RNA–Protein interactions for RNA: ENST00000511019.1

TRIO-217, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 430 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-217ENST00000511019 SPAG11AQ6PDA7 123 aa4.81□□□□□ -1.64
TRIO-217ENST00000511019 PLEKHB2Q96CS7 222 aa4.81□□□□□ -1.64
TRIO-217ENST00000511019 ERG28Q9UKR5 140 aa4.81□□□□□ -1.64
TRIO-217ENST00000511019 M0R378 163 aa4.8□□□□□ -1.64
TRIO-217ENST00000511019 COX19Q49B96 90 aa4.8□□□□□ -1.64
TRIO-217ENST00000511019 CBLN2Q8IUK8 224 aa4.8□□□□□ -1.64
TRIO-217ENST00000511019 ZNF625Q96I27 306 aaPredicted RBP4.8□□□□□ -1.64
TRIO-217ENST00000511019 PPDPFQ9H3Y8 114 aa4.8□□□□□ -1.64
TRIO-217ENST00000511019 IGLV5-39A0A0G2JS06 123 aa4.79□□□□□ -1.64
TRIO-217ENST00000511019 IGLC3P0DOY3 106 aa4.79□□□□□ -1.64
TRIO-217ENST00000511019 FABP9Q0Z7S8 132 aa4.79□□□□□ -1.64
TRIO-217ENST00000511019 CLLU1Q5K131 121 aa4.79□□□□□ -1.64
TRIO-217ENST00000511019 C3orf22Q8N5N4 141 aa4.79□□□□□ -1.64
TRIO-217ENST00000511019 HIGD2AQ9BW72 106 aa4.79□□□□□ -1.64
TRIO-217ENST00000511019 TMEM218A2RU14 115 aa4.78□□□□□ -1.64
TRIO-217ENST00000511019 ZNF22P17026 224 aaPredicted RBP4.78□□□□□ -1.64
TRIO-217ENST00000511019 SFTA2Q6UW10 78 aa4.78□□□□□ -1.64
TRIO-217ENST00000511019 UQCC3Q6UW78 93 aa4.78□□□□□ -1.64
TRIO-217ENST00000511019 LINC00337Q8N6G1 96 aa4.78□□□□□ -1.64
TRIO-217ENST00000511019 LINC00614P0C842 121 aa4.77□□□□□ -1.65
TRIO-217ENST00000511019 LINC00158P58513 81 aa4.77□□□□□ -1.65
TRIO-217ENST00000511019 TMEM170BQ5T4T1 132 aa4.77□□□□□ -1.65
TRIO-217ENST00000511019 BAGE3Q86Y29 109 aa4.77□□□□□ -1.65
TRIO-217ENST00000511019 FP248Q71RG6 208 aaPredicted RBP4.76□□□□□ -1.65
TRIO-217ENST00000511019 Q8NDZ9 215 aa4.76□□□□□ -1.65
TRIO-217ENST00000511019 SPRR4Q96PI1 79 aa4.76□□□□□ -1.65
TRIO-217ENST00000511019 SEC11CQ9BY50 192 aa4.76□□□□□ -1.65
TRIO-217ENST00000511019 ZNF706Q9Y5V0 76 aaPredicted RBP4.76□□□□□ -1.65
TRIO-217ENST00000511019 FAT4Q6V0I7 4981 aa4.76□□□□□ -1.65
TRIO-217ENST00000511019 A0A0U1RRA0 63 aa4.75□□□□□ -1.65
TRIO-217ENST00000511019 KRTAP9-6A0A140TA67 174 aa4.75□□□□□ -1.65
TRIO-217ENST00000511019 ATP6V1G1O75348 118 aa4.75□□□□□ -1.65
TRIO-217ENST00000511019 HBDP02042 147 aa4.75□□□□□ -1.65
TRIO-217ENST00000511019 A0A096LNJ9 63 aa4.74□□□□□ -1.65
TRIO-217ENST00000511019 C11orf86A6NJI1 115 aa4.74□□□□□ -1.65
TRIO-217ENST00000511019 DAND5Q8N907 189 aa4.74□□□□□ -1.65
TRIO-217ENST00000511019 SMCR5Q8TEV8 140 aa4.74□□□□□ -1.65
TRIO-217ENST00000511019 URB1-AS1Q96HZ7 61 aa4.74□□□□□ -1.65
TRIO-217ENST00000511019 TRAPPC1Q9Y5R8 145 aa4.74□□□□□ -1.65
TRIO-217ENST00000511019 SPINK1P00995 79 aa4.73□□□□□ -1.65
TRIO-217ENST00000511019 PMCHL1Q16048 86 aa4.73□□□□□ -1.65
TRIO-217ENST00000511019 Q8NBF4 154 aa4.73□□□□□ -1.65
TRIO-217ENST00000511019 C18orf32Q8TCD1 76 aa4.73□□□□□ -1.65
TRIO-217ENST00000511019 RPS10P5Q9NQ39 176 aa4.73□□□□□ -1.65
TRIO-217ENST00000511019 CHTOPQ9Y3Y2 248 aaKnown RBP4.73□□□□□ -1.65
TRIO-217ENST00000511019 MUC17Q685J3 4493 aa4.72□□□□□ -1.65
TRIO-217ENST00000511019 LINC01547P58512 204 aaPredicted RBP4.72□□□□□ -1.65
TRIO-217ENST00000511019 S100A12P80511 92 aa4.72□□□□□ -1.65
TRIO-217ENST00000511019 KRTAP13-3Q3SY46 172 aa4.72□□□□□ -1.65
TRIO-217ENST00000511019 BOD1L2Q8IYS8 172 aa4.72□□□□□ -1.65
TRIO-217ENST00000511019 ETDCA0A1B0GVM5 59 aa4.71□□□□□ -1.66
TRIO-217ENST00000511019 TMEM223A0PJW6 202 aa4.71□□□□□ -1.66
TRIO-217ENST00000511019 LINC00587B1AMM8 73 aa4.71□□□□□ -1.66
TRIO-217ENST00000511019 PRYO14603 147 aa4.71□□□□□ -1.66
TRIO-217ENST00000511019 SMIM13P0DJ93 91 aa4.71□□□□□ -1.66
TRIO-217ENST00000511019 SPRR1AP35321 89 aa4.71□□□□□ -1.66
TRIO-217ENST00000511019 RHEBQ15382 184 aa4.71□□□□□ -1.66
TRIO-217ENST00000511019 ASB16-AS1Q495Z4 193 aa4.71□□□□□ -1.66
TRIO-217ENST00000511019 MEIG1Q5JSS6 88 aa4.71□□□□□ -1.66
TRIO-217ENST00000511019 KRTAP4-12Q9BQ66 201 aa4.71□□□□□ -1.66
TRIO-217ENST00000511019 KCNQ1DNQ9H478 68 aa4.71□□□□□ -1.66
TRIO-217ENST00000511019 NCR3O14931 201 aa4.7□□□□□ -1.66
TRIO-217ENST00000511019 SEC61BP60468 96 aaKnown RBP4.7□□□□□ -1.66
TRIO-217ENST00000511019 HERV-K104P63124 156 aa4.7□□□□□ -1.66
TRIO-217ENST00000511019 GAGE2AQ6NT46 116 aa4.7□□□□□ -1.66
TRIO-217ENST00000511019 SSBP3-AS1Q7Z2R9 100 aa4.7□□□□□ -1.66
TRIO-217ENST00000511019 MIR7-3HGQ8N6C7 128 aa4.7□□□□□ -1.66
TRIO-217ENST00000511019 TRAV12-1A0A0B4J245 112 aa4.69□□□□□ -1.66
TRIO-217ENST00000511019 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.69□□□□□ -1.66
TRIO-217ENST00000511019 C10orf91Q5T1B1 145 aa4.69□□□□□ -1.66
TRIO-217ENST00000511019 IFI27L1Q96BM0 104 aa4.69□□□□□ -1.66
TRIO-217ENST00000511019 MAP1LC3CQ9BXW4 147 aa4.69□□□□□ -1.66
TRIO-217ENST00000511019 NDUFA12Q9UI09 145 aa4.69□□□□□ -1.66
TRIO-217ENST00000511019 TRBV10-3A0A0K0K1G6 114 aa4.68□□□□□ -1.66
TRIO-217ENST00000511019 MYMXA0A1B0GTQ4 84 aa4.68□□□□□ -1.66
TRIO-217ENST00000511019 KRTAP4-16G5E9R7 235 aaPredicted RBP4.68□□□□□ -1.66
TRIO-217ENST00000511019 IFITM2Q01629 132 aa4.68□□□□□ -1.66
TRIO-217ENST00000511019 LINC00483Q53H64 154 aa4.68□□□□□ -1.66
TRIO-217ENST00000511019 COMMD7Q86VX2 200 aa4.68□□□□□ -1.66
TRIO-217ENST00000511019 IGLV9-49A0A0B4J1Y8 123 aa4.67□□□□□ -1.66
TRIO-217ENST00000511019 B5MCH6 92 aa4.67□□□□□ -1.66
TRIO-217ENST00000511019 SLC25A20O43772 301 aa4.67□□□□□ -1.66
TRIO-217ENST00000511019 RPS29P62273 56 aaKnown RBP4.67□□□□□ -1.66
TRIO-217ENST00000511019 MOBPQ13875 183 aa4.67□□□□□ -1.66
TRIO-217ENST00000511019 CHCHD1Q96BP2 118 aaKnown RBP4.67□□□□□ -1.66
TRIO-217ENST00000511019 KRTAP19-1Q8IUB9 90 aa4.66□□□□□ -1.66
TRIO-217ENST00000511019 Q8N377 158 aa4.66□□□□□ -1.66
TRIO-217ENST00000511019 FAM19A2Q8N3H0 131 aa4.66□□□□□ -1.66
TRIO-217ENST00000511019 ERC2-IT1O76042 136 aa4.65□□□□□ -1.67
TRIO-217ENST00000511019 DDTP30046 118 aa4.65□□□□□ -1.67
TRIO-217ENST00000511019 KRTAP4-1Q9BYQ7 146 aa4.65□□□□□ -1.67
TRIO-217ENST00000511019 LOC107984156A0A0G2JMH3 177 aa4.64□□□□□ -1.67
TRIO-217ENST00000511019 TRBV10-2A0A0K0K1G8 114 aa4.64□□□□□ -1.67
TRIO-217ENST00000511019 C9orf118A6NHY6 69 aa4.64□□□□□ -1.67
TRIO-217ENST00000511019 HSBP1O75506 76 aa4.64□□□□□ -1.67
TRIO-217ENST00000511019 ARL17AQ8IVW1 177 aa4.64□□□□□ -1.67
TRIO-217ENST00000511019 LEPROTO15243 131 aa4.63□□□□□ -1.67
TRIO-217ENST00000511019 APOC3P02656 99 aa4.63□□□□□ -1.67
TRIO-217ENST00000511019 JOSD1Q15040 202 aaPredicted RBP4.63□□□□□ -1.67
TRIO-217ENST00000511019 S100A7L2Q5SY68 101 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms