RNA–Protein interactions for RNA: ENST00000509618.1

HTT-206, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-206ENST00000509618 PFN2P35080 140 aa2.97□□□□□ -1.93
HTT-206ENST00000509618 SRSF9Q13242 221 aaKnown RBP eCLIP2.97□□□□□ -1.93
HTT-206ENST00000509618 LBHQ53QV2 105 aaPredicted RBP2.97□□□□□ -1.93
HTT-206ENST00000509618 SFTA2Q6UW10 78 aa2.97□□□□□ -1.93
HTT-206ENST00000509618 PRR26Q8N8Z3 221 aa2.97□□□□□ -1.93
HTT-206ENST00000509618 NKAPP1Q8N9T2 125 aa2.97□□□□□ -1.93
HTT-206ENST00000509618 ZNF625Q96I27 306 aaPredicted RBP2.97□□□□□ -1.93
HTT-206ENST00000509618 KRTAP4-1Q9BYQ7 146 aa2.97□□□□□ -1.93
HTT-206ENST00000509618 HSPB8Q9UJY1 196 aa2.97□□□□□ -1.93
HTT-206ENST00000509618 LOC100996750A0A140TA64 210 aa2.96□□□□□ -1.94
HTT-206ENST00000509618 GAGE10A6NGK3 116 aa2.96□□□□□ -1.94
HTT-206ENST00000509618 ATP6V1G1O75348 118 aa2.96□□□□□ -1.94
HTT-206ENST00000509618 SCO1O75880 301 aa2.96□□□□□ -1.94
HTT-206ENST00000509618 IGLV7-43P04211 117 aa2.96□□□□□ -1.94
HTT-206ENST00000509618 FABP4P15090 132 aa2.96□□□□□ -1.94
HTT-206ENST00000509618 MRPL55Q7Z7F7 128 aaKnown RBP2.96□□□□□ -1.94
HTT-206ENST00000509618 DIRC1Q969H9 104 aa2.96□□□□□ -1.94
HTT-206ENST00000509618 KRTAP4-6Q9BYQ5 205 aa2.96□□□□□ -1.94
HTT-206ENST00000509618 ERG28Q9UKR5 140 aa2.96□□□□□ -1.94
HTT-206ENST00000509618 C22orf24Q9Y442 160 aa2.96□□□□□ -1.94
HTT-206ENST00000509618 A0A0U1RRA0 63 aa2.95□□□□□ -1.94
HTT-206ENST00000509618 TMEM223A0PJW6 202 aa2.95□□□□□ -1.94
HTT-206ENST00000509618 PLNP26678 52 aa2.95□□□□□ -1.94
HTT-206ENST00000509618 LINC00158P58513 81 aa2.95□□□□□ -1.94
HTT-206ENST00000509618 HERVK_113P61574 105 aa2.95□□□□□ -1.94
HTT-206ENST00000509618 COX17Q14061 63 aa2.95□□□□□ -1.94
HTT-206ENST00000509618 MEIG1Q5JSS6 88 aa2.95□□□□□ -1.94
HTT-206ENST00000509618 KRTAP7-1Q8IUC3 87 aa2.95□□□□□ -1.94
HTT-206ENST00000509618 MAP1LC3CQ9BXW4 147 aa2.95□□□□□ -1.94
HTT-206ENST00000509618 TP73-AS1Q9UF72 201 aa2.95□□□□□ -1.94
HTT-206ENST00000509618 RPL37AP8A6NKH3 93 aa2.94□□□□□ -1.94
HTT-206ENST00000509618 NUPR1O60356 82 aa2.94□□□□□ -1.94
HTT-206ENST00000509618 DPM2O94777 84 aa2.94□□□□□ -1.94
HTT-206ENST00000509618 RPL24P83731 157 aaKnown RBP2.94□□□□□ -1.94
HTT-206ENST00000509618 KRTAP11-1Q8IUC1 163 aa2.94□□□□□ -1.94
HTT-206ENST00000509618 SND1-IT1Q9HBX3 110 aa2.94□□□□□ -1.94
HTT-206ENST00000509618 IGKV2-28A0A075B6P5 120 aa2.93□□□□□ -1.94
HTT-206ENST00000509618 MYMXA0A1B0GTQ4 84 aa2.93□□□□□ -1.94
HTT-206ENST00000509618 LINC00587B1AMM8 73 aa2.93□□□□□ -1.94
HTT-206ENST00000509618 H0Y9J4 135 aa2.93□□□□□ -1.94
HTT-206ENST00000509618 HIST1H2BKO60814 126 aa2.93□□□□□ -1.94
HTT-206ENST00000509618 IGKV2D-28P01615 120 aa2.93□□□□□ -1.94
HTT-206ENST00000509618 IGKCP01834 107 aa2.93□□□□□ -1.94
HTT-206ENST00000509618 HIST1H2BJP06899 126 aa2.93□□□□□ -1.94
HTT-206ENST00000509618 LGALS3P17931 250 aaKnown RBP2.93□□□□□ -1.94
HTT-206ENST00000509618 HIST1H2BOP23527 126 aa2.93□□□□□ -1.94
HTT-206ENST00000509618 HIST1H2BBP33778 126 aa2.93□□□□□ -1.94
HTT-206ENST00000509618 RPL28P46779 137 aaKnown RBP2.93□□□□□ -1.94
HTT-206ENST00000509618 UBE2AP49459 152 aa2.93□□□□□ -1.94
HTT-206ENST00000509618 HIST1H2BDP58876 126 aa2.93□□□□□ -1.94
HTT-206ENST00000509618 HIST1H2BCP62807 126 aa2.93□□□□□ -1.94
HTT-206ENST00000509618 HERV-K104P63124 156 aa2.93□□□□□ -1.94
HTT-206ENST00000509618 HIST2H2BEQ16778 126 aa2.93□□□□□ -1.94
HTT-206ENST00000509618 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.93□□□□□ -1.94
HTT-206ENST00000509618 HIST1H2BHQ93079 126 aa2.93□□□□□ -1.94
HTT-206ENST00000509618 PLEKHB2Q96CS7 222 aa2.93□□□□□ -1.94
HTT-206ENST00000509618 LINC00167Q96N53 147 aa2.93□□□□□ -1.94
HTT-206ENST00000509618 HIST1H2BNQ99877 126 aa2.93□□□□□ -1.94
HTT-206ENST00000509618 HIST1H2BMQ99879 126 aa2.93□□□□□ -1.94
HTT-206ENST00000509618 PMCHL2Q9BQD1 86 aa2.93□□□□□ -1.94
HTT-206ENST00000509618 NDUFA12Q9UI09 145 aa2.93□□□□□ -1.94
HTT-206ENST00000509618 IGLV5-37A0A075B6J1 123 aa2.92□□□□□ -1.94
HTT-206ENST00000509618 LEPROTO15243 131 aa2.92□□□□□ -1.94
HTT-206ENST00000509618 ZNF861PO60384 105 aa2.92□□□□□ -1.94
HTT-206ENST00000509618 BCE1O60756 84 aa2.92□□□□□ -1.94
HTT-206ENST00000509618 SMIM13P0DJ93 91 aa2.92□□□□□ -1.94
HTT-206ENST00000509618 VPREB1P12018 145 aa2.92□□□□□ -1.94
HTT-206ENST00000509618 BOD1L2Q8IYS8 172 aa2.92□□□□□ -1.94
HTT-206ENST00000509618 SYS1-DBNDD2H3BUS1 97 aa2.91□□□□□ -1.94
HTT-206ENST00000509618 J3QQQ9 107 aa2.91□□□□□ -1.94
HTT-206ENST00000509618 NMUP48645 174 aa2.91□□□□□ -1.94
HTT-206ENST00000509618 TSPEAR-AS2P59090 65 aa2.91□□□□□ -1.94
HTT-206ENST00000509618 MIR7-3HGQ8N6C7 128 aa2.91□□□□□ -1.94
HTT-206ENST00000509618 MIEN1Q9BRT3 115 aa2.91□□□□□ -1.94
HTT-206ENST00000509618 SSPOA2VEC9 5147 aa2.91□□□□□ -1.94
HTT-206ENST00000509618 IGLV1-50A0A075B6I6 118 aa2.9□□□□□ -1.95
HTT-206ENST00000509618 C20orf202A1L168 122 aa2.9□□□□□ -1.95
HTT-206ENST00000509618 TMEM238C9JI98 176 aa2.9□□□□□ -1.95
HTT-206ENST00000509618 M0R378 163 aa2.9□□□□□ -1.95
HTT-206ENST00000509618 NCR3O14931 201 aa2.9□□□□□ -1.95
HTT-206ENST00000509618 KRTAP1-4P0C5Y4 121 aa2.9□□□□□ -1.95
HTT-206ENST00000509618 S100A1P23297 94 aa2.9□□□□□ -1.95
HTT-206ENST00000509618 RPL13AP40429 203 aaKnown RBP2.9□□□□□ -1.95
HTT-206ENST00000509618 KRTDAPP60985 99 aa2.9□□□□□ -1.95
HTT-206ENST00000509618 S100A12P80511 92 aa2.9□□□□□ -1.95
HTT-206ENST00000509618 PRLHP81277 87 aa2.9□□□□□ -1.95
HTT-206ENST00000509618 KRTAP19-2Q3LHN2 52 aa2.9□□□□□ -1.95
HTT-206ENST00000509618 PET117Q6UWS5 81 aa2.9□□□□□ -1.95
HTT-206ENST00000509618 FAM19A1Q7Z5A9 133 aa2.9□□□□□ -1.95
HTT-206ENST00000509618 DAND5Q8N907 189 aa2.9□□□□□ -1.95
HTT-206ENST00000509618 TMEM126AQ9H061 195 aa2.9□□□□□ -1.95
HTT-206ENST00000509618 IGKV2D-26A0A0A0MRZ7 120 aa2.89□□□□□ -1.95
HTT-206ENST00000509618 E9PLD3 99 aa2.89□□□□□ -1.95
HTT-206ENST00000509618 LINC01545Q5VT33 79 aa2.89□□□□□ -1.95
HTT-206ENST00000509618 Q8NDZ9 215 aa2.89□□□□□ -1.95
HTT-206ENST00000509618 RETNLBQ9BQ08 111 aa2.89□□□□□ -1.95
HTT-206ENST00000509618 FCGBPQ9Y6R7 5405 aaPredicted RBP2.89□□□□□ -1.95
HTT-206ENST00000509618 USH2AO75445 5202 aa2.88□□□□□ -1.95
HTT-206ENST00000509618 PRYO14603 147 aa2.88□□□□□ -1.95
HTT-206ENST00000509618 TSPAN13O95857 204 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms