RNA–Protein interactions for RNA: ENST00000511249.5

MATR3-216, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-216ENST00000511249 PCNX2A6NKB5 2137 aa2.57□□□□□ -2
MATR3-216ENST00000511249 MALRD1Q5VYJ5 2156 aa2.57□□□□□ -2
MATR3-216ENST00000511249 CASC2Q6XLA1 102 aa2.57□□□□□ -2
MATR3-216ENST00000511249 DIDO1Q9BTC0 2240 aaKnown RBP2.57□□□□□ -2
MATR3-216ENST00000511249 TRBV6-4A0A1B0GX49 114 aa2.56□□□□□ -2
MATR3-216ENST00000511249 CDKN2A-AS1Q9UH64 79 aa2.56□□□□□ -2
MATR3-216ENST00000511249 TNCP24821 2201 aa2.56□□□□□ -2
MATR3-216ENST00000511249 RTTNQ86VV8 2226 aa2.56□□□□□ -2
MATR3-216ENST00000511249 IGKV4-1P06312 121 aa2.55□□□□□ -2
MATR3-216ENST00000511249 ARHGAP32A7KAX9 2087 aa2.54□□□□□ -2
MATR3-216ENST00000511249 IGLV3-9A0A075B6K5 115 aa2.54□□□□□ -2
MATR3-216ENST00000511249 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.54□□□□□ -2
MATR3-216ENST00000511249 IGKV2-24A0A0C4DH68 120 aa2.54□□□□□ -2
MATR3-216ENST00000511249 TFF1P04155 84 aa2.54□□□□□ -2
MATR3-216ENST00000511249 LINC00208Q96KT6 92 aa2.54□□□□□ -2
MATR3-216ENST00000511249 C20orf166-AS1Q96NR2 134 aa2.54□□□□□ -2
MATR3-216ENST00000511249 PRR15LQ9BU68 103 aa2.54□□□□□ -2
MATR3-216ENST00000511249 PRO2289Q9P1D8 64 aa2.54□□□□□ -2
MATR3-216ENST00000511249 CUL9Q8IWT3 2517 aa2.54□□□□□ -2
MATR3-216ENST00000511249 RP1P56715 2156 aa2.54□□□□□ -2
MATR3-216ENST00000511249 FREM1Q5H8C1 2179 aa2.54□□□□□ -2
MATR3-216ENST00000511249 ARFGEF3Q5TH69 2177 aa2.53□□□□□ -2
MATR3-216ENST00000511249 ETDCA0A1B0GVM5 59 aa2.53□□□□□ -2
MATR3-216ENST00000511249 COX7BP24311 80 aa2.53□□□□□ -2
MATR3-216ENST00000511249 CCL18P55774 89 aa2.53□□□□□ -2
MATR3-216ENST00000511249 Q6ZTI0 123 aa2.53□□□□□ -2
MATR3-216ENST00000511249 LINC01558Q9Y6Z2 57 aa2.53□□□□□ -2
MATR3-216ENST00000511249 TRGV2A0A075B6R0 118 aa2.52□□□□□ -2.01
MATR3-216ENST00000511249 LINC00575Q6W349 94 aa2.52□□□□□ -2.01
MATR3-216ENST00000511249 LINC00304Q8N9R0 145 aa2.52□□□□□ -2.01
MATR3-216ENST00000511249 COX7B2Q8TF08 81 aa2.52□□□□□ -2.01
MATR3-216ENST00000511249 KCNQ1DNQ9H478 68 aa2.52□□□□□ -2.01
MATR3-216ENST00000511249 PLAC8Q9NZF1 115 aa2.52□□□□□ -2.01
MATR3-216ENST00000511249 KAAG1Q9UBP8 84 aa2.52□□□□□ -2.01
MATR3-216ENST00000511249 NAV3Q8IVL0 2385 aa2.52□□□□□ -2.01
MATR3-216ENST00000511249 PDE4DIPQ5VU43 2346 aa2.52□□□□□ -2.01
MATR3-216ENST00000511249 ZFHX3Q15911 3703 aa2.52□□□□□ -2.01
MATR3-216ENST00000511249 CLPSL1A2RUU4 121 aa2.51□□□□□ -2.01
MATR3-216ENST00000511249 NDUFA4O00483 81 aa2.51□□□□□ -2.01
MATR3-216ENST00000511249 PRB2P02812 416 aaPredicted RBP2.51□□□□□ -2.01
MATR3-216ENST00000511249 CNBPP62633 177 aaKnown RBP2.51□□□□□ -2.01
MATR3-216ENST00000511249 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.51□□□□□ -2.01
MATR3-216ENST00000511249 A0A096LNT2 108 aa2.5□□□□□ -2.01
MATR3-216ENST00000511249 SPRR5A0A1B0GTR4 108 aa2.5□□□□□ -2.01
MATR3-216ENST00000511249 CCL3L1P16619 93 aa2.5□□□□□ -2.01
MATR3-216ENST00000511249 LINC00158P58513 81 aa2.5□□□□□ -2.01
MATR3-216ENST00000511249 COX17Q14061 63 aa2.5□□□□□ -2.01
MATR3-216ENST00000511249 RETNLBQ9BQ08 111 aa2.5□□□□□ -2.01
MATR3-216ENST00000511249 LINC00467Q9BRT7 94 aa2.5□□□□□ -2.01
MATR3-216ENST00000511249 PRRC2BQ5JSZ5 2229 aaKnown RBP2.5□□□□□ -2.01
MATR3-216ENST00000511249 P0C880 135 aa2.49□□□□□ -2.01
MATR3-216ENST00000511249 APELAP0DMC3 54 aa2.49□□□□□ -2.01
MATR3-216ENST00000511249 MINOS1Q5TGZ0 78 aa2.49□□□□□ -2.01
MATR3-216ENST00000511249 ZGRF1Q86YA3 2104 aa2.49□□□□□ -2.01
MATR3-216ENST00000511249 FDCSPQ8NFU4 85 aa2.49□□□□□ -2.01
MATR3-216ENST00000511249 WFDC10AQ9H1F0 79 aa2.49□□□□□ -2.01
MATR3-216ENST00000511249 PCNTO95613 3336 aa2.49□□□□□ -2.01
MATR3-216ENST00000511249 A0A0G2JQZ4 141 aa2.48□□□□□ -2.01
MATR3-216ENST00000511249 PRB4P10163 310 aaPredicted RBP2.48□□□□□ -2.01
MATR3-216ENST00000511249 COX6A2Q02221 97 aa2.48□□□□□ -2.01
MATR3-216ENST00000511249 C9orf163Q8N9P6 203 aa2.48□□□□□ -2.01
MATR3-216ENST00000511249 TTTY12Q9BZ98 90 aa2.48□□□□□ -2.01
MATR3-216ENST00000511249 SRCAPQ6ZRS2 3230 aa2.48□□□□□ -2.01
MATR3-216ENST00000511249 BRWD1Q9NSI6 2320 aa2.47□□□□□ -2.01
MATR3-216ENST00000511249 TPRXLQ17RH7 258 aa2.47□□□□□ -2.01
MATR3-216ENST00000511249 DEFB133Q30KQ1 61 aa2.47□□□□□ -2.01
MATR3-216ENST00000511249 Q8IZM0 81 aa2.47□□□□□ -2.01
MATR3-216ENST00000511249 DEFB108BQ8NET1 73 aa2.47□□□□□ -2.01
MATR3-216ENST00000511249 GOLGB1Q14789 3259 aaKnown RBP2.47□□□□□ -2.01
MATR3-216ENST00000511249 H3BUA1 57 aa2.46□□□□□ -2.02
MATR3-216ENST00000511249 M0R2N4 97 aa2.46□□□□□ -2.02
MATR3-216ENST00000511249 IGLV1-51P01701 117 aa2.46□□□□□ -2.02
MATR3-216ENST00000511249 SPAG11BQ08648 103 aa2.46□□□□□ -2.02
MATR3-216ENST00000511249 CADP27708 2225 aa2.46□□□□□ -2.02
MATR3-216ENST00000511249 DOCK10Q96BY6 2186 aa2.46□□□□□ -2.02
MATR3-216ENST00000511249 PI4KAP42356 2102 aa2.45□□□□□ -2.02
MATR3-216ENST00000511249 SDK2Q58EX2 2172 aa2.45□□□□□ -2.02
MATR3-216ENST00000511249 H0Y9P7 68 aa2.45□□□□□ -2.02
MATR3-216ENST00000511249 DEFB103AP81534 67 aa2.45□□□□□ -2.02
MATR3-216ENST00000511249 Q6ZQY7 126 aa2.45□□□□□ -2.02
MATR3-216ENST00000511249 COA5Q86WW8 74 aa2.45□□□□□ -2.02
MATR3-216ENST00000511249 CENPFP49454 3210 aa2.45□□□□□ -2.02
MATR3-216ENST00000511249 MUC4Q99102 2169 aa2.44□□□□□ -2.02
MATR3-216ENST00000511249 MED13Q9UHV7 2174 aa2.44□□□□□ -2.02
MATR3-216ENST00000511249 CNTRLQ7Z7A1 2325 aa2.44□□□□□ -2.02
MATR3-216ENST00000511249 A8MTW9 85 aa2.44□□□□□ -2.02
MATR3-216ENST00000511249 DEFB104AQ8WTQ1 72 aa2.44□□□□□ -2.02
MATR3-216ENST00000511249 IGLV5-48A0A075B6I7 105 aa2.43□□□□□ -2.02
MATR3-216ENST00000511249 TRGV4A0A0C4DH28 118 aa2.43□□□□□ -2.02
MATR3-216ENST00000511249 B4DSR2 109 aa2.43□□□□□ -2.02
MATR3-216ENST00000511249 ROMO1P60602 79 aa2.43□□□□□ -2.02
MATR3-216ENST00000511249 USMG5Q96IX5 58 aa2.43□□□□□ -2.02
MATR3-216ENST00000511249 TOMM7Q9P0U1 55 aa2.43□□□□□ -2.02
MATR3-216ENST00000511249 F5P12259 2224 aa2.43□□□□□ -2.02
MATR3-216ENST00000511249 SPAG11AQ6PDA7 123 aa2.42□□□□□ -2.02
MATR3-216ENST00000511249 SPACA4Q8TDM5 124 aa2.42□□□□□ -2.02
MATR3-216ENST00000511249 SPINK7P58062 85 aa2.41□□□□□ -2.02
MATR3-216ENST00000511249 DEFB112Q30KQ8 113 aa2.41□□□□□ -2.02
MATR3-216ENST00000511249 C1orf134Q5TEV5 83 aa2.41□□□□□ -2.02
MATR3-216ENST00000511249 SPATA8Q6RVD6 105 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms