RNA–Protein interactions for RNA: ENST00000510557.5

LIN54-209, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 2 BASIC

Gene LIN54, Length 2,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-209ENST00000510557 HAMPP81172 84 aa13.11□□□□□ -0.31
LIN54-209ENST00000510557 C9orf66Q5T8R8 295 aa13.11□□□□□ -0.31
LIN54-209ENST00000510557 CLPSL2Q6UWE3 100 aa13.11□□□□□ -0.31
LIN54-209ENST00000510557 CCDC168Q8NDH2 2452 aa13.11□□□□□ -0.31
LIN54-209ENST00000510557 LINC00269Q8N2A0 174 aa13.11□□□□□ -0.31
LIN54-209ENST00000510557 A0A096LPF7 62 aa13.1□□□□□ -0.31
LIN54-209ENST00000510557 ZNF561-AS1K7EIQ3 104 aa13.1□□□□□ -0.31
LIN54-209ENST00000510557 IGHV4-28A0A0C4DH34 117 aa13.1□□□□□ -0.31
LIN54-209ENST00000510557 NDUFC1O43677 76 aa13.1□□□□□ -0.31
LIN54-209ENST00000510557 Q6ZVQ6 151 aa13.09□□□□□ -0.31
LIN54-209ENST00000510557 CHCHD10Q8WYQ3 142 aaPredicted RBP13.09□□□□□ -0.31
LIN54-209ENST00000510557 APOC4P55056 127 aa13.09□□□□□ -0.31
LIN54-209ENST00000510557 KIAA0087Q14695 138 aa13.09□□□□□ -0.31
LIN54-209ENST00000510557 ATP5EP56381 51 aaPredicted RBP13.08□□□□□ -0.32
LIN54-209ENST00000510557 NBPF19A0A087WUL8 3843 aa13.08□□□□□ -0.32
LIN54-209ENST00000510557 REG3AQ06141 175 aa13.08□□□□□ -0.32
LIN54-209ENST00000510557 C6orf99Q4VX62 202 aa13.08□□□□□ -0.32
LIN54-209ENST00000510557 LAMTOR3Q9UHA4 124 aa13.08□□□□□ -0.32
LIN54-209ENST00000510557 ANGP03950 147 aaKnown RBP13.07□□□□□ -0.32
LIN54-209ENST00000510557 CXCL6P80162 114 aa13.07□□□□□ -0.32
LIN54-209ENST00000510557 LINC00575Q6W349 94 aa13.07□□□□□ -0.32
LIN54-209ENST00000510557 C6orf223Q8N319 242 aa13.07□□□□□ -0.32
LIN54-209ENST00000510557 TRBV7-6A0A0J9YX20 115 aa13.06□□□□□ -0.32
LIN54-209ENST00000510557 MUC7Q8TAX7 377 aa13.06□□□□□ -0.32
LIN54-209ENST00000510557 ANK3Q12955 4377 aaKnown RBP13.06□□□□□ -0.32
LIN54-209ENST00000510557 DAD1P61803 113 aa13.06□□□□□ -0.32
LIN54-209ENST00000510557 PKIGQ9Y2B9 76 aa13.05□□□□□ -0.32
LIN54-209ENST00000510557 M0R2N4 97 aa13.05□□□□□ -0.32
LIN54-209ENST00000510557 PDZD2O15018 2839 aa13.04□□□□□ -0.32
LIN54-209ENST00000510557 NIPBLQ6KC79 2804 aaeCLIP13.04□□□□□ -0.32
LIN54-209ENST00000510557 SETD2Q9BYW2 2564 aaPredicted RBP13.04□□□□□ -0.32
LIN54-209ENST00000510557 DEFB135Q30KP9 77 aa13.04□□□□□ -0.32
LIN54-209ENST00000510557 J3QKU1 62 aa13.03□□□□□ -0.32
LIN54-209ENST00000510557 PDE6GP18545 87 aa13.02□□□□□ -0.32
LIN54-209ENST00000510557 Q8N3U1 123 aa13.02□□□□□ -0.32
LIN54-209ENST00000510557 MIFP14174 115 aa13.01□□□□□ -0.33
LIN54-209ENST00000510557 LINC00474Q9P2X8 69 aa13.01□□□□□ -0.33
LIN54-209ENST00000510557 IGLV10-54A0A075B6I4 117 aa13.01□□□□□ -0.33
LIN54-209ENST00000510557 TRBV7-4A0A0J9YYF1 115 aa13□□□□□ -0.33
LIN54-209ENST00000510557 TM2D3Q9BRN9 247 aa13□□□□□ -0.33
LIN54-209ENST00000510557 F8WDY8 70 aa13□□□□□ -0.33
LIN54-209ENST00000510557 DEFB4AO15263 64 aa12.99□□□□□ -0.33
LIN54-209ENST00000510557 SMR3AQ99954 134 aa12.99□□□□□ -0.33
LIN54-209ENST00000510557 LELP1Q5T871 98 aa12.99□□□□□ -0.33
LIN54-209ENST00000510557 ACANP16112 2415 aa12.98□□□□□ -0.33
LIN54-209ENST00000510557 BRK1Q8WUW1 75 aa12.98□□□□□ -0.33
LIN54-209ENST00000510557 SPART-AS1P0CW21 52 aa12.97□□□□□ -0.33
LIN54-209ENST00000510557 H3BQ85 93 aa12.97□□□□□ -0.33
LIN54-209ENST00000510557 MTORP42345 2549 aa12.96□□□□□ -0.34
LIN54-209ENST00000510557 Q8NAQ8 132 aa12.96□□□□□ -0.34
LIN54-209ENST00000510557 SPAG11BQ08648 103 aa12.95□□□□□ -0.34
LIN54-209ENST00000510557 NREPQ16612 68 aa12.95□□□□□ -0.34
LIN54-209ENST00000510557 C9orf116Q5BN46 136 aaPredicted RBP12.95□□□□□ -0.34
LIN54-209ENST00000510557 A0A0J9YWU9 116 aa12.94□□□□□ -0.34
LIN54-209ENST00000510557 IGHV4-30-4P0DP06 118 aa12.94□□□□□ -0.34
LIN54-209ENST00000510557 Q8NDZ9 215 aa12.93□□□□□ -0.34
LIN54-209ENST00000510557 Q6ZQY7 126 aa12.93□□□□□ -0.34
LIN54-209ENST00000510557 SCXQ7RTU7 201 aa12.93□□□□□ -0.34
LIN54-209ENST00000510557 TMEM254Q8TBM7 123 aa12.93□□□□□ -0.34
LIN54-209ENST00000510557 TENM4Q6N022 2769 aa12.93□□□□□ -0.34
LIN54-209ENST00000510557 PRR34Q9NV39 138 aa12.92□□□□□ -0.34
LIN54-209ENST00000510557 CELA1Q9UNI1 258 aa12.92□□□□□ -0.34
LIN54-209ENST00000510557 ERC2-IT1O76042 136 aa12.92□□□□□ -0.34
LIN54-209ENST00000510557 SPATA3Q8NHX4 192 aa12.92□□□□□ -0.34
LIN54-209ENST00000510557 HIVEP2P31629 2446 aa12.92□□□□□ -0.34
LIN54-209ENST00000510557 UNQ6190/PRO20217Q6UXQ8 127 aa12.91□□□□□ -0.34
LIN54-209ENST00000510557 FN1P02751 2386 aaKnown RBP12.9□□□□□ -0.34
LIN54-209ENST00000510557 GVQW2A0A096LPI5 108 aaPredicted RBP12.9□□□□□ -0.35
LIN54-209ENST00000510557 CYSRT1A8MQ03 144 aa12.9□□□□□ -0.35
LIN54-209ENST00000510557 BPY2O14599 106 aa12.9□□□□□ -0.35
LIN54-209ENST00000510557 C1orf195Q5TG92 126 aa12.9□□□□□ -0.35
LIN54-209ENST00000510557 HTN3P15516 51 aa12.89□□□□□ -0.35
LIN54-209ENST00000510557 A0A0U1RQV1 116 aa12.88□□□□□ -0.35
LIN54-209ENST00000510557 C10orf25Q5T742 122 aa12.88□□□□□ -0.35
LIN54-209ENST00000510557 KLK12Q9UKR0 248 aa12.88□□□□□ -0.35
LIN54-209ENST00000510557 IGLV6-57P01721 117 aa12.87□□□□□ -0.35
LIN54-209ENST00000510557 FAM229BQ4G0N7 80 aa12.86□□□□□ -0.35
LIN54-209ENST00000510557 MPLKIPQ8TAP9 179 aa12.86□□□□□ -0.35
LIN54-209ENST00000510557 V9GYY9 64 aa12.86□□□□□ -0.35
LIN54-209ENST00000510557 GCN1Q92616 2671 aaKnown RBP12.84□□□□□ -0.35
LIN54-209ENST00000510557 PRYO14603 147 aa12.84□□□□□ -0.35
LIN54-209ENST00000510557 INAFM1C9JVW0 142 aa12.83□□□□□ -0.36
LIN54-209ENST00000510557 ITPR2Q14571 2701 aa12.83□□□□□ -0.36
LIN54-209ENST00000510557 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.82□□□□□ -0.36
LIN54-209ENST00000510557 FUSP35637 526 aaKnown RBP eCLIP12.81□□□□□ -0.36
LIN54-209ENST00000510557 ESRGQ1W209 222 aa12.81□□□□□ -0.36
LIN54-209ENST00000510557 DIRC1Q969H9 104 aa12.81□□□□□ -0.36
LIN54-209ENST00000510557 H3BNG1 76 aa12.79□□□□□ -0.36
LIN54-209ENST00000510557 C6orf48Q9UBA6 75 aa12.79□□□□□ -0.36
LIN54-209ENST00000510557 NBEAL2Q6ZNJ1 2754 aa12.79□□□□□ -0.36
LIN54-209ENST00000510557 COX7BP24311 80 aa12.78□□□□□ -0.36
LIN54-209ENST00000510557 UNC79Q9P2D8 2635 aa12.78□□□□□ -0.36
LIN54-209ENST00000510557 SEC61GP60059 68 aa12.77□□□□□ -0.36
LIN54-209ENST00000510557 OCR1Q9BZK8 76 aa12.77□□□□□ -0.36
LIN54-209ENST00000510557 IGKV4-1P06312 121 aa12.76□□□□□ -0.37
LIN54-209ENST00000510557 Q6ZTC4 211 aa12.75□□□□□ -0.37
LIN54-209ENST00000510557 Q8N9L7 120 aa12.75□□□□□ -0.37
LIN54-209ENST00000510557 CAMK2N2Q96S95 79 aa12.73□□□□□ -0.37
LIN54-209ENST00000510557 ZNF73O43830 326 aaPredicted RBP12.73□□□□□ -0.37
LIN54-209ENST00000510557 EGFEM1PQ0D2K5 195 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms