□□□□ -1.83
RAB28-207ENST00000511649 FSIP2Q5CZC0 6907 aa3.63□□□□□ -1.83
RAB28-207ENST00000511649 C11orf86A6NJI1 115 aa3.63□□□□□ -1.83
RAB28-207ENST00000511649 PFN2P35080 140 aa3.63□□□□□ -1.83
RAB28-207ENST00000511649 TPRXLQ17RH7 258 aa3.63□□□□□ -1.83
RAB28-207ENST00000511649 FAM229BQ4G0N7 80 aa3.63□□□□□ -1.83
RAB28-207ENST00000511649 PLEKHB2Q96CS7 222 aa3.63□□□□□ -1.83
RAB28-207ENST00000511649 ZNF625Q96I27 306 aaPredicted RBP3.63□□□□□ -1.83
RAB28-207ENST00000511649 TMEM218A2RU14 115 aa3.62□□□□□ -1.83
RAB28-207ENST00000511649 UBE2AP49459 152 aa3.62□□□□□ -1.83
RAB28-207ENST00000511649 KRTAP10-12P60413 245 aa3.62□□□□□ -1.83
RAB28-207ENST00000511649 PMVKQ15126 192 aa3.62□□□□□ -1.83
RAB28-207ENST00000511649 KRTAP19-2Q3LHN2 52 aa3.62□□□□□ -1.83
RAB28-207ENST00000511649 CLLU1Q5K131 121 aa3.62□□□□□ -1.83
RAB28-207ENST00000511649 IGLV7-46A0A075B6I9 117 aa3.61□□□□□ -1.83
RAB28-207ENST00000511649 KRTAP4-16G5E9R7 235 aaPredicted RBP3.61□□□□□ -1.83
RAB28-207ENST00000511649 KRTAP10-5P60370 271 aa3.61□□□□□ -1.83
RAB28-207ENST00000511649 SEC11AP67812 179 aa3.61□□□□□ -1.83
RAB28-207ENST00000511649 KRTAP13-3Q3SY46 172 aa3.61□□□□□ -1.83
RAB28-207ENST00000511649 FAM19A1Q7Z5A9 133 aa3.61□□□□□ -1.83
RAB28-207ENST00000511649 C18orf32Q8TCD1 76 aa3.61□□□□□ -1.83
RAB28-207ENST00000511649 GNB1LQ9BYB4 327 aa3.61□□□□□ -1.83
RAB28-207ENST00000511649 ERG28Q9UKR5 140 aa3.61□□□□□ -1.83
RAB28-207ENST00000511649 C10orf91Q5T1B1 145 aa3.6□□□□□ -1.83
RAB28-207ENST00000511649 DAND5Q8N907 189 aa3.6□□□□□ -1.83
RAB28-207ENST00000511649 NKAPP1Q8N9T2 125 aa3.6□□□□□ -1.83
RAB28-207ENST00000511649 SPRR4Q96PI1 79 aa3.6□□□□□ -1.83
RAB28-207ENST00000511649 PPDPFQ9H3Y8 114 aa3.6□□□□□ -1.83
RAB28-207ENST00000511649 TRAV9-1A0A075B6T8 112 aa3.59□□□□□ -1.83
RAB28-207ENST00000511649 ATP5LO75964 103 aa3.59□□□□□ -1.83
RAB28-207ENST00000511649 ERC2-IT1O76042 136 aa3.59□□□□□ -1.83
RAB28-207ENST00000511649 TSPEAR-AS2P59090 65 aa3.59□□□□□ -1.83
RAB28-207ENST00000511649 RAB14P61106 215 aa3.59□□□□□ -1.83
RAB28-207ENST00000511649 SMCR5Q8TEV8 140 aa3.59□□□□□ -1.83
RAB28-207ENST00000511649 A0A0U1RRA0 63 aa3.58□□□□□ -1.84
RAB28-207ENST00000511649 NDUFAF8A1L188 74 aa3.58□□□□□ -1.84
RAB28-207ENST00000511649 KRTAP16-1A8MUX0 517 aa3.58□□□□□ -1.84
RAB28-207ENST00000511649 SPRR1AP35321 89 aa3.58□□□□□ -1.84
RAB28-207ENST00000511649 FABP9Q0Z7S8 132 aa3.58□□□□□ -1.84
RAB28-207ENST00000511649 FA2HQ7L5A8 372 aa3.58□□□□□ -1.84
RAB28-207ENST00000511649 Q8NBF4 154 aa3.58□□□□□ -1.84
RAB28-207ENST00000511649 YPEL4Q96NS1 127 aa3.58□□□□□ -1.84
RAB28-207ENST00000511649 HIGD2AQ9BW72 106 aa3.58□□□□□ -1.84
RAB28-207ENST00000511649 IGKV2D-26A0A0A0MRZ7 120 aa3.57□□□□□ -1.84
RAB28-207ENST00000511649 TMEM223A0PJW6 202 aa3.57□□□□□ -1.84
RAB28-207ENST00000511649 NCR3O14931 201 aa3.57□□□□□ -1.84
RAB28-207ENST00000511649 UQCC3Q6UW78 93 aa3.57□□□□□ -1.84
RAB28-207ENST00000511649 COMMD7Q86VX2 200 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms