RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 TRGC2P03986 189 aa10.55□□□□□ -0.72
TPM3-220ENST00000509601 CRYGAP11844 174 aa10.55□□□□□ -0.72
TPM3-220ENST00000509601 LINC00158P58513 81 aa10.55□□□□□ -0.72
TPM3-220ENST00000509601 TMEM126AQ9H061 195 aa10.55□□□□□ -0.72
TPM3-220ENST00000509601 M0R378 163 aa10.54□□□□□ -0.72
TPM3-220ENST00000509601 A0A0U1RRA0 63 aa10.53□□□□□ -0.72
TPM3-220ENST00000509601 HSBP1O75506 76 aa10.53□□□□□ -0.72
TPM3-220ENST00000509601 LINC00310P59036 64 aa10.53□□□□□ -0.72
TPM3-220ENST00000509601 PRLHP81277 87 aa10.53□□□□□ -0.72
TPM3-220ENST00000509601 KRTAP13-2Q52LG2 175 aa10.53□□□□□ -0.72
TPM3-220ENST00000509601 TYMSOSQ8TAI1 123 aa10.53□□□□□ -0.72
TPM3-220ENST00000509601 TSPAN13O95857 204 aa10.52□□□□□ -0.73
TPM3-220ENST00000509601 FAM19A1Q7Z5A9 133 aa10.52□□□□□ -0.73
TPM3-220ENST00000509601 SMIM13P0DJ93 91 aa10.51□□□□□ -0.73
TPM3-220ENST00000509601 PRR4Q16378 134 aa10.5□□□□□ -0.73
TPM3-220ENST00000509601 SLC7A5P1Q8MH63 180 aa10.5□□□□□ -0.73
TPM3-220ENST00000509601 FAM229BQ4G0N7 80 aa10.49□□□□□ -0.73
TPM3-220ENST00000509601 SERF1AO75920 110 aa10.48□□□□□ -0.73
TPM3-220ENST00000509601 PLEKHB2Q96CS7 222 aa10.48□□□□□ -0.73
TPM3-220ENST00000509601 MUC2Q02817 5179 aa10.48□□□□□ -0.73
TPM3-220ENST00000509601 COLCA2A8K830 154 aa10.47□□□□□ -0.73
TPM3-220ENST00000509601 LEPROTL1O95214 131 aa10.47□□□□□ -0.73
TPM3-220ENST00000509601 H0Y8G0 127 aa10.46□□□□□ -0.73
TPM3-220ENST00000509601 HERV-K104P63124 156 aa10.46□□□□□ -0.73
TPM3-220ENST00000509601 MIR7-3HGQ8N6C7 128 aa10.46□□□□□ -0.73
TPM3-220ENST00000509601 NDUFA12Q9UI09 145 aa10.46□□□□□ -0.73
TPM3-220ENST00000509601 MEIG1Q5JSS6 88 aa10.45□□□□□ -0.74
TPM3-220ENST00000509601 BOD1L2Q8IYS8 172 aa10.45□□□□□ -0.74
TPM3-220ENST00000509601 ATP6V1G1O75348 118 aa10.44□□□□□ -0.74
TPM3-220ENST00000509601 TSPEAR-AS2P59090 65 aa10.44□□□□□ -0.74
TPM3-220ENST00000509601 MYMXA0A1B0GTQ4 84 aa10.43□□□□□ -0.74
TPM3-220ENST00000509601 LINC00587B1AMM8 73 aa10.42□□□□□ -0.74
TPM3-220ENST00000509601 LEPROTO15243 131 aa10.42□□□□□ -0.74
TPM3-220ENST00000509601 FABP4P15090 132 aa10.42□□□□□ -0.74
TPM3-220ENST00000509601 IGKV2D-26A0A0A0MRZ7 120 aa10.41□□□□□ -0.74
TPM3-220ENST00000509601 HIGD2AQ9BW72 106 aa10.41□□□□□ -0.74
TPM3-220ENST00000509601 KCNQ1DNQ9H478 68 aa10.41□□□□□ -0.74
TPM3-220ENST00000509601 LOC107984156A0A0G2JMH3 177 aa10.4□□□□□ -0.74
TPM3-220ENST00000509601 NCR3O14931 201 aa10.4□□□□□ -0.74
TPM3-220ENST00000509601 SPRR1AP35321 89 aa10.4□□□□□ -0.74
TPM3-220ENST00000509601 ARL17AQ8IVW1 177 aa10.4□□□□□ -0.74
TPM3-220ENST00000509601 LINC00304Q8N9R0 145 aa10.4□□□□□ -0.74
TPM3-220ENST00000509601 PMCHL2Q9BQD1 86 aa10.4□□□□□ -0.74
TPM3-220ENST00000509601 HSPB8Q9UJY1 196 aa10.4□□□□□ -0.74
TPM3-220ENST00000509601 MUC17Q685J3 4493 aa10.4□□□□□ -0.74
TPM3-220ENST00000509601 KRTAP4-16G5E9R7 235 aaPredicted RBP10.39□□□□□ -0.75
TPM3-220ENST00000509601 PLNP26678 52 aa10.39□□□□□ -0.75
TPM3-220ENST00000509601 C3orf22Q8N5N4 141 aa10.39□□□□□ -0.75
TPM3-220ENST00000509601 J3QQQ9 107 aa10.38□□□□□ -0.75
TPM3-220ENST00000509601 PRYO14603 147 aa10.38□□□□□ -0.75
TPM3-220ENST00000509601 DPM2O94777 84 aa10.38□□□□□ -0.75
TPM3-220ENST00000509601 LINC00337Q8N6G1 96 aa10.38□□□□□ -0.75
TPM3-220ENST00000509601 DAND5Q8N907 189 aa10.38□□□□□ -0.75
TPM3-220ENST00000509601 SPRR4Q96PI1 79 aa10.38□□□□□ -0.75
TPM3-220ENST00000509601 MAP1LC3CQ9BXW4 147 aa10.38□□□□□ -0.75
TPM3-220ENST00000509601 TRBV10-3A0A0K0K1G6 114 aa10.37□□□□□ -0.75
TPM3-220ENST00000509601 IGKCP01834 107 aa10.36□□□□□ -0.75
TPM3-220ENST00000509601 SMCR5Q8TEV8 140 aa10.35□□□□□ -0.75
TPM3-220ENST00000509601 RETNLBQ9BQ08 111 aa10.35□□□□□ -0.75
TPM3-220ENST00000509601 NMUP48645 174 aa10.33□□□□□ -0.76
TPM3-220ENST00000509601 HERVK_113P61574 105 aa10.33□□□□□ -0.76
TPM3-220ENST00000509601 CTAG1AP78358 180 aa10.33□□□□□ -0.76
TPM3-220ENST00000509601 TRBV10-2A0A0K0K1G8 114 aa10.31□□□□□ -0.76
TPM3-220ENST00000509601 ETDCA0A1B0GVM5 59 aa10.31□□□□□ -0.76
TPM3-220ENST00000509601 LGALS3P17931 250 aaKnown RBP10.31□□□□□ -0.76
TPM3-220ENST00000509601 B5MCH6 92 aa10.3□□□□□ -0.76
TPM3-220ENST00000509601 ADAMTSL4-AS1Q5T5F5 129 aa10.3□□□□□ -0.76
TPM3-220ENST00000509601 ZNF706Q9Y5V0 76 aaPredicted RBP10.3□□□□□ -0.76
TPM3-220ENST00000509601 EIF4EBP3O60516 100 aaPredicted RBP10.29□□□□□ -0.76
TPM3-220ENST00000509601 HIST1H2BKO60814 126 aa10.29□□□□□ -0.76
TPM3-220ENST00000509601 HIST1H2BJP06899 126 aa10.29□□□□□ -0.76
TPM3-220ENST00000509601 HIST1H2BOP23527 126 aa10.29□□□□□ -0.76
TPM3-220ENST00000509601 DDTP30046 118 aa10.29□□□□□ -0.76
TPM3-220ENST00000509601 HIST1H2BBP33778 126 aa10.29□□□□□ -0.76
TPM3-220ENST00000509601 HIST1H2BDP58876 126 aa10.29□□□□□ -0.76
TPM3-220ENST00000509601 HIST1H2BCP62807 126 aa10.29□□□□□ -0.76
TPM3-220ENST00000509601 HIST2H2BEQ16778 126 aa10.29□□□□□ -0.76
TPM3-220ENST00000509601 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.29□□□□□ -0.76
TPM3-220ENST00000509601 SOSTDC1Q6X4U4 206 aa10.29□□□□□ -0.76
TPM3-220ENST00000509601 HIST1H2BHQ93079 126 aa10.29□□□□□ -0.76
TPM3-220ENST00000509601 HIST1H2BNQ99877 126 aa10.29□□□□□ -0.76
TPM3-220ENST00000509601 HIST1H2BMQ99879 126 aa10.29□□□□□ -0.76
TPM3-220ENST00000509601 A0A0J9YXY3 114 aa10.28□□□□□ -0.76
TPM3-220ENST00000509601 E9PLD3 99 aa10.28□□□□□ -0.76
TPM3-220ENST00000509601 ERC2-IT1O76042 136 aa10.28□□□□□ -0.76
TPM3-220ENST00000509601 PPDPFQ9H3Y8 114 aa10.28□□□□□ -0.76
TPM3-220ENST00000509601 SYS1-DBNDD2H3BUS1 97 aa10.27□□□□□ -0.77
TPM3-220ENST00000509601 NDUFC2O95298 119 aa10.27□□□□□ -0.77
TPM3-220ENST00000509601 SPAG11AQ6PDA7 123 aa10.27□□□□□ -0.77
TPM3-220ENST00000509601 IGLV6-57P01721 117 aa10.26□□□□□ -0.77
TPM3-220ENST00000509601 LINC00483Q53H64 154 aa10.26□□□□□ -0.77
TPM3-220ENST00000509601 SPANXB1Q9NS25 103 aaPredicted RBP10.26□□□□□ -0.77
TPM3-220ENST00000509601 FAT4Q6V0I7 4981 aa10.25□□□□□ -0.77
TPM3-220ENST00000509601 IGLV7-46A0A075B6I9 117 aa10.25□□□□□ -0.77
TPM3-220ENST00000509601 S100A12P80511 92 aa10.25□□□□□ -0.77
TPM3-220ENST00000509601 Q9BRP9 147 aa10.25□□□□□ -0.77
TPM3-220ENST00000509601 NPC2P61916 151 aa10.24□□□□□ -0.77
TPM3-220ENST00000509601 MIEN1Q9BRT3 115 aa10.24□□□□□ -0.77
TPM3-220ENST00000509601 LINC01545Q5VT33 79 aa10.23□□□□□ -0.77
TPM3-220ENST00000509601 GAGE2AQ6NT46 116 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms