RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 PRLHP81277 87 aa9.01□□□□□ -0.97
TPM3-219ENST00000509409 FAM229BQ4G0N7 80 aa9.01□□□□□ -0.97
TPM3-219ENST00000509409 KRTAP13-2Q52LG2 175 aa9.01□□□□□ -0.97
TPM3-219ENST00000509409 URB1-AS1Q96HZ7 61 aa9.01□□□□□ -0.97
TPM3-219ENST00000509409 C11orf86A6NJI1 115 aa9□□□□□ -0.97
TPM3-219ENST00000509409 TMEM238C9JI98 176 aa9□□□□□ -0.97
TPM3-219ENST00000509409 TMEM126AQ9H061 195 aa9□□□□□ -0.97
TPM3-219ENST00000509409 LINC00158P58513 81 aa8.99□□□□□ -0.97
TPM3-219ENST00000509409 LINC00304Q8N9R0 145 aa8.99□□□□□ -0.97
TPM3-219ENST00000509409 SFTA2Q6UW10 78 aa8.98□□□□□ -0.97
TPM3-219ENST00000509409 CHTOPQ9Y3Y2 248 aaKnown RBP8.98□□□□□ -0.97
TPM3-219ENST00000509409 M0R378 163 aa8.97□□□□□ -0.97
TPM3-219ENST00000509409 CBLN2Q8IUK8 224 aa8.97□□□□□ -0.97
TPM3-219ENST00000509409 MUC2Q02817 5179 aa8.97□□□□□ -0.97
TPM3-219ENST00000509409 A0A0U1RQV1 116 aa8.96□□□□□ -0.98
TPM3-219ENST00000509409 A0A0U1RRA0 63 aa8.96□□□□□ -0.98
TPM3-219ENST00000509409 RETNLBQ9BQ08 111 aa8.96□□□□□ -0.98
TPM3-219ENST00000509409 ATP6V1G1O75348 118 aa8.95□□□□□ -0.98
TPM3-219ENST00000509409 APOC3P02656 99 aa8.95□□□□□ -0.98
TPM3-219ENST00000509409 Q8NDZ9 215 aa8.95□□□□□ -0.98
TPM3-219ENST00000509409 PLEKHB2Q96CS7 222 aa8.95□□□□□ -0.98
TPM3-219ENST00000509409 HIGD2AQ9BW72 106 aa8.94□□□□□ -0.98
TPM3-219ENST00000509409 NDUFA5Q16718 116 aa8.93□□□□□ -0.98
TPM3-219ENST00000509409 TMEM223A0PJW6 202 aa8.92□□□□□ -0.98
TPM3-219ENST00000509409 SNAPINO95295 136 aa8.92□□□□□ -0.98
TPM3-219ENST00000509409 IFI27L1Q96BM0 104 aa8.92□□□□□ -0.98
TPM3-219ENST00000509409 MEIG1Q5JSS6 88 aa8.91□□□□□ -0.98
TPM3-219ENST00000509409 SVBPQ8N300 66 aa8.91□□□□□ -0.98
TPM3-219ENST00000509409 C3orf22Q8N5N4 141 aa8.91□□□□□ -0.98
TPM3-219ENST00000509409 TRAV12-1A0A0B4J245 112 aa8.9□□□□□ -0.98
TPM3-219ENST00000509409 SMIM13P0DJ93 91 aa8.9□□□□□ -0.98
TPM3-219ENST00000509409 CHCHD1Q96BP2 118 aaKnown RBP8.9□□□□□ -0.98
TPM3-219ENST00000509409 CDIP1Q9H305 208 aa8.9□□□□□ -0.98
TPM3-219ENST00000509409 IGLV7-46A0A075B6I9 117 aa8.89□□□□□ -0.99
TPM3-219ENST00000509409 BOD1L2Q8IYS8 172 aa8.89□□□□□ -0.99
TPM3-219ENST00000509409 CTAG1AP78358 180 aa8.88□□□□□ -0.99
TPM3-219ENST00000509409 XP32Q5T750 250 aa8.88□□□□□ -0.99
TPM3-219ENST00000509409 NCR3O14931 201 aa8.87□□□□□ -0.99
TPM3-219ENST00000509409 SPRR4Q96PI1 79 aa8.87□□□□□ -0.99
TPM3-219ENST00000509409 ZNF706Q9Y5V0 76 aaPredicted RBP8.87□□□□□ -0.99
TPM3-219ENST00000509409 LINC00587B1AMM8 73 aa8.86□□□□□ -0.99
TPM3-219ENST00000509409 PRYO14603 147 aa8.86□□□□□ -0.99
TPM3-219ENST00000509409 HERV-K104P63124 156 aa8.86□□□□□ -0.99
TPM3-219ENST00000509409 SPAG11AQ6PDA7 123 aa8.86□□□□□ -0.99
TPM3-219ENST00000509409 MIR7-3HGQ8N6C7 128 aa8.86□□□□□ -0.99
TPM3-219ENST00000509409 H0Y8G0 127 aa8.85□□□□□ -0.99
TPM3-219ENST00000509409 MYMXA0A1B0GTQ4 84 aa8.84□□□□□ -0.99
TPM3-219ENST00000509409 ETDCA0A1B0GVM5 59 aa8.84□□□□□ -0.99
TPM3-219ENST00000509409 HSBP1O75506 76 aa8.84□□□□□ -0.99
TPM3-219ENST00000509409 TPRXLQ17RH7 258 aa8.84□□□□□ -0.99
TPM3-219ENST00000509409 FAM19A2Q8N3H0 131 aa8.84□□□□□ -0.99
TPM3-219ENST00000509409 SMCR5Q8TEV8 140 aa8.84□□□□□ -0.99
TPM3-219ENST00000509409 MAP1LC3CQ9BXW4 147 aa8.84□□□□□ -0.99
TPM3-219ENST00000509409 PPDPFQ9H3Y8 114 aa8.84□□□□□ -0.99
TPM3-219ENST00000509409 NDUFA12Q9UI09 145 aa8.84□□□□□ -0.99
TPM3-219ENST00000509409 S100A12P80511 92 aa8.83□□□□□ -1
TPM3-219ENST00000509409 KCNQ1DNQ9H478 68 aa8.83□□□□□ -1
TPM3-219ENST00000509409 LINC00337Q8N6G1 96 aa8.82□□□□□ -1
TPM3-219ENST00000509409 YPEL4Q96NS1 127 aa8.82□□□□□ -1
TPM3-219ENST00000509409 DAND5Q8N907 189 aa8.81□□□□□ -1
TPM3-219ENST00000509409 MUC17Q685J3 4493 aa8.81□□□□□ -1
TPM3-219ENST00000509409 TRBV10-3A0A0K0K1G6 114 aa8.8□□□□□ -1
TPM3-219ENST00000509409 Q8NBF4 154 aa8.8□□□□□ -1
TPM3-219ENST00000509409 SPRR1AP35321 89 aa8.79□□□□□ -1
TPM3-219ENST00000509409 LEPROTO15243 131 aa8.78□□□□□ -1
TPM3-219ENST00000509409 LEPROTL1O95214 131 aa8.78□□□□□ -1
TPM3-219ENST00000509409 FAT4Q6V0I7 4981 aa8.78□□□□□ -1
TPM3-219ENST00000509409 GAGE2AQ6NT46 116 aa8.77□□□□□ -1.01
TPM3-219ENST00000509409 FP248Q71RG6 208 aaPredicted RBP8.77□□□□□ -1.01
TPM3-219ENST00000509409 KRTAP4-16G5E9R7 235 aaPredicted RBP8.76□□□□□ -1.01
TPM3-219ENST00000509409 TRGC2P03986 189 aa8.76□□□□□ -1.01
TPM3-219ENST00000509409 DDTP30046 118 aa8.76□□□□□ -1.01
TPM3-219ENST00000509409 PLNP26678 52 aa8.75□□□□□ -1.01
TPM3-219ENST00000509409 TSPEAR-AS2P59090 65 aa8.75□□□□□ -1.01
TPM3-219ENST00000509409 HERVK_113P61574 105 aa8.75□□□□□ -1.01
TPM3-219ENST00000509409 IGLV9-49A0A0B4J1Y8 123 aa8.74□□□□□ -1.01
TPM3-219ENST00000509409 B5MCH6 92 aa8.74□□□□□ -1.01
TPM3-219ENST00000509409 J3QQQ9 107 aa8.74□□□□□ -1.01
TPM3-219ENST00000509409 SERF1AO75920 110 aa8.74□□□□□ -1.01
TPM3-219ENST00000509409 SPINK1P00995 79 aa8.74□□□□□ -1.01
TPM3-219ENST00000509409 FABP4P15090 132 aa8.74□□□□□ -1.01
TPM3-219ENST00000509409 MIEN1Q9BRT3 115 aa8.74□□□□□ -1.01
TPM3-219ENST00000509409 HSPB8Q9UJY1 196 aa8.74□□□□□ -1.01
TPM3-219ENST00000509409 TRBV10-2A0A0K0K1G8 114 aa8.73□□□□□ -1.01
TPM3-219ENST00000509409 DPM2O94777 84 aa8.73□□□□□ -1.01
TPM3-219ENST00000509409 LGALS3P17931 250 aaKnown RBP8.73□□□□□ -1.01
TPM3-219ENST00000509409 LINC00483Q53H64 154 aa8.73□□□□□ -1.01
TPM3-219ENST00000509409 S100A7L2Q5SY68 101 aa8.73□□□□□ -1.01
TPM3-219ENST00000509409 PMCHL2Q9BQD1 86 aa8.73□□□□□ -1.01
TPM3-219ENST00000509409 LOC107984156A0A0G2JMH3 177 aa8.72□□□□□ -1.01
TPM3-219ENST00000509409 ERC2-IT1O76042 136 aa8.72□□□□□ -1.01
TPM3-219ENST00000509409 ARL17AQ8IVW1 177 aa8.72□□□□□ -1.01
TPM3-219ENST00000509409 IGKCP01834 107 aa8.71□□□□□ -1.02
TPM3-219ENST00000509409 NMUP48645 174 aa8.71□□□□□ -1.02
TPM3-219ENST00000509409 MOBPQ13875 183 aa8.71□□□□□ -1.02
TPM3-219ENST00000509409 SSBP3-AS1Q7Z2R9 100 aa8.71□□□□□ -1.02
TPM3-219ENST00000509409 SPANXB1Q9NS25 103 aaPredicted RBP8.71□□□□□ -1.02
TPM3-219ENST00000509409 LINC00310P59036 64 aa8.69□□□□□ -1.02
TPM3-219ENST00000509409 NPC2P61916 151 aa8.69□□□□□ -1.02
TPM3-219ENST00000509409 NDUFC2O95298 119 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms