RNA–Protein interactions for RNA: ENST00000510331.1

LSM6-206, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-206ENST00000510331 KRTAP13-1Q8IUC0 172 aa11.07□□□□□ -0.64
LSM6-206ENST00000510331 LINC00158P58513 81 aa11.06□□□□□ -0.64
LSM6-206ENST00000510331 TMEM238C9JI98 176 aa11.05□□□□□ -0.64
LSM6-206ENST00000510331 RPL13AP40429 203 aaKnown RBP11.04□□□□□ -0.64
LSM6-206ENST00000510331 UBE2AP49459 152 aa11.04□□□□□ -0.64
LSM6-206ENST00000510331 TSPEAR-AS2P59090 65 aa11.04□□□□□ -0.64
LSM6-206ENST00000510331 RPL24P83731 157 aaKnown RBP11.04□□□□□ -0.64
LSM6-206ENST00000510331 SMIM13P0DJ93 91 aa11.03□□□□□ -0.64
LSM6-206ENST00000510331 FABP4P15090 132 aa11.03□□□□□ -0.64
LSM6-206ENST00000510331 PRLHP81277 87 aa11.03□□□□□ -0.64
LSM6-206ENST00000510331 A0A087X002 238 aa11.02□□□□□ -0.65
LSM6-206ENST00000510331 MEIG1Q5JSS6 88 aa11.02□□□□□ -0.65
LSM6-206ENST00000510331 PMCHL2Q9BQD1 86 aa11.02□□□□□ -0.65
LSM6-206ENST00000510331 TMEM126AQ9H061 195 aa11.02□□□□□ -0.65
LSM6-206ENST00000510331 NDUFA12Q9UI09 145 aa11.01□□□□□ -0.65
LSM6-206ENST00000510331 HSPB8Q9UJY1 196 aa11.01□□□□□ -0.65
LSM6-206ENST00000510331 M0R378 163 aa11□□□□□ -0.65
LSM6-206ENST00000510331 PLNP26678 52 aa11□□□□□ -0.65
LSM6-206ENST00000510331 RNF213Q63HN8 5207 aa11□□□□□ -0.65
LSM6-206ENST00000510331 HERV-K104P63124 156 aa10.99□□□□□ -0.65
LSM6-206ENST00000510331 FAM19A1Q7Z5A9 133 aa10.99□□□□□ -0.65
LSM6-206ENST00000510331 MIR7-3HGQ8N6C7 128 aa10.99□□□□□ -0.65
LSM6-206ENST00000510331 ANAPC11Q9NYG5 84 aa10.99□□□□□ -0.65
LSM6-206ENST00000510331 LPAP08519 4548 aa10.99□□□□□ -0.65
LSM6-206ENST00000510331 NCR3O14931 201 aa10.97□□□□□ -0.65
LSM6-206ENST00000510331 LEPROTO15243 131 aa10.97□□□□□ -0.65
LSM6-206ENST00000510331 ATP6V1G1O75348 118 aa10.97□□□□□ -0.65
LSM6-206ENST00000510331 DPM2O94777 84 aa10.97□□□□□ -0.65
LSM6-206ENST00000510331 BOD1L2Q8IYS8 172 aa10.97□□□□□ -0.65
LSM6-206ENST00000510331 MYMXA0A1B0GTQ4 84 aa10.96□□□□□ -0.65
LSM6-206ENST00000510331 HIST1H2BKO60814 126 aa10.95□□□□□ -0.66
LSM6-206ENST00000510331 IGKCP01834 107 aa10.95□□□□□ -0.66
LSM6-206ENST00000510331 HIST1H2BJP06899 126 aa10.95□□□□□ -0.66
LSM6-206ENST00000510331 CRYGAP11844 174 aa10.95□□□□□ -0.66
LSM6-206ENST00000510331 HIST1H2BOP23527 126 aa10.95□□□□□ -0.66
LSM6-206ENST00000510331 HIST1H2BBP33778 126 aa10.95□□□□□ -0.66
LSM6-206ENST00000510331 HIST1H2BDP58876 126 aa10.95□□□□□ -0.66
LSM6-206ENST00000510331 HIST1H2BCP62807 126 aa10.95□□□□□ -0.66
LSM6-206ENST00000510331 HIST2H2BEQ16778 126 aa10.95□□□□□ -0.66
LSM6-206ENST00000510331 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.95□□□□□ -0.66
LSM6-206ENST00000510331 HIST1H2BHQ93079 126 aa10.95□□□□□ -0.66
LSM6-206ENST00000510331 PLEKHB2Q96CS7 222 aa10.95□□□□□ -0.66
LSM6-206ENST00000510331 HIST1H2BNQ99877 126 aa10.95□□□□□ -0.66
LSM6-206ENST00000510331 HIST1H2BMQ99879 126 aa10.95□□□□□ -0.66
LSM6-206ENST00000510331 DAND5Q8N907 189 aa10.94□□□□□ -0.66
LSM6-206ENST00000510331 J3QQQ9 107 aa10.93□□□□□ -0.66
LSM6-206ENST00000510331 HERVK_113P61574 105 aa10.93□□□□□ -0.66
LSM6-206ENST00000510331 KRTAP13-2Q52LG2 175 aa10.93□□□□□ -0.66
LSM6-206ENST00000510331 TYMSOSQ8TAI1 123 aa10.92□□□□□ -0.66
LSM6-206ENST00000510331 MAP1LC3CQ9BXW4 147 aa10.92□□□□□ -0.66
LSM6-206ENST00000510331 LINC00587B1AMM8 73 aa10.9□□□□□ -0.66
LSM6-206ENST00000510331 LGALS3P17931 250 aaKnown RBP10.9□□□□□ -0.66
LSM6-206ENST00000510331 HIGD2AQ9BW72 106 aa10.9□□□□□ -0.66
LSM6-206ENST00000510331 PRYO14603 147 aa10.89□□□□□ -0.67
LSM6-206ENST00000510331 TSPAN13O95857 204 aa10.89□□□□□ -0.67
LSM6-206ENST00000510331 FAM229BQ4G0N7 80 aa10.89□□□□□ -0.67
LSM6-206ENST00000510331 LCE2DQ5TA82 110 aaPredicted RBP10.89□□□□□ -0.67
LSM6-206ENST00000510331 NMUP48645 174 aa10.88□□□□□ -0.67
LSM6-206ENST00000510331 IGKV2D-26A0A0A0MRZ7 120 aa10.87□□□□□ -0.67
LSM6-206ENST00000510331 TRBV10-3A0A0K0K1G6 114 aa10.87□□□□□ -0.67
LSM6-206ENST00000510331 SYS1-DBNDD2H3BUS1 97 aa10.87□□□□□ -0.67
LSM6-206ENST00000510331 PRR4Q16378 134 aa10.86□□□□□ -0.67
LSM6-206ENST00000510331 E9PLD3 99 aa10.85□□□□□ -0.67
LSM6-206ENST00000510331 SPRR1AP35321 89 aa10.85□□□□□ -0.67
LSM6-206ENST00000510331 KCNQ1DNQ9H478 68 aa10.85□□□□□ -0.67
LSM6-206ENST00000510331 LOC107984156A0A0G2JMH3 177 aa10.84□□□□□ -0.67
LSM6-206ENST00000510331 ARL17AQ8IVW1 177 aa10.84□□□□□ -0.67
LSM6-206ENST00000510331 A0A0J9YXY3 114 aa10.82□□□□□ -0.68
LSM6-206ENST00000510331 KRTAP4-16G5E9R7 235 aaPredicted RBP10.82□□□□□ -0.68
LSM6-206ENST00000510331 NPC2P61916 151 aa10.82□□□□□ -0.68
LSM6-206ENST00000510331 LINC01545Q5VT33 79 aa10.82□□□□□ -0.68
LSM6-206ENST00000510331 LINC00337Q8N6G1 96 aa10.82□□□□□ -0.68
LSM6-206ENST00000510331 SPRR4Q96PI1 79 aa10.82□□□□□ -0.68
LSM6-206ENST00000510331 MIEN1Q9BRT3 115 aa10.82□□□□□ -0.68
LSM6-206ENST00000510331 ETDCA0A1B0GVM5 59 aa10.81□□□□□ -0.68
LSM6-206ENST00000510331 EIF4EBP3O60516 100 aaPredicted RBP10.81□□□□□ -0.68
LSM6-206ENST00000510331 SOSTDC1Q6X4U4 206 aa10.81□□□□□ -0.68
LSM6-206ENST00000510331 C3orf22Q8N5N4 141 aa10.81□□□□□ -0.68
LSM6-206ENST00000510331 LINC00304Q8N9R0 145 aa10.81□□□□□ -0.68
LSM6-206ENST00000510331 SPANXB1Q9NS25 103 aaPredicted RBP10.81□□□□□ -0.68
LSM6-206ENST00000510331 DDTP30046 118 aa10.8□□□□□ -0.68
LSM6-206ENST00000510331 ADAMTSL4-AS1Q5T5F5 129 aa10.8□□□□□ -0.68
LSM6-206ENST00000510331 TRBV10-2A0A0K0K1G8 114 aa10.79□□□□□ -0.68
LSM6-206ENST00000510331 PET117Q6UWS5 81 aa10.79□□□□□ -0.68
LSM6-206ENST00000510331 SMCR5Q8TEV8 140 aa10.79□□□□□ -0.68
LSM6-206ENST00000510331 C3orf79P0CE67 100 aa10.78□□□□□ -0.68
LSM6-206ENST00000510331 COA6Q5JTJ3 125 aaKnown RBP10.78□□□□□ -0.68
LSM6-206ENST00000510331 ZNF706Q9Y5V0 76 aaPredicted RBP10.77□□□□□ -0.69
LSM6-206ENST00000510331 B5MCH6 92 aa10.76□□□□□ -0.69
LSM6-206ENST00000510331 NDUFC2O95298 119 aa10.76□□□□□ -0.69
LSM6-206ENST00000510331 KRTDAPP60985 99 aa10.76□□□□□ -0.69
LSM6-206ENST00000510331 S100A12P80511 92 aa10.76□□□□□ -0.69
LSM6-206ENST00000510331 LITAFQ99732 161 aa10.76□□□□□ -0.69
LSM6-206ENST00000510331 RETNLBQ9BQ08 111 aa10.76□□□□□ -0.69
LSM6-206ENST00000510331 TTTY13Q9BZ97 58 aa10.76□□□□□ -0.69
LSM6-206ENST00000510331 IGLV6-57P01721 117 aa10.75□□□□□ -0.69
LSM6-206ENST00000510331 S100A7L2Q5SY68 101 aa10.74□□□□□ -0.69
LSM6-206ENST00000510331 PPDPFQ9H3Y8 114 aa10.74□□□□□ -0.69
LSM6-206ENST00000510331 ZNF815PA8K554 130 aa10.73□□□□□ -0.69
LSM6-206ENST00000510331 TRAV23DV6A0A075B6W5 121 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms